Clone Sequence Records
BS15017.complete Sequence
1112 bp assembled on 2010-02-09
GenBank Submission: KX802915
> BS15017.complete
GAAGTTATCAGTCGACATGTTGAAATTGCAAAAGAAAACTGAAGATTCGA
AATTCGCAGTGTTCTTGGATCACAAGACACTTATAAACGAAGCATATGAC
GAATTTAAGCTCAAGTCCGAACTGTTCCAGTTCCATGCCAAAAAGACGGA
CAAAGGCATTGAGGAAGACAAGACCAGGAAGCGCAAAAGGAAAGCCGGCG
TAGAAGATGCGTCGTCCTTGGAGGATTTACACTTAGTGAATGAATATCTA
GAGCTTCTGAGCAAGCCCGTTGAACCGGAGGACAGTTCACCGATGAAGAG
GCACTGGGAGGATGGCTACAACGTGCCCCAGTTGCATGGAGCCAACGAAA
GTGGACGGATGCAGCGGTTTCTGAGAGTTGATGGATCCCGTGGCGTGTAC
TTGATTCCCAATCAATCCCGATTCTTCAACCACAATGTGGACAATCTGCC
TGCACTACTGCACCAACTTCTGCCCGCCTACGATCTCATCGTGCTGGATC
CTCCGTGGCGGAATAAGTACATCCGCAGGCTGAAGCGGGCCAAGCCGGAG
CTGGGATACTCGATGCTGAGCAATGAGCAATTGTCGCACATACCGCTCTC
GAAGCTTACGCACCCACGGTCACTGGTGGCCATCTGGTGCACCAATTCGA
CGCTGCATCAGTTGGCCCTGGAGCAGCAGCTGCTGCCCAGTTGGAATCTC
CGGTTGCTCCACAAGCTCCGATGGTACAAACTTAGCACAGACCATGAACT
AATTGCTCCCCCGCAGTCGGATCTCACCCAGAAGCAGCCTTACGAGATGC
TCTACGTGGCCTGTCGCTCCGATGCTTCTGAAAACTATGGAAAAGATATC
CAACAGACCGAGCTGATCTTCAGCGTGCCCAGCATTGTGCATTCCCACAA
GCCACCACTGCTGTCTTGGCTGAGGGAGCACCTCCTGTTGGATAAGGACC
AGCTGGAACCAAACTGCCTGGAGCTGTTTGCCCGATATCTGCATCCCCAC
TTCACTTCAATTGGCTTAGAAGTGCTCAAACTGATGGACGAAAGGCTATA
TGAAGTCCGTAAAGTAGAACATTGCAACCAGGAGGAGGTAAATTAGAAGC
TTTCTAGACCAT
BS15017.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:31:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14906-RC | 1080 | CG14906-PC | 1..1080 | 17..1096 | 5400 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:31:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14906-RC | 1177 | CG14906-RC | 33..1112 | 17..1096 | 5400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:31:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 16650046..16651125 | 1096..17 | 5400 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:31:09 has no hits.
BS15017.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:57 Download gff for
BS15017.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14907-RB | 1156..2230 | 22..1096 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:01:01 Download gff for
BS15017.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14906-RC | 38..1112 | 22..1096 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:23:44 Download gff for
BS15017.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14907-RB | 1156..2230 | 22..1096 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:30:47 Download gff for
BS15017.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14906-RC | 38..1112 | 22..1096 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:30:47 Download gff for
BS15017.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 16650046..16651120 | 22..1096 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:01:01 Download gff for
BS15017.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 12475768..12476842 | 22..1096 | 100 | | Minus |
BS15017.3prime Sequence
806 bp (652 high quality bases) assembled on 2006-10-23
> BS15017.3prime
ATGGTCTAGAAAGCTTCTAATTTACCTCCTCCTGGTTGCAATGTTCTACT
TTACGGACTTCATATAGCCTTTCGTCCATCAGTTTGAGCACTTCTAAGCC
AATTGAAGTGAAGTGGGGATGCAGATATCGGGCAAACAGCTCCAGGCAGT
TTGGTTCCAGCTGGTCCTTATCCAACAGGAGGTGCTCCCTCAGCCAAGAC
AGCAGTGGTGGCTTGTGGGAATGCACAATGCTGGGCACGCTGAAGATCAG
CTCGGTCTGTTGGATATCTTTTCCATAGTTTTCAGAAGCATCGGAGCGAC
AGGCCACGTAGAGCATCTCGTAAGGCTGCTTCTGGGTGAGATCCGACTGC
GGGGGAGCAATTAGTTCATGGTCTGTGCTAAGTTTGTACCATCGGAGCTT
GTGGAGCAACCGGAGATTCCAACTGGGCAGCAGCTGCTGCTCCAGGGCCA
ACTGATGCAGCGTCGAATTGGTGCACCAGATGGCCACCAGTGACCGTGGG
TGCGTAAGCTTCGAGAGCGGTATGTGCGACAATTGCTCATTGCTCAGCAT
CGAGTATCCCAGCTCCGGCTTGGCCCGCTTCAACCTGCGGATGTACTTAT
TCCGCCACGGAGGATCCAGCACGATGAGATCGTAGGCGGGCAGAAGTTGG
TGCAGTAGTGCAGGCAGATTGTCCACATTGTGGTTGAAGAATCGGGATTG
ATTGGGAATCAAGTACACGCCCCGGGATCCATCAACTCTCAAAAACCGCT
GCATCCGTCCCCTTTCCTTGGCTCCATTGCAATTGGGGCACGTTTGTACC
TTCCTC
BS15017.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:12:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14906-PA | 1080 | CG14906-RA | 320..1080 | 777..17 | 3680 | 99.3 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:52:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14906-RC | 1177 | CG14906-RC | 336..1112 | 794..17 | 3775 | 99.1 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:52:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 16650046..16650822 | 17..794 | 3750 | 99.1 | Plus |
Blast to na_te.dros performed on 2015-02-12 05:52:37 has no hits.
BS15017.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:14:41 Download gff for
BS15017.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14906-PA | 292..1080 | 17..806 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:47:23 Download gff for
BS15017.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14906-PA | 292..1080 | 17..806 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 06:29:42 Download gff for
BS15017.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14906-RC | 324..1114 | 12..806 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:03:41 Download gff for
BS15017.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14906-RC | 324..1114 | 12..806 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:03:41 Download gff for
BS15017.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 16650044..16650834 | 12..806 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 06:29:42 Download gff for
BS15017.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 12475766..12476556 | 12..806 | 98 | | Plus |
BS15017.5prime Sequence
782 bp (732 high quality bases) assembled on 2006-10-23
> BS15017.5prime
GAAGTTATCCGTCGACGTGTTGAAATTGCAAAAGAAAACTGAAGATTCGA
AATTCGCAGTGTTCTTGGATCACAAGACACTTATAAACGAAGCATATGAC
GAATTTAAGCTCAAGTCCGAACTGTTCCAGTTCCATGCCAAAAAGACGGA
CAAAGGCATTGAGGAAGACAAGACCAGGAAGCGCAAAAGGAAAGCCGGCG
TAGAAGATGCGTCGTCCTTGGAGGATTTACACTTAGTGAATGAATATCTA
GAGCTTCTGAGCAAGCCCGTTGAACCGGAGGACAGTTCACCGATGAAGAG
GCACTGGGAGGATGGCTACAACGTGCCCCAGTTGCATGGAGCCAACGAAA
GTGGACGGATGCAGCGGTTTCTGAGAGTTGATGGATCCCGTGGCGTGTAC
TTGATTCCCAATCAATCCCGATTCTTCAACCACAATGTGGACAATCTGCC
TGCACTACTGCACCAACTTCTGCCCGCCTACGATCTCATCGTGCTGGATC
CTCCGTGGCGGAATAAGTACATCCGCAGGCTGAAGCGGGCCAAGCCGGAG
CTGGGATACTCGATGCTGAGCAATGAGCAATTGTCGCACATACCGCTCTC
GAAGCTTACGCACCCACGGTCACTGGTGGCCATCTGGTGCACCAATTCGA
CGCTGCATCAGTTGGCCCTGGAGCAGCAGCTGCTGCCCAGTTGGAATCTC
CGGTTGCTCCACAAGCTCCGATGGTACAAACTTAGCACAGACCATGAACT
AATTGCTCCCCCGCAGTCGGATCTCACCCAGA
BS15017.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:12:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14906-PA | 1080 | CG14906-RA | 2..766 | 18..782 | 3825 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:37:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14906-RC | 1177 | CG14906-RC | 34..798 | 18..782 | 3825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:37:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 16650360..16651124 | 782..18 | 3825 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 12:37:16 has no hits.
BS15017.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:14:42 Download gff for
BS15017.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14906-PA | 2..765 | 18..781 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:47:24 Download gff for
BS15017.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14906-PA | 2..765 | 18..781 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:03:05 Download gff for
BS15017.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14906-RC | 30..797 | 14..781 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:16:37 Download gff for
BS15017.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14906-RC | 30..797 | 14..781 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:16:37 Download gff for
BS15017.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 16650361..16651128 | 14..781 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:03:05 Download gff for
BS15017.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 12476083..12476850 | 14..781 | 99 | | Minus |
BS15017.pep Sequence
Translation from 16 to 1095
> BS15017.pep
MLKLQKKTEDSKFAVFLDHKTLINEAYDEFKLKSELFQFHAKKTDKGIEE
DKTRKRKRKAGVEDASSLEDLHLVNEYLELLSKPVEPEDSSPMKRHWEDG
YNVPQLHGANESGRMQRFLRVDGSRGVYLIPNQSRFFNHNVDNLPALLHQ
LLPAYDLIVLDPPWRNKYIRRLKRAKPELGYSMLSNEQLSHIPLSKLTHP
RSLVAIWCTNSTLHQLALEQQLLPSWNLRLLHKLRWYKLSTDHELIAPPQ
SDLTQKQPYEMLYVACRSDASENYGKDIQQTELIFSVPSIVHSHKPPLLS
WLREHLLLDKDQLEPNCLELFARYLHPHFTSIGLEVLKLMDERLYEVRKV
EHCNQEEVN*
BS15017.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:11:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14906-PC | 359 | CG14906-PC | 1..359 | 1..359 | 1899 | 100 | Plus |