Clone Sequence Records
BS15031.complete Sequence
1403 bp assembled on 2009-12-07
GenBank Submission: KX802370
> BS15031.complete
GAAGTTATCAGTCGACATGAGAAGATCGAAAATTGCCCGCTTTCACACAA
TGGCCGCGTTGGGCCTACTGCTGCTGGTGGGCGTGCATGGAGCCACGATA
ATCAGCATCAAGTACCCGGATAAGCCCGCCGTGGAGCCGCAGCCGGCCAA
GAGGGATCTCAGCCTGAGCTACGCAGCCACCAACATCGACTCCAAGGAGG
GTACCCGCGTGAAGACCATCACGGTGATCAAGAATGTGGGAGGCATTTCG
GCGCCCGAAGAAGCTGCGGCCTTGGGATCCTCCATCGCCAGCAGCCACAA
CCACAAGCAGCAGCCGAAACTGATCATTGATCCCAGTCTGCACAAGAGCG
AGGAGTGGGCAAGTGCTTTCCGAGACAACTTTGACTCCTACGGAGCACTG
CCCGATGTGCCCGACATAGATGACCTATTCGAGTTTGTCAATCGCAAGAA
GCCCGAGGGTGAAAAGAAACCGGAGGAGGTGCCCAGCCAGAAGGAGGAAA
GGGTGCCGAAGGAGTTGCAAAAGCCGGCGGAGGAGACCACCACCAAGAAA
GCCGGAGCCAGTGAGCAAAGCGAGGGCGGGATCGTACCCAGTGGCAACAT
CGATAGCGACGAGGCTGTGGTCGAGAAGATAAAGGGTGATGCCGAACTGT
TGCCGCACATTAAGCAGGCCAACATCCTGCGCCTCCAGGCGGCCCACGCC
CAAGCCCGCTCGGGAGTACGAACCAAGGAGTCGCTGATCGCCGTCAACTA
CTCCACGCCCATGCATCAGGTGAGCCAGTACTTCGACAACTATGTCCAAG
CGGTGCCAAATGGCTACGACTACCCAAAGCCCTGTGGCATGCAGCCTGGC
AACAGTATCCAAGTGACCACGCCTTCAGGCCGCACCTACGACATTCCGCA
GAGCAACAGCAGTGGCACTGGTGGTGGCAACCACCCGTACTTGGCTCCAG
CGCTCACAAAGAAGACGCAGATTCCGCCGATCACGGTGCAGCCTCCGGTG
CAACAGCAGCAGCCTCAGCCTCCCAATTACTCCTCCGTGAACTCGATTGT
GCCGCCTATAGTGCAACCGCAGCCTCAGGGCAATGCAAATCTTCCACAGC
AGCCGCAACAGCCTCCGGTGGTGAATCCTCCAAACGGAGGTATCCTGCCG
CCTCTGGGAACGGGCGGTATCTCCACCAGCCAGCGTCCCTATGTGGCGCC
CAGGCTGCGAAACAACGGCCTAGGCATCAGCAGGGCGCCCAGCACTCCGG
GCCCGATTCAGATTCCCGGGCAACCTGGCCTCGTGGGTAACAACAATCCA
CAGCAGACCCCGAACTTCCGCACGAGCATTTTTGGCGGTGGCTCAAATCG
TCCCAACACGCTGCGATCGCGTGGTCTAAAGTATTGAAAGCTTTCTAGAC
CAT
BS15031.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:06:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12003-RA | 1371 | CG12003-PA | 1..1371 | 17..1387 | 6855 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:06:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12003-RA | 1807 | CG12003-RA | 162..1538 | 17..1393 | 6870 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:06:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1566172..1567533 | 32..1393 | 6795 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:06:05 has no hits.
BS15031.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:45:36 Download gff for
BS15031.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12003-RA | 162..1531 | 17..1386 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:05:55 Download gff for
BS15031.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12003-RA | 162..1531 | 17..1386 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:10:37 Download gff for
BS15031.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12003-RA | 162..1531 | 17..1386 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:04:01 Download gff for
BS15031.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12003-RA | 162..1531 | 17..1386 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:04:01 Download gff for
BS15031.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1566172..1567526 | 32..1386 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:05:55 Download gff for
BS15031.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1566172..1567526 | 32..1386 | 100 | | Plus |
BS15031.3prime Sequence
865 bp (751 high quality bases) assembled on 2006-10-23
> BS15031.3prime
ATGGTCTAGAAAGCTTTCAATACTTTAGACCACGCGATCGCAGCGTGTTG
GGACGATTTGAGCCACCGCCAAAAATGCTCGTGCGGAAGTTCGGGGTCTG
CTGTGGATTGTTGTTACCCACGAGGCCAGGTTGCCCGGGAATCTGAATCG
GGCCCGGAGTGCTGGGCGCCCTGCTGATGCCTAGGCCGTTGTTTCGCAGC
CTGGGCGCCACATAGGGACGCTGGCTGGTGGAGATACCGCCCGTTCCCAG
AGGCGGCAGGATACCTCCGTTTGGAGGATTCACCACCGGAGGCTGTTGCG
GCTGCTGTGGAAGATTTGCATTGCCCTGAGGCTGCGGTTGCACTATAGGC
GGCACAATCGAGTTCACGGAGGAGTAATTGGGAGGCTGAGGCTGCTGCTG
TTGCACCGGAGGCTGCACCGTGATCGGCGGAATCTGCGTCTTCTTTGTGA
GCGCTGGAGCCAAGTACGGGTGGTTGCCACCACCAGTGCCACTGCTGTTG
CTCTGCGGAATGTCGTAGGTGCGGCCTGAAGGCGTGGTCACTTGGATACT
GTTGCCAGGCTGCATGCCACAGGGCTTTGGGTAGTCGTAGCCATTTGGCA
CCGCTTGGACATAGTTGTCGAAGTACTGGCTCACCTGATGCATGGGCGTG
GAGTAGTTGACGGCGATCAGCGACTCCTTGGTTCGTACTCCCGAGCGGGC
TTGGGCGTGGGCCGCCTGGAGGCGCAGGATGTTGGCCTGCTTAATGTGCG
GCAACAGTTCGGCATCACCCTTTATCTTCTCGACCACAGCCTCGTCGCTA
TCGATGTTGCCACTGGGTACGATCCCGCCCTCGCTTTGCTCACTGGCTCC
GGCTTTCTTGGTGGT
BS15031.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:12:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12003-PA | 1371 | CG12003-RA | 523..1371 | 865..17 | 4245 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:37:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12003-RA | 1807 | CG12003-RA | 684..1538 | 865..11 | 4260 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:37:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1566679..1567533 | 865..11 | 4260 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-11 04:37:09 has no hits.
BS15031.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:15:04 Download gff for
BS15031.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12003-PA | 523..1371 | 17..865 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:47:52 Download gff for
BS15031.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12003-PA | 523..1371 | 17..865 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:37:48 Download gff for
BS15031.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12003-RA | 684..1538 | 11..865 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 06:44:07 Download gff for
BS15031.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12003-RA | 684..1538 | 11..865 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 06:44:07 Download gff for
BS15031.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1566679..1567533 | 11..865 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:37:48 Download gff for
BS15031.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1566679..1567533 | 11..865 | 99 | | Minus |
BS15031.5prime Sequence
768 bp (767 high quality bases) assembled on 2006-10-23
> BS15031.5prime
GAAGTTATCCTTCGACATGAGAAGATCGAAAATTGCCCGCTTTCACACAA
TGGCCGCGTTGGGCCTACTGCTGCTGGTGGGCGTGCATGGAGCCACGATA
ATCAGCATCAAGTACCCGGATAAGCCCGCCGTGGAGCCGCAGCCGGCCAA
GAGGGATCTCAGCCTGAGCTACGCAGCCACCAACATCGACTCCAAGGAGG
GTACCCGCGTGAAGACCATCACGGTGATCAAGAATGTGGGAGGCATTTCG
GCGCCCGAAGAAGCTGCGGCCTTGGGATCCTCCATCGCCAGCAGCCACAA
CCACAAGCAGCAGCCGAAACTGATCATTGATCCCAGTCTGCACAAGAGCG
AGGAGTGGGCAAGTGCTTTCCGAGACAACTTTGACTCCTACGGAGCACTG
CCCGATGTGCCCGACATAGATGACCTATTCGAGTTTGTCAATCGCAAGAA
GCCCGAGGGTGAAAAGAAACCGGAGGAGGTGCCCAGCCAGAAGGAGGAAA
GGGTGCCGAAGGAGTTGCAAAAGCCGGCGGAGGAGACCACCACCAAGAAA
GCCGGAGCCAGTGAGCAAAGCGAGGGCGGGATCGTACCCAGTGGCAACAT
CGATAGCGACGAGGCTGTGGTCGAGAAGATAAAGGGTGATGCCGAACTGT
TGCCGCACATTAAGCAGGCCAACATCCTGCGCCTCCAGGCGGCCCACGCC
CAAGCCCGCTCGGGAGTACGAACCAAGGAGTCGCTGATCGCCGTCAACTA
CTCCACGCCCATGCATCA
BS15031.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:12:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12003-PA | 1371 | CG12003-RA | 1..752 | 17..768 | 3760 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:58:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12003-RA | 1807 | CG12003-RA | 162..913 | 17..768 | 3760 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:58:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1566172..1566908 | 32..768 | 3685 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 22:58:43 has no hits.
BS15031.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:15:05 Download gff for
BS15031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12003-PA | 1..751 | 17..767 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:47:53 Download gff for
BS15031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12003-PA | 1..751 | 17..767 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:34:54 Download gff for
BS15031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12003-RA | 160..912 | 13..767 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:28:34 Download gff for
BS15031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12003-RA | 160..912 | 13..767 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:28:34 Download gff for
BS15031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1566172..1566907 | 32..767 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:34:54 Download gff for
BS15031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1566172..1566907 | 32..767 | 100 | | Plus |
BS15031.pep Sequence
Translation from 16 to 1386
> BS15031.pep
MRRSKIARFHTMAALGLLLLVGVHGATIISIKYPDKPAVEPQPAKRDLSL
SYAATNIDSKEGTRVKTITVIKNVGGISAPEEAAALGSSIASSHNHKQQP
KLIIDPSLHKSEEWASAFRDNFDSYGALPDVPDIDDLFEFVNRKKPEGEK
KPEEVPSQKEERVPKELQKPAEETTTKKAGASEQSEGGIVPSGNIDSDEA
VVEKIKGDAELLPHIKQANILRLQAAHAQARSGVRTKESLIAVNYSTPMH
QVSQYFDNYVQAVPNGYDYPKPCGMQPGNSIQVTTPSGRTYDIPQSNSSG
TGGGNHPYLAPALTKKTQIPPITVQPPVQQQQPQPPNYSSVNSIVPPIVQ
PQPQGNANLPQQPQQPPVVNPPNGGILPPLGTGGISTSQRPYVAPRLRNN
GLGISRAPSTPGPIQIPGQPGLVGNNNPQQTPNFRTSIFGGGSNRPNTLR
SRGLKY*
BS15031.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:35:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12003-PA | 456 | CG12003-PA | 1..456 | 1..456 | 2384 | 100 | Plus |
