Clone BS15034 Report

Search the DGRC for BS15034

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:150
Well:34
Vector:pDNR-Dual
Associated Gene/TranscriptFbp1-RA
Protein status:BS15034.pep: full length peptide match
Sequenced Size:3122

Clone Sequence Records

BS15034.3prime Sequence

891 bp (815 high quality bases) assembled on 2006-10-23

> BS15034.3prime
ATGGTCTATAAAGCTTTTATTTCTCCTGAATGATGACCACATCCTGAAGC
AGGACATTGGTCAACTGCAGGAGCTCCTGCTCGTTATGGATGGGCCGGTC
CAGAGGATAACCCAATGGGCGGGCATCACGAAGAGAGGCGGAGCCAATGC
CAATGGTGATAGCGGGAACGACGTCCTGAACCTGCAGCTCAACCAGAGGA
GAAACCACGACCAGGAGTTGCATGGGGAGACCCTCGGGCCTTCCACGGGG
TAGCAGCAAGTGCTGGGGGAAGCGTCCGTTCTCGCCGACCAGCTGTTGGA
TACCCACGACCTGTTGCGCCTGCTGACCCTTCAATTGCAGCATCACTTGG
CGGTAGATCTCCACCAGGGGCGTCACATCGCTAGTTGTCCAGGGGATATC
GATGGACCTGCGATGAATGCGGTTGCGTCCATTCTCCAGCTGCACTTGGA
TGGCATCGAGAAGAACGAAGTCACGTCGGCGCTCATCCAGGGAAGCTCCT
TGCCTTCCCTGTTGATCCTCTGCGGGTCCCAGGAAGATGCGAATAATAGC
ATCCTGATCCTGATCCGAAGTGATGTCCATGTCAATGGTGAAGGCCTTGT
TGTTGAGGCGACGCTGGCGTCCCACAATCTCCTGCTGGATGCCCTGAACC
TGCTGCTCGACCAAGTTGCTCAGGTCCAATTCGTGCTCCTCGATGCGAGT
GCGCAGTTTATCCACACGAACATCGTTGATCGAAACACCGCGCATCTGCA
GTTGCTCCTGGCGGTAGCCTCCAAGGATTTGTTCACGCTGTTCGTCCACG
ATCCTCACAATCCGGCGCAGGGTGTACTGCACGACGGGATCGCTGAGGCG
GATGCCCAAGCCAGTACGATCGATTTGCTCAATGTTGTTGT

BS15034.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:12:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG17285-PA 3090 Fbp1-RA 2216..3086 891..21 4355 100 Minus
CG17285-PB 2994 Fbp1-RB 2120..2990 891..21 4355 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:14:53
Subject Length Description Subject Range Query Range Score Percent Strand
Fbp1-RD 3399 CG17285-RD 2304..3178 891..17 4360 99.9 Minus
Fbp1-RB 3465 CG17285-RB 2370..3244 891..17 4360 99.9 Minus
Fbp1-RA 3405 CG17285-RA 2310..3184 891..17 4360 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:14:45
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14094810..14095684 17..891 4360 99.9 Plus
Blast to na_te.dros performed on 2015-02-10 22:14:49 has no hits.

BS15034.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:15:11 Download gff for BS15034.3prime
Subject Subject Range Query Range Percent Splice Strand
Fbp1-PA 2216..3090 17..891 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:48:01 Download gff for BS15034.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17285-PB 2120..2994 17..891 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 11:20:17 Download gff for BS15034.3prime
Subject Subject Range Query Range Percent Splice Strand
Fbp1-RA 2310..3187 11..891 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:04:56 Download gff for BS15034.3prime
Subject Subject Range Query Range Percent Splice Strand
Fbp1-RA 2310..3187 11..891 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:04:56 Download gff for BS15034.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 14094807..14095684 11..891 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 11:20:17 Download gff for BS15034.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14087907..14088784 11..891 99   Plus

BS15034.5prime Sequence

866 bp (721 high quality bases) assembled on 2006-10-23

> BS15034.5prime
GAAGTTATCCGTCGACATGAACAGAATCATGCTGTTGGTGGCCTTTGCGG
CCGGCGTTGTGGCTGCTGGAAGGATAACTACGAATCAGGACAGGGTCCAG
GGTATTGACCGCATGTCCTTGGAGGATCTGCAGCTCCAAAAGTTTATCCT
GGATATCGTCCAGAATATTCGTCAGCCTCTACAGCAGAGTGAGCTCATCA
ATCTAGATGTGGGTCTGATTGCAGACAGTCAGCGTTATCGTGGCGGCATT
GATAAGGTGATGCATAACGTCATCGATCTGGATCGCCAGCGTCGCCTCCT
CGACGAGCACCAGGTGTACTCCGTGGGTCGTTTGGAGCATGTGCAGCAGC
TGCGTGGCATATACCGCCTGCTGGCTCGCGCCCAGGACTTTGACACCCTT
CGCCGTAATGTGGTCTACCTGCGCCGTAACATTAACCCTGTCCTGCTGGT
TAATGCCTTGGCTCTGGCCATTCGCGATCGTGAGGACACTCAAGCTCTGA
TCGTGCCCGCTGTCCAGGAGCTGCTCCCCGAACTGTATCTGGATGAGGAA
GTGATTCAGCAGGTGCGCAGCGTCCTAAGGGAACAAACCCAGCGCCCATC
GCTCATGGACATCGTGGGTATGCGCCAGCGGGCTATGAACCCAGTGATGA
GCATCCTGATGCCCTGGAGGGAGATCCACATGCAGATGGCTCTAAGGAAA
CAGCAGAACATCCAGAACGTTTTGGGCCAGAAACGCGTCGTTGTCCGTGC
CGAGAACCAGGGACAGGTTGAGGGCACCTCTCTGCTGACGGACGATATTG
AGTTGCAGAACTTTGTTCAAAATCTCATACAGGAACTTGCCCTTCTGGAA
GATGTTACTCAGTTGG

BS15034.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:12:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG17285-PA 3090 Fbp1-RA 1..850 17..866 4225 99.8 Plus
CG17285-PB 2994 Fbp1-RB 1..754 113..866 3745 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:37:47
Subject Length Description Subject Range Query Range Score Percent Strand
Fbp1-RA 3405 CG17285-RA 95..944 17..866 4235 99.9 Plus
Fbp1-RD 3399 CG17285-RD 95..938 17..866 4135 99.2 Plus
Fbp1-RB 3465 CG17285-RB 245..1004 107..866 3785 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:37:46
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14097050..14097809 866..107 3785 99.9 Minus
3L 28110227 3L 14097869..14097959 107..17 455 100 Minus
Blast to na_te.dros performed 2015-02-13 12:37:46
Subject Length Description Subject Range Query Range Score Percent Strand
Burdock 6411 Burdock DMU89994 6411bp Derived from U89994 (g1905850) (Rel. 51, Last updated, Version 1). 1821..1849 601..629 109 86.2 Plus

BS15034.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:15:12 Download gff for BS15034.5prime
Subject Subject Range Query Range Percent Splice Strand
Fbp1-PA 1..850 17..866 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:48:02 Download gff for BS15034.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17285-PA 1..850 17..866 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:03:14 Download gff for BS15034.5prime
Subject Subject Range Query Range Percent Splice Strand
Fbp1-RA 90..944 12..866 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:17:13 Download gff for BS15034.5prime
Subject Subject Range Query Range Percent Splice Strand
Fbp1-RA 90..944 12..866 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:17:13 Download gff for BS15034.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 14097050..14097808 108..866 99 <- Minus
3L 14097869..14097964 12..107 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:03:14 Download gff for BS15034.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14090150..14090908 108..866 99 <- Minus
arm_3L 14090969..14091064 12..107 97   Minus

BS15034.complete Sequence

3122 bp assembled on 2008-08-14

GenBank Submission: KX806538

> BS15034.complete
GAAGTTATCCGTCGACATGAACAGAATCATGCTGTTGGTGGCCTTTGCGG
CCGGCGTTGTGGCTGCTGGAAGGATAACTACGAATCAGGACAGGGTCCAG
GGTATTGACCGCATGTCCTTGGAGGATCTGCAGCTCCAAAAGTTTATCCT
GGATATCGTCCAGAATATTCGTCAGCCTCTACAGCAGAGTGAGCTCATCA
ATCTAGATGTGGGTCTGATTGCAGACAGTCAGCGTTATCGTGGCGGCATT
GATAAGGTGATGCATAACGTCATCGATCTGGATCGCCAGCGTCGCCTCCT
CGACGAGCACCAGGTGTACTCCGTGGGTCGTTTGGAGCATGTGCAGCAGC
TGCGTGGCATATACCGCCTGCTGGCTCGCGCCCAGGACTTTGACACCCTT
CGCCGTAATGTGGTCTACCTGCGCCGTAACATTAACCCTGTCCTGCTGGT
TAATGCCTTGGCTCTGGCCATTCGCGATCGTGAGGACACTCAAGCTCTGA
TCGTGCCCGCTGTCCAGGAGCTGCTCCCCGAACTGTATCTGGATGAGGAA
GTGATTCAGCAGGTGCGCAGCGTCCTAAGGGAACAAACCCAGCGCCCATC
GCTCATGGACATCGTGGGTATGCGCCAGCGGGCTATGAACCCAGTGATGA
GCATCCTGATGCCCTGGAGGGAGATCCACATGCAGATGGCTCTAAGGAAA
CAGCAGAACATCCAGAACGTTTTGGGCCAGAAACGCGTCGTTGTCCGTGC
CGAGAACCAGGGACAGGTTGAGGGCACCTCTCTGCTGACGGACGATATTG
AGTTGCAGAACTTTGTTCAAAATCTCATACAGGAACTTGCCCTTCTGGAG
GATGTTACTCAGTTGGAGCAGAGCCAATTGATCAACAATGATCAACGTGA
AGAGCAATGGGTCGGTCGTCAGCGCGTGCAGTACCAAGATAACAACCAGG
AAAGAGATCTGGGTCAGGATGTAGACACTGGACGCCTACTCCGTGTGAGT
CGCCGCCGCCTTCTGGAGCAACAGGATGAATATCAGGGTCAGAACATCTA
TGGAAACCAAAAGGATCGTTTCCAGCGTCTCCTCCGCCGGGATGACGACA
ACGACGACAATGATGACGATGATGATCAGGATATTCGCATGGGTCGTGTC
CAGCTGCAGCGTGGTATCAGCCAGGGAGGTCTCCGCATTGGAGGAGCTCA
TAACCTGCCCACCGTTAGCGTGAACAGTGACCGTCTGCTTCACGTGAGCC
GTCGCCGTTTGAACGCCATCCAACAAGATCAGCAGCAGGATCAGCTGAAC
GGTCGCCAGCGTTTCATGGGTTTGGTGAGAGGAGACCGCCTCAGTGAGGG
TCGTCGTGTTGGTCAGCTGGATGATGTGCGTCAGGAGCGTCAGAACAACT
GGCAGAAGCAGGACTACATCTTGACACAAGGTCGCACTTTCGGAGTCCAG
CAGGAGCGTCAAAACTATGCCGATCAGTTGGAGAGCGTGAGCCGCGACGA
CGAGCGATTGGTGCATATTAACCGACGCCGCCTCAACCAGGACAACCAGG
ACATCCAGCAACAACAGATGCATTTTCCCCGCAGGATTAACTCCATTGGC
GAGGGTCGCCGCGTCATGGGTGAGCGCCCCATCCAAGATGAGGACATTCT
GAAGCTAATCCGCGGCGAAAACCGTCTGAAGCTGATGACCGATGATGAGA
TCCTTGAGATGCTGCAAAGGAACCGCCAGCAGCGTCTGCAAAAGCACCAG
AACGATGATGATGACGATGTCAACGATGACGATGTGAATGTGGTGCACCG
ACAGGGACTACGAAGCCGCCGCAGCCTTCCCAATCTCCGTCAGCAAAACA
ACCGCCTCAGCGAAATTGTCCTGCACAATCTTCGCCAGCTGGTCGCACGT
CTTAACCAGGAAAGCATCGCCCAGGGACAGCTGATCGAAGAGCAGCAGCA
GTTGATCAACAATCCCCGCCTGACGCAATCCGAGCGATATGCCCTCCGCT
TGAACCAAATCCGAATCAATTCCCAGCGCAGCCGTCAAGTCCTCGCCCAG
ATCGGCCAGATTGAGCAGCGTATCCAGGAGGTTATTGGTCAGGTGCTGAA
CCAGGTGAATGTCAACTCGCTGCGTGGCCAGGTAATCGATCAACGCCAAG
TGGAATCCCTGATCGCCGATGTACTGCTGGGTCGCCTTGGTCAGGTTGGC
ATCATGACCATTATCCGCCAGGTGGTCCAGGACAACAACATTGAGCAAAT
CGATCGTACTGGCTTGGGCATCCGCCTCAGCGATCCCGTCGTGCAGTACA
CCCTGCGCCGGATTGTGAGGATCGTGGACGAACAGCGTGAACAAATCCTT
GGAGGCTACCGCCAGGAGCAACTGCAGATGCGCGGTGTTTCGATCAACGA
TGTTCGTGTGGATAAACTGCGCACTCGCATCGAGGAGCACGAATTGGACC
TGAGCAACTTGGTCGAGCAGCAGGTTCAGGGCATCCAGCAGGAGATTGTG
GGACGCCAGCGTCGCCTCAACAACAAGGCCTTCACCATTGACATGGACAT
CACTTCGGATCAGGATCAGGATGCTATTATTCGCATCTTCCTGGGACCCG
CAGAGGATCAACAGGGAAGGCAAGGAGCTTCCCTGGATGAGCGCCGACGT
GACTTCGTTCTTCTCGATGCCATCCAAGTGCAGCTGGAGAATGGACGCAA
CCGCATTCATCGCAGGTCCATCGATATCCCCTGGACAACTAGCGATGTGA
CGCCCCTGGTGGAGATCTACCGCCAAGTGATGCTGCAATTGAAGGGTCAG
CAGGCGCAACAGGTCGTGGGTATCCAACAGCTGGTCGGCGAGAACGGACG
CTTCCCCCAGCACTTGCTGCTACCCCGTGGAAGGCCCGAGGGTCTCCCCA
TGCAACTCCTGGTCGTGGTTTCTCCTCTGGTTGAGCTGCAGGTTCAGGAC
GTCGTTCCCGCTATCACCATTGGCATTGGCTCCGCCTCTCTTCGTGATGC
CCGCCCATTGGGTTATCCTCTGGACCGGCCCATCCATAACGAGCAGGAGC
TCCTGCAGTTGACCAATGTCCTGCTTCAGGATGTGGTCATCATTCAGGAG
AACTAAAAGCTTTCTAGACCAT

BS15034.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:03:33
Subject Length Description Subject Range Query Range Score Percent Strand
Fbp1-RA 3090 CG17285-PA 1..3090 17..3106 15450 100 Plus
Fbp1-RD 3084 CG17285-PD 1..3084 17..3106 15325 99.8 Plus
Fbp1-RB 2994 CG17285-PB 1..2994 113..3106 14970 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:03:34
Subject Length Description Subject Range Query Range Score Percent Strand
Fbp1-RA 3405 CG17285-RA 95..3184 17..3106 15450 100 Plus
Fbp1-RD 3399 CG17285-RD 95..3178 17..3106 15325 99.8 Plus
Fbp1-RB 3465 CG17285-RB 245..3244 107..3106 15000 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:03:31
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14094810..14097809 3106..107 15000 100 Minus
3L 28110227 3L 14097869..14097959 107..17 455 100 Minus
Blast to na_te.dros performed on 2014-11-28 01:03:32 has no hits.

BS15034.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:48:28 Download gff for BS15034.complete
Subject Subject Range Query Range Percent Splice Strand
Fbp1-RA 93..3190 12..3112 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:37:46 Download gff for BS15034.complete
Subject Subject Range Query Range Percent Splice Strand
Fbp1-RA 95..3182 17..3104 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:13:57 Download gff for BS15034.complete
Subject Subject Range Query Range Percent Splice Strand
Fbp1-RA 98..3185 17..3104 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:43:27 Download gff for BS15034.complete
Subject Subject Range Query Range Percent Splice Strand
Fbp1-RA 95..3182 17..3104 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:43:27 Download gff for BS15034.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14094812..14097808 108..3104 100 <- Minus
3L 14097869..14097959 17..107 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:37:46 Download gff for BS15034.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14087912..14090908 108..3104 100 <- Minus
arm_3L 14090969..14091059 17..107 100   Minus

BS15034.pep Sequence

Translation from 16 to 3105

> BS15034.pep
MNRIMLLVAFAAGVVAAGRITTNQDRVQGIDRMSLEDLQLQKFILDIVQN
IRQPLQQSELINLDVGLIADSQRYRGGIDKVMHNVIDLDRQRRLLDEHQV
YSVGRLEHVQQLRGIYRLLARAQDFDTLRRNVVYLRRNINPVLLVNALAL
AIRDREDTQALIVPAVQELLPELYLDEEVIQQVRSVLREQTQRPSLMDIV
GMRQRAMNPVMSILMPWREIHMQMALRKQQNIQNVLGQKRVVVRAENQGQ
VEGTSLLTDDIELQNFVQNLIQELALLEDVTQLEQSQLINNDQREEQWVG
RQRVQYQDNNQERDLGQDVDTGRLLRVSRRRLLEQQDEYQGQNIYGNQKD
RFQRLLRRDDDNDDNDDDDDQDIRMGRVQLQRGISQGGLRIGGAHNLPTV
SVNSDRLLHVSRRRLNAIQQDQQQDQLNGRQRFMGLVRGDRLSEGRRVGQ
LDDVRQERQNNWQKQDYILTQGRTFGVQQERQNYADQLESVSRDDERLVH
INRRRLNQDNQDIQQQQMHFPRRINSIGEGRRVMGERPIQDEDILKLIRG
ENRLKLMTDDEILEMLQRNRQQRLQKHQNDDDDDVNDDDVNVVHRQGLRS
RRSLPNLRQQNNRLSEIVLHNLRQLVARLNQESIAQGQLIEEQQQLINNP
RLTQSERYALRLNQIRINSQRSRQVLAQIGQIEQRIQEVIGQVLNQVNVN
SLRGQVIDQRQVESLIADVLLGRLGQVGIMTIIRQVVQDNNIEQIDRTGL
GIRLSDPVVQYTLRRIVRIVDEQREQILGGYRQEQLQMRGVSINDVRVDK
LRTRIEEHELDLSNLVEQQVQGIQQEIVGRQRRLNNKAFTIDMDITSDQD
QDAIIRIFLGPAEDQQGRQGASLDERRRDFVLLDAIQVQLENGRNRIHRR
SIDIPWTTSDVTPLVEIYRQVMLQLKGQQAQQVVGIQQLVGENGRFPQHL
LLPRGRPEGLPMQLLVVVSPLVELQVQDVVPAITIGIGSASLRDARPLGY
PLDRPIHNEQELLQLTNVLLQDVVIIQEN*

BS15034.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:47:45
Subject Length Description Subject Range Query Range Score Percent Strand
Fbp1-PA 1029 CG17285-PA 1..1029 1..1029 5153 100 Plus
Fbp1-PD 1027 CG17285-PD 1..1027 1..1029 5130 99.8 Plus
Fbp1-PB 997 CG17285-PB 1..997 33..1029 4999 100 Plus
Lsp1alpha-PA 816 CG2559-PA 346..780 610..1025 358 28.1 Plus
Lsp1gamma-PA 772 CG6821-PA 315..729 612..1006 333 28 Plus
Lsp1alpha-PA 816 CG2559-PA 33..192 38..198 192 26.1 Plus