Clone BS15017 Report

Search the DGRC for BS15017

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:150
Well:17
Vector:pDNR-Dual
Associated Gene/TranscriptCG14906-RC
Protein status:BS15017.pep: full length peptide match
Sequenced Size:1112

Clone Sequence Records

BS15017.complete Sequence

1112 bp assembled on 2010-02-09

GenBank Submission: KX802915

> BS15017.complete
GAAGTTATCAGTCGACATGTTGAAATTGCAAAAGAAAACTGAAGATTCGA
AATTCGCAGTGTTCTTGGATCACAAGACACTTATAAACGAAGCATATGAC
GAATTTAAGCTCAAGTCCGAACTGTTCCAGTTCCATGCCAAAAAGACGGA
CAAAGGCATTGAGGAAGACAAGACCAGGAAGCGCAAAAGGAAAGCCGGCG
TAGAAGATGCGTCGTCCTTGGAGGATTTACACTTAGTGAATGAATATCTA
GAGCTTCTGAGCAAGCCCGTTGAACCGGAGGACAGTTCACCGATGAAGAG
GCACTGGGAGGATGGCTACAACGTGCCCCAGTTGCATGGAGCCAACGAAA
GTGGACGGATGCAGCGGTTTCTGAGAGTTGATGGATCCCGTGGCGTGTAC
TTGATTCCCAATCAATCCCGATTCTTCAACCACAATGTGGACAATCTGCC
TGCACTACTGCACCAACTTCTGCCCGCCTACGATCTCATCGTGCTGGATC
CTCCGTGGCGGAATAAGTACATCCGCAGGCTGAAGCGGGCCAAGCCGGAG
CTGGGATACTCGATGCTGAGCAATGAGCAATTGTCGCACATACCGCTCTC
GAAGCTTACGCACCCACGGTCACTGGTGGCCATCTGGTGCACCAATTCGA
CGCTGCATCAGTTGGCCCTGGAGCAGCAGCTGCTGCCCAGTTGGAATCTC
CGGTTGCTCCACAAGCTCCGATGGTACAAACTTAGCACAGACCATGAACT
AATTGCTCCCCCGCAGTCGGATCTCACCCAGAAGCAGCCTTACGAGATGC
TCTACGTGGCCTGTCGCTCCGATGCTTCTGAAAACTATGGAAAAGATATC
CAACAGACCGAGCTGATCTTCAGCGTGCCCAGCATTGTGCATTCCCACAA
GCCACCACTGCTGTCTTGGCTGAGGGAGCACCTCCTGTTGGATAAGGACC
AGCTGGAACCAAACTGCCTGGAGCTGTTTGCCCGATATCTGCATCCCCAC
TTCACTTCAATTGGCTTAGAAGTGCTCAAACTGATGGACGAAAGGCTATA
TGAAGTCCGTAAAGTAGAACATTGCAACCAGGAGGAGGTAAATTAGAAGC
TTTCTAGACCAT

BS15017.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:31:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG14906-RC 1080 CG14906-PC 1..1080 17..1096 5400 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:31:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG14906-RC 1177 CG14906-RC 33..1112 17..1096 5400 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:31:08
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16650046..16651125 1096..17 5400 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:31:09 has no hits.

BS15017.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:57 Download gff for BS15017.complete
Subject Subject Range Query Range Percent Splice Strand
CG14907-RB 1156..2230 22..1096 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:01:01 Download gff for BS15017.complete
Subject Subject Range Query Range Percent Splice Strand
CG14906-RC 38..1112 22..1096 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:23:44 Download gff for BS15017.complete
Subject Subject Range Query Range Percent Splice Strand
CG14907-RB 1156..2230 22..1096 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:30:47 Download gff for BS15017.complete
Subject Subject Range Query Range Percent Splice Strand
CG14906-RC 38..1112 22..1096 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:30:47 Download gff for BS15017.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16650046..16651120 22..1096 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:01:01 Download gff for BS15017.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12475768..12476842 22..1096 100   Minus

BS15017.3prime Sequence

806 bp (652 high quality bases) assembled on 2006-10-23

> BS15017.3prime
ATGGTCTAGAAAGCTTCTAATTTACCTCCTCCTGGTTGCAATGTTCTACT
TTACGGACTTCATATAGCCTTTCGTCCATCAGTTTGAGCACTTCTAAGCC
AATTGAAGTGAAGTGGGGATGCAGATATCGGGCAAACAGCTCCAGGCAGT
TTGGTTCCAGCTGGTCCTTATCCAACAGGAGGTGCTCCCTCAGCCAAGAC
AGCAGTGGTGGCTTGTGGGAATGCACAATGCTGGGCACGCTGAAGATCAG
CTCGGTCTGTTGGATATCTTTTCCATAGTTTTCAGAAGCATCGGAGCGAC
AGGCCACGTAGAGCATCTCGTAAGGCTGCTTCTGGGTGAGATCCGACTGC
GGGGGAGCAATTAGTTCATGGTCTGTGCTAAGTTTGTACCATCGGAGCTT
GTGGAGCAACCGGAGATTCCAACTGGGCAGCAGCTGCTGCTCCAGGGCCA
ACTGATGCAGCGTCGAATTGGTGCACCAGATGGCCACCAGTGACCGTGGG
TGCGTAAGCTTCGAGAGCGGTATGTGCGACAATTGCTCATTGCTCAGCAT
CGAGTATCCCAGCTCCGGCTTGGCCCGCTTCAACCTGCGGATGTACTTAT
TCCGCCACGGAGGATCCAGCACGATGAGATCGTAGGCGGGCAGAAGTTGG
TGCAGTAGTGCAGGCAGATTGTCCACATTGTGGTTGAAGAATCGGGATTG
ATTGGGAATCAAGTACACGCCCCGGGATCCATCAACTCTCAAAAACCGCT
GCATCCGTCCCCTTTCCTTGGCTCCATTGCAATTGGGGCACGTTTGTACC
TTCCTC

BS15017.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:12:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG14906-PA 1080 CG14906-RA 320..1080 777..17 3680 99.3 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:52:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG14906-RC 1177 CG14906-RC 336..1112 794..17 3775 99.1 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:52:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16650046..16650822 17..794 3750 99.1 Plus
Blast to na_te.dros performed on 2015-02-12 05:52:37 has no hits.

BS15017.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:14:41 Download gff for BS15017.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14906-PA 292..1080 17..806 98   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:47:23 Download gff for BS15017.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14906-PA 292..1080 17..806 98   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 06:29:42 Download gff for BS15017.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14906-RC 324..1114 12..806 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:03:41 Download gff for BS15017.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14906-RC 324..1114 12..806 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:03:41 Download gff for BS15017.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 16650044..16650834 12..806 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 06:29:42 Download gff for BS15017.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12475766..12476556 12..806 98   Plus

BS15017.5prime Sequence

782 bp (732 high quality bases) assembled on 2006-10-23

> BS15017.5prime
GAAGTTATCCGTCGACGTGTTGAAATTGCAAAAGAAAACTGAAGATTCGA
AATTCGCAGTGTTCTTGGATCACAAGACACTTATAAACGAAGCATATGAC
GAATTTAAGCTCAAGTCCGAACTGTTCCAGTTCCATGCCAAAAAGACGGA
CAAAGGCATTGAGGAAGACAAGACCAGGAAGCGCAAAAGGAAAGCCGGCG
TAGAAGATGCGTCGTCCTTGGAGGATTTACACTTAGTGAATGAATATCTA
GAGCTTCTGAGCAAGCCCGTTGAACCGGAGGACAGTTCACCGATGAAGAG
GCACTGGGAGGATGGCTACAACGTGCCCCAGTTGCATGGAGCCAACGAAA
GTGGACGGATGCAGCGGTTTCTGAGAGTTGATGGATCCCGTGGCGTGTAC
TTGATTCCCAATCAATCCCGATTCTTCAACCACAATGTGGACAATCTGCC
TGCACTACTGCACCAACTTCTGCCCGCCTACGATCTCATCGTGCTGGATC
CTCCGTGGCGGAATAAGTACATCCGCAGGCTGAAGCGGGCCAAGCCGGAG
CTGGGATACTCGATGCTGAGCAATGAGCAATTGTCGCACATACCGCTCTC
GAAGCTTACGCACCCACGGTCACTGGTGGCCATCTGGTGCACCAATTCGA
CGCTGCATCAGTTGGCCCTGGAGCAGCAGCTGCTGCCCAGTTGGAATCTC
CGGTTGCTCCACAAGCTCCGATGGTACAAACTTAGCACAGACCATGAACT
AATTGCTCCCCCGCAGTCGGATCTCACCCAGA

BS15017.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:12:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG14906-PA 1080 CG14906-RA 2..766 18..782 3825 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:37:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG14906-RC 1177 CG14906-RC 34..798 18..782 3825 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:37:16
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16650360..16651124 782..18 3825 100 Minus
Blast to na_te.dros performed on 2015-02-13 12:37:16 has no hits.

BS15017.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:14:42 Download gff for BS15017.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14906-PA 2..765 18..781 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:47:24 Download gff for BS15017.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14906-PA 2..765 18..781 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:03:05 Download gff for BS15017.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14906-RC 30..797 14..781 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:16:37 Download gff for BS15017.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14906-RC 30..797 14..781 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:16:37 Download gff for BS15017.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 16650361..16651128 14..781 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:03:05 Download gff for BS15017.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12476083..12476850 14..781 99   Minus

BS15017.pep Sequence

Translation from 16 to 1095

> BS15017.pep
MLKLQKKTEDSKFAVFLDHKTLINEAYDEFKLKSELFQFHAKKTDKGIEE
DKTRKRKRKAGVEDASSLEDLHLVNEYLELLSKPVEPEDSSPMKRHWEDG
YNVPQLHGANESGRMQRFLRVDGSRGVYLIPNQSRFFNHNVDNLPALLHQ
LLPAYDLIVLDPPWRNKYIRRLKRAKPELGYSMLSNEQLSHIPLSKLTHP
RSLVAIWCTNSTLHQLALEQQLLPSWNLRLLHKLRWYKLSTDHELIAPPQ
SDLTQKQPYEMLYVACRSDASENYGKDIQQTELIFSVPSIVHSHKPPLLS
WLREHLLLDKDQLEPNCLELFARYLHPHFTSIGLEVLKLMDERLYEVRKV
EHCNQEEVN*

BS15017.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:11:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG14906-PC 359 CG14906-PC 1..359 1..359 1899 100 Plus