Clone BS15032 Report

Search the DGRC for BS15032

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:150
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptCG8661-RA
Protein status:BS15032.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15032.5prime Sequence

627 bp (627 high quality bases) assembled on 2006-10-23

> BS15032.5prime
GAAGTTATCCTTCGACGTGAAGTATACCATTCTTATTTTGGCTTTGGGCC
TGTTTTGCGTAAATGCATTGGTGGCTCCTGTTCCCAGCGCCCTGGACTCT
TCGTCAGAACTGGACGATGTGACCGATGGTAGCTTGGAGGTGGAGGACTT
TGGCGTGCTGAGTACGACCTACAAATCCCTAAAGATCGCTCTGCGAAGCA
TCAAGGGACTCAATTGCATAATCAAGTGGGTGGCGGGCATCAAGGACAGT
GCGACCCAATTTAACACGGACGTGGTCGTGTGCGGCGTCACCGCCAGCAA
GGATGTGACCAAATTGATCAACGCCAACAATAAGATCCTCAGCACTTGCA
ACGACCTCATCAATCTGAGGTCCAACACTTGCCCCCAAACGGACGACGAG
GAGACGAAGGTCTCTGGCAGCTGCTTTGTTAAGACTCTGCGCAAGGTGTG
GTCCCTAAAGAAGCAAGTGGACAATGCCATCAAGCTGGCCAAGAAGATCC
CGCAAACCGGTCCCAATGCCGTCGCCTGTGTCTCCGATGCCGTCAACACC
CTGACCACCTACTACACCGCCTTTCCCCAGAACATCATCAGCTGCTCCAA
GCTGACTTCTTAGAAGCTTTCTAGACC

BS15032.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:12:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG8661-PA 597 CG8661-RA 2..597 18..613 2980 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:06:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG8661-RA 677 CG8661-RA 29..624 18..613 2980 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:06:40
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17283815..17284369 613..59 2775 100 Minus
X 23542271 X 17284428..17284472 62..18 225 100 Minus
Blast to na_te.dros performed on 2015-02-13 07:06:43 has no hits.

BS15032.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:15:08 Download gff for BS15032.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8661-PA 2..597 18..613 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:47:56 Download gff for BS15032.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8661-PA 2..597 18..613 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 20:50:23 Download gff for BS15032.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8661-RA 29..632 18..624 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:24:46 Download gff for BS15032.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8661-RA 29..632 18..624 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:24:46 Download gff for BS15032.5prime
Subject Subject Range Query Range Percent Splice Strand
X 17283807..17284369 59..624 99 <- Minus
X 17284432..17284472 18..58 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 20:50:23 Download gff for BS15032.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 17177840..17178402 59..624 99 <- Minus
arm_X 17178465..17178505 18..58 100   Minus

BS15032.3prime Sequence

627 bp (627 high quality bases) assembled on 2006-10-23

> BS15032.3prime
ATGGTCTAGAAAGCTTCTAAGAAGTCAGCTTGGAGCAGCTGATGATGTTC
TGGGGAAAGGCGGTGTAGTAGGTGGTCAGGGTGTTGACGGCATCGGAGAC
ACAGGCGACGGCATTGGGACCGGTTTGCGGGATCTTCTTGGCCAGCTTGA
TGGCATTGTCCACTTGCTTCTTTAGGGACCACACCTTGCGCAGAGTCTTA
ACAAAGCAGCTGCCAGAGACCTTCGTCTCCTCGTCGTCCGTTTGGGGGCA
AGTGTTGGACCTCAGATTGATGAGGTCGTTGCAAGTGCTGAGGATCTTAT
TGTTGGCGTTGATCAATTTGGTCACATCCTTGCTGGCGGTGACGCCGCAC
ACGACCACGTCCGTGTTAAATTGGGTCGCACTGTCCTTGATGCCCGCCAC
CCACTTGATTATGCAATTGAGTCCCTTGATGCTTCGCAGAGCGATCTTTA
GGGATTTGTAGGTCGTACTCAGCACGCCAAAGTCCTCCACCTCCAAGCTA
CCATCGGTCACATCGTCCAGTTCTGACGAAGAGTCCAGGGCGCTGGGAAC
AGGAGCCACCAATGCATTTACGCAAAACAGGCCCAAAGCCAAAATAAGAA
TGGTATACTTCATGTCGACTGATAACT

BS15032.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:12:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG8661-PA 597 CG8661-RA 1..597 613..17 2985 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:22:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG8661-RA 677 CG8661-RA 27..624 614..17 2990 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:22:13
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17283815..17284369 17..571 2775 100 Plus
X 23542271 X 17284428..17284474 568..614 235 100 Plus
Blast to na_te.dros performed on 2015-02-12 10:22:14 has no hits.

BS15032.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:15:06 Download gff for BS15032.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8661-PA 1..597 17..613 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:47:55 Download gff for BS15032.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8661-PA 1..597 17..613 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:56:25 Download gff for BS15032.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8661-RA 27..632 6..614 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:55:34 Download gff for BS15032.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8661-RA 27..632 6..614 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:55:34 Download gff for BS15032.3prime
Subject Subject Range Query Range Percent Splice Strand
X 17283807..17284369 6..571 99 <- Plus
X 17284432..17284474 572..614 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:56:25 Download gff for BS15032.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 17177840..17178402 6..571 99 <- Plus
arm_X 17178465..17178507 572..614 100   Plus

BS15032.complete Sequence

629 bp assembled on 2006-11-01

GenBank Submission: FJ637858

> BS15032.complete
GAAGTTATCAGTCGACATGAAGTATACCATTCTTATTTTGGCTTTGGGCC
TGTTTTGCGTAAATGCATTGGTGGCTCCTGTTCCCAGCGCCCTGGACTCT
TCGTCAGAACTGGACGATGTGACCGATGGTAGCTTGGAGGTGGAGGACTT
TGGCGTGCTGAGTACGACCTACAAATCCCTAAAGATCGCTCTGCGAAGCA
TCAAGGGACTCAATTGCATAATCAAGTGGGTGGCGGGCATCAAGGACAGT
GCGACCCAATTTAACACGGACGTGGTCGTGTGCGGCGTCACCGCCAGCAA
GGATGTGACCAAATTGATCAACGCCAACAATAAGATCCTCAGCACTTGCA
ACGACCTCATCAATCTGAGGTCCAACACTTGCCCCCAAACGGACGACGAG
GAGACGAAGGTCTCTGGCAGCTGCTTTGTTAAGACTCTGCGCAAGGTGTG
GTCCCTAAAGAAGCAAGTGGACAATGCCATCAAGCTGGCCAAGAAGATCC
CGCAAACCGGTCCCAATGCCGTCGCCTGTGTCTCCGATGCCGTCAACACC
CTGACCACCTACTACACCGCCTTTCCCCAGAACATCATCAGCTGCTCCAA
GCTGACTTCTTAGAAGCTTTCTAGACCAT

BS15032.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:07:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG8661-RA 597 CG8661-PA 1..597 17..613 2985 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:08:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG8661-RA 677 CG8661-RA 27..624 16..613 2990 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:07:58
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17283815..17284369 613..59 2775 100 Minus
X 23542271 X 17284428..17284474 62..16 235 100 Minus
Blast to na_te.dros performed on 2014-11-26 22:07:58 has no hits.

BS15032.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:21:31 Download gff for BS15032.complete
Subject Subject Range Query Range Percent Splice Strand
CG8661-RA 1..597 17..613 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:53:23 Download gff for BS15032.complete
Subject Subject Range Query Range Percent Splice Strand
CG8661-RA 10..615 16..624 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:47:51 Download gff for BS15032.complete
Subject Subject Range Query Range Percent Splice Strand
CG8661-RA 28..624 17..613 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:21:32 Download gff for BS15032.complete
Subject Subject Range Query Range Percent Splice Strand
CG8661-RA 10..615 16..624 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:52:10 Download gff for BS15032.complete
Subject Subject Range Query Range Percent Splice Strand
CG8661-RA 28..624 17..613 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:52:10 Download gff for BS15032.complete
Subject Subject Range Query Range Percent Splice Strand
X 17283815..17284369 59..613 100 <- Minus
X 17284432..17284473 17..58 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:47:51 Download gff for BS15032.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 17177848..17178402 59..613 100 <- Minus
arm_X 17178465..17178506 17..58 100   Minus

BS15032.pep Sequence

Translation from 16 to 612

> BS15032.pep
MKYTILILALGLFCVNALVAPVPSALDSSSELDDVTDGSLEVEDFGVLST
TYKSLKIALRSIKGLNCIIKWVAGIKDSATQFNTDVVVCGVTASKDVTKL
INANNKILSTCNDLINLRSNTCPQTDDEETKVSGSCFVKTLRKVWSLKKQ
VDNAIKLAKKIPQTGPNAVACVSDAVNTLTTYYTAFPQNIISCSKLTS*

BS15032.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:35:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG8661-PA 198 CG8661-PA 1..198 1..198 1005 100 Plus
CG5107-PA 213 CG5107-PA 49..209 31..193 231 32.1 Plus
CG8664-PB 214 CG8664-PB 45..209 29..193 172 27.4 Plus
CG8664-PA 214 CG8664-PA 45..209 29..193 172 27.4 Plus