Clone Sequence Records
BS15032.5prime Sequence
627 bp (627 high quality bases) assembled on 2006-10-23
> BS15032.5prime
GAAGTTATCCTTCGACGTGAAGTATACCATTCTTATTTTGGCTTTGGGCC
TGTTTTGCGTAAATGCATTGGTGGCTCCTGTTCCCAGCGCCCTGGACTCT
TCGTCAGAACTGGACGATGTGACCGATGGTAGCTTGGAGGTGGAGGACTT
TGGCGTGCTGAGTACGACCTACAAATCCCTAAAGATCGCTCTGCGAAGCA
TCAAGGGACTCAATTGCATAATCAAGTGGGTGGCGGGCATCAAGGACAGT
GCGACCCAATTTAACACGGACGTGGTCGTGTGCGGCGTCACCGCCAGCAA
GGATGTGACCAAATTGATCAACGCCAACAATAAGATCCTCAGCACTTGCA
ACGACCTCATCAATCTGAGGTCCAACACTTGCCCCCAAACGGACGACGAG
GAGACGAAGGTCTCTGGCAGCTGCTTTGTTAAGACTCTGCGCAAGGTGTG
GTCCCTAAAGAAGCAAGTGGACAATGCCATCAAGCTGGCCAAGAAGATCC
CGCAAACCGGTCCCAATGCCGTCGCCTGTGTCTCCGATGCCGTCAACACC
CTGACCACCTACTACACCGCCTTTCCCCAGAACATCATCAGCTGCTCCAA
GCTGACTTCTTAGAAGCTTTCTAGACC
BS15032.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:12:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8661-PA | 597 | CG8661-RA | 2..597 | 18..613 | 2980 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:06:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8661-RA | 677 | CG8661-RA | 29..624 | 18..613 | 2980 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:06:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17283815..17284369 | 613..59 | 2775 | 100 | Minus |
X | 23542271 | X | 17284428..17284472 | 62..18 | 225 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 07:06:43 has no hits.
BS15032.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:15:08 Download gff for
BS15032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8661-PA | 2..597 | 18..613 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:47:56 Download gff for
BS15032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8661-PA | 2..597 | 18..613 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 20:50:23 Download gff for
BS15032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8661-RA | 29..632 | 18..624 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:24:46 Download gff for
BS15032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8661-RA | 29..632 | 18..624 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:24:46 Download gff for
BS15032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17283807..17284369 | 59..624 | 99 | <- | Minus |
X | 17284432..17284472 | 18..58 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 20:50:23 Download gff for
BS15032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17177840..17178402 | 59..624 | 99 | <- | Minus |
arm_X | 17178465..17178505 | 18..58 | 100 | | Minus |
BS15032.3prime Sequence
627 bp (627 high quality bases) assembled on 2006-10-23
> BS15032.3prime
ATGGTCTAGAAAGCTTCTAAGAAGTCAGCTTGGAGCAGCTGATGATGTTC
TGGGGAAAGGCGGTGTAGTAGGTGGTCAGGGTGTTGACGGCATCGGAGAC
ACAGGCGACGGCATTGGGACCGGTTTGCGGGATCTTCTTGGCCAGCTTGA
TGGCATTGTCCACTTGCTTCTTTAGGGACCACACCTTGCGCAGAGTCTTA
ACAAAGCAGCTGCCAGAGACCTTCGTCTCCTCGTCGTCCGTTTGGGGGCA
AGTGTTGGACCTCAGATTGATGAGGTCGTTGCAAGTGCTGAGGATCTTAT
TGTTGGCGTTGATCAATTTGGTCACATCCTTGCTGGCGGTGACGCCGCAC
ACGACCACGTCCGTGTTAAATTGGGTCGCACTGTCCTTGATGCCCGCCAC
CCACTTGATTATGCAATTGAGTCCCTTGATGCTTCGCAGAGCGATCTTTA
GGGATTTGTAGGTCGTACTCAGCACGCCAAAGTCCTCCACCTCCAAGCTA
CCATCGGTCACATCGTCCAGTTCTGACGAAGAGTCCAGGGCGCTGGGAAC
AGGAGCCACCAATGCATTTACGCAAAACAGGCCCAAAGCCAAAATAAGAA
TGGTATACTTCATGTCGACTGATAACT
BS15032.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:12:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8661-PA | 597 | CG8661-RA | 1..597 | 613..17 | 2985 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:22:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8661-RA | 677 | CG8661-RA | 27..624 | 614..17 | 2990 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:22:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17283815..17284369 | 17..571 | 2775 | 100 | Plus |
X | 23542271 | X | 17284428..17284474 | 568..614 | 235 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 10:22:14 has no hits.
BS15032.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:15:06 Download gff for
BS15032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8661-PA | 1..597 | 17..613 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:47:55 Download gff for
BS15032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8661-PA | 1..597 | 17..613 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:56:25 Download gff for
BS15032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8661-RA | 27..632 | 6..614 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:55:34 Download gff for
BS15032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8661-RA | 27..632 | 6..614 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:55:34 Download gff for
BS15032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17283807..17284369 | 6..571 | 99 | <- | Plus |
X | 17284432..17284474 | 572..614 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:56:25 Download gff for
BS15032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17177840..17178402 | 6..571 | 99 | <- | Plus |
arm_X | 17178465..17178507 | 572..614 | 100 | | Plus |
BS15032.complete Sequence
629 bp assembled on 2006-11-01
GenBank Submission: FJ637858
> BS15032.complete
GAAGTTATCAGTCGACATGAAGTATACCATTCTTATTTTGGCTTTGGGCC
TGTTTTGCGTAAATGCATTGGTGGCTCCTGTTCCCAGCGCCCTGGACTCT
TCGTCAGAACTGGACGATGTGACCGATGGTAGCTTGGAGGTGGAGGACTT
TGGCGTGCTGAGTACGACCTACAAATCCCTAAAGATCGCTCTGCGAAGCA
TCAAGGGACTCAATTGCATAATCAAGTGGGTGGCGGGCATCAAGGACAGT
GCGACCCAATTTAACACGGACGTGGTCGTGTGCGGCGTCACCGCCAGCAA
GGATGTGACCAAATTGATCAACGCCAACAATAAGATCCTCAGCACTTGCA
ACGACCTCATCAATCTGAGGTCCAACACTTGCCCCCAAACGGACGACGAG
GAGACGAAGGTCTCTGGCAGCTGCTTTGTTAAGACTCTGCGCAAGGTGTG
GTCCCTAAAGAAGCAAGTGGACAATGCCATCAAGCTGGCCAAGAAGATCC
CGCAAACCGGTCCCAATGCCGTCGCCTGTGTCTCCGATGCCGTCAACACC
CTGACCACCTACTACACCGCCTTTCCCCAGAACATCATCAGCTGCTCCAA
GCTGACTTCTTAGAAGCTTTCTAGACCAT
BS15032.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:07:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8661-RA | 597 | CG8661-PA | 1..597 | 17..613 | 2985 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:08:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8661-RA | 677 | CG8661-RA | 27..624 | 16..613 | 2990 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:07:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17283815..17284369 | 613..59 | 2775 | 100 | Minus |
X | 23542271 | X | 17284428..17284474 | 62..16 | 235 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:07:58 has no hits.
BS15032.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:21:31 Download gff for
BS15032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8661-RA | 1..597 | 17..613 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:53:23 Download gff for
BS15032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8661-RA | 10..615 | 16..624 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:47:51 Download gff for
BS15032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8661-RA | 28..624 | 17..613 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:21:32 Download gff for
BS15032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8661-RA | 10..615 | 16..624 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:52:10 Download gff for
BS15032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8661-RA | 28..624 | 17..613 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:52:10 Download gff for
BS15032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17283815..17284369 | 59..613 | 100 | <- | Minus |
X | 17284432..17284473 | 17..58 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:47:51 Download gff for
BS15032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17177848..17178402 | 59..613 | 100 | <- | Minus |
arm_X | 17178465..17178506 | 17..58 | 100 | | Minus |
BS15032.pep Sequence
Translation from 16 to 612
> BS15032.pep
MKYTILILALGLFCVNALVAPVPSALDSSSELDDVTDGSLEVEDFGVLST
TYKSLKIALRSIKGLNCIIKWVAGIKDSATQFNTDVVVCGVTASKDVTKL
INANNKILSTCNDLINLRSNTCPQTDDEETKVSGSCFVKTLRKVWSLKKQ
VDNAIKLAKKIPQTGPNAVACVSDAVNTLTTYYTAFPQNIISCSKLTS*
BS15032.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:35:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8661-PA | 198 | CG8661-PA | 1..198 | 1..198 | 1005 | 100 | Plus |
CG5107-PA | 213 | CG5107-PA | 49..209 | 31..193 | 231 | 32.1 | Plus |
CG8664-PB | 214 | CG8664-PB | 45..209 | 29..193 | 172 | 27.4 | Plus |
CG8664-PA | 214 | CG8664-PA | 45..209 | 29..193 | 172 | 27.4 | Plus |