Clone Sequence Records
BS15040.complete Sequence
1094 bp assembled on 2010-02-09
GenBank Submission: KX804752
> BS15040.complete
GAAGTTATCAGTCGACATGGAGTCGAGGGTCACCAGCGGCACAGGTCCAC
CGAACACCATTATGATCCAGCTGGTGTCCCAACAGCCCAGTTCCTGTGGA
CAGATGCAGGCCATGCCCATTTCGGTGCAGACGATACCCTTGTTCCCCAA
TTCCAGAACATCGACAGAGCGACCTTGTCGATCGGTCTCCATTGCCCCGA
ATGTAAGACCTCCAACGGATGTCCCTCCTCCTCGAAGGAATTTAAGAATC
CGACCCGAGGAATATGCGACACCCAAGCGGAAGAATTCGCAAAGCCAGTT
TCGTCATTTCTCCCGCAGCATAAACCAACCTCCACCGGTGTACTATGTTC
TTCGACCAGAAGACCGTATTATGCCCATCTACATACCACCTCCGAGGTTT
AACAATGAGCAAGGATCAAGGATGGCGACGGAGTGTCCTTGCTGTGGCCA
TGCCAAGTCATTGAACCCGGAGGAACCTCTAAGAGTCCACGTAGCGCAGA
AAGAGTTTGTCAAATTAGAGAAGGCAACTCCTGGACATCGGGATCAATGT
ACTAACACCATTGACCAGCCAGATGTGGGAAATATAAGGACGATTTACGA
AACATTGGGACGCGCAATGGTCACTGCAGCCGTGGAGGCAGCCCAGAGAT
CCCAGCCAGCAGGACCCTCAGATCCGACAAATGTAATATTGAAACTATTA
ACCCAATTGGGGGAGCAGAATCAAACAACAGGCTTGAGTCCACATTCAGA
AGCAGTAGCAGAAAGTCCCGACCACCAACCACATATGCGCAGGCCCAAAG
CTAGCTTTACGGAAGCAGTCCGCATGATGGAGAGGACCTCGTCTGATCCT
TCCATTGCTAAAGGGCCACCAGATGAGCTAGATGACCAACGTAGGCTTCC
ATCTGTACTCTCCGATGGTCGTCTTCGCGTCGAATATCCGAAAACGCCTA
GACCAACACCAACATACTCCGTCGAATCTGAAAACACCCTCAGTAATCAT
ATGTCCTCGGAGAGATTAAGACTCGATTCTGGTTCCTCGCCAAACCTGGG
AAACTCCATTGGACATAGCCAAGCGTAGAAGCTTTCTAGACCAT
BS15040.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:05:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13385-RA | 1062 | CG13385-PA | 1..1062 | 17..1078 | 5310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:05:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13385-RA | 1238 | CG13385-RA | 92..1153 | 17..1078 | 5310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:05:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8396740..8397801 | 17..1078 | 5310 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:05:39 has no hits.
BS15040.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:10:58 Download gff for
BS15040.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13385-RA | 28..1089 | 17..1078 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:26:44 Download gff for
BS15040.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13385-RA | 28..1089 | 17..1078 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:15:41 Download gff for
BS15040.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13385-RA | 28..1089 | 17..1078 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:10:46 Download gff for
BS15040.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13385-RA | 92..1153 | 17..1078 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:10:46 Download gff for
BS15040.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8396740..8397801 | 17..1078 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:26:44 Download gff for
BS15040.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8396740..8397801 | 17..1078 | 100 | | Plus |
BS15040.3prime Sequence
868 bp (739 high quality bases) assembled on 2006-10-23
> BS15040.3prime
ATGGTCTAGAAAGCTTCTACGCTTGGCTATGTCCAATGGAGTTTCCCAGG
TTTGGCGAGGAACCAGAATCGAGTCTTAATCTCTCCGAGGACATATGATT
ACTGAGGGTGTTTTCAGATTCGACGGAGTATGTTGGTGTTGGTCTAGGCG
TTTTCGGATATTCGACGCGAAGACGACCATCGGAGAGTACAGATGGAAGC
CTACGTTGGTCATCTAGCTCATCTGGTGGCCCTTTAGCAATGGAAGGATC
AGACGAGGTCCTCTCCATCATGCGGACTGCTTCCGTAAAGCTAGCTTTGG
GCCTGCGCATATGTGGTTGGTGGTCGGGACTTTCTGCTACTGCTTCTGAA
TGTGGACTCAAGCCTGTTGTTTGATTCTGCTCCCCCAATTGGGTTAATAG
TTTCAATATTACATTTGTCGGATCTGAGGGTCCTGCTGGCTGGGATCTCT
GGGCTGCCTCCACGGCTGCAGTGACCATTGCGCGTCCCAATGTTTCGTAA
ATCGTCCTTATATTTCCCACATCTGGCTGGTCAATGGTGTTAGTACATTG
ATCCCGATGTCCAGGAGTTGCCTTCTCTAATTTGACAAACTCTTTCTGCG
CTACGTGGACTCTTAGAGGTTCCTCCGGGTTCAATGACTTGGCATGGCCA
CAGCAAGGACACTCCGTCGCCATCCTTGATCCTTGCTCATTGTTAAACCT
CGGAGGTGGTATGTAGATGGGCATAATACGGTCTTCTGGTCGAAGAACAT
AGTACACCGGTGGAGGTTGGTTTATGCTGCGGGAGAAATGACGAAACTGG
CTTTTGCGATTCTTCCGCTTGGGTGTCGCATATTCCTCGGGTCGGATTCT
AAATTCCTTCGAGGAGGA
BS15040.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13385-PA | 1062 | CG13385-RA | 275..1062 | 804..17 | 3940 | 100 | Minus |
| CG13385-PA | 1062 | CG13385-RA | 229..270 | 850..809 | 210 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:07:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13385-RA | 1238 | CG13385-RA | 301..1153 | 868..17 | 4195 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:07:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8396949..8397801 | 868..17 | 4155 | 99.4 | Minus |
Blast to na_te.dros performed on 2015-02-13 07:07:04 has no hits.
BS15040.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:15:20 Download gff for
BS15040.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13385-PA | 211..1062 | 17..867 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:48:13 Download gff for
BS15040.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13385-PA | 211..1062 | 17..867 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 20:50:32 Download gff for
BS15040.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13385-RA | 238..1089 | 17..867 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:25:41 Download gff for
BS15040.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13385-RA | 302..1153 | 17..867 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:25:41 Download gff for
BS15040.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8396950..8397801 | 17..867 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 20:50:32 Download gff for
BS15040.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8396950..8397801 | 17..867 | 99 | | Minus |
BS15040.5prime Sequence
910 bp (826 high quality bases) assembled on 2006-10-23
> BS15040.5prime
GAAGTTATCCGTCGACATGGAGTCGAGGGTCACCAGCGGCACAGGTCCAC
CGAACACCATTATGATCCAGCTGGTGTCCCAACAGCCCAGTTCCTGTGGA
CAGATGCAGGCCATGCCCATTTCGGTGCAGACGATACCCTTGTTCCCCAA
TTCCAGAACATCGACAGAGCGACCTTGTCGATCGGTCTCCATTGCCCCGA
ATGTAAGACCTCCAACGGATGTCCCTCCTCCTCGAAGGAATTTAAGAATC
CGACCCGAGGAATATGCGACACCCAAGCGGAAGAATTCGCAAAGCCAGTT
TCGTCATTTCTCCCGCAGCATAAACCAACCTCCACCGGTGTACTATGTTC
TTCGACCAGAAGACCGTATTATGCCCATCTACATACCACCTCCGAGGTTT
AACAATGAGCAAGGATCAAGGATGGCGACGGAGTGTCCTTGCTGTGGCCA
TGCCAAGTCATTGAACCCGGAGGAACCTCTAAGAGTCCACGTAGCGCAGA
AAGAGTTTGTCAAATTAGAGAAGGCAACTCCTGGACATCGGGATCAATGT
ACTAACACCATTGACCAGCCAGATGTGGGAAATATAAGGACGATTTACGA
AACATTGGGACGCGCAATGGTCACTGCAGCCGTGGAGGCAGCCCAGAGAT
CCCAGCCAGCAGGACCCTCAGATCCGACAAATGTAATATTGAAACTATTA
ACCCAATTGGGGGAGCAGAATCAAACAACAGGCTTGAGTCCACATTCAGA
AGCAGTAGCAGAAAGTCCCGACCACCAACCACATATGCGCAGGCCCAAAG
CTAGCTTTACGGAAGCAGTCCGCATGATGGAGAGGACCTCGTCTGATCCT
TCCATTGCTAAAGGGCCACCAGATGAGCTAGATGAACAACGTAAGCTTCC
ATCTGTACTC
BS15040.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13385-PA | 1062 | CG13385-RA | 1..894 | 17..910 | 4420 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:38:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13385-RA | 1238 | CG13385-RA | 92..985 | 17..910 | 4440 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:38:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8396740..8397633 | 17..910 | 4440 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-13 12:38:10 has no hits.
BS15040.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:15:21 Download gff for
BS15040.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13385-PA | 1..894 | 17..910 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:48:14 Download gff for
BS15040.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13385-PA | 1..894 | 17..910 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:03:18 Download gff for
BS15040.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13385-RA | 26..921 | 13..910 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:17:58 Download gff for
BS15040.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13385-RA | 90..985 | 13..910 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:17:58 Download gff for
BS15040.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8396738..8397633 | 13..910 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:03:18 Download gff for
BS15040.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8396738..8397633 | 13..910 | 99 | | Plus |
BS15040.pep Sequence
Translation from 16 to 1077
> BS15040.pep
MESRVTSGTGPPNTIMIQLVSQQPSSCGQMQAMPISVQTIPLFPNSRTST
ERPCRSVSIAPNVRPPTDVPPPRRNLRIRPEEYATPKRKNSQSQFRHFSR
SINQPPPVYYVLRPEDRIMPIYIPPPRFNNEQGSRMATECPCCGHAKSLN
PEEPLRVHVAQKEFVKLEKATPGHRDQCTNTIDQPDVGNIRTIYETLGRA
MVTAAVEAAQRSQPAGPSDPTNVILKLLTQLGEQNQTTGLSPHSEAVAES
PDHQPHMRRPKASFTEAVRMMERTSSDPSIAKGPPDELDDQRRLPSVLSD
GRLRVEYPKTPRPTPTYSVESENTLSNHMSSERLRLDSGSSPNLGNSIGH
SQA*
BS15040.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:10:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13385-PA | 353 | CG13385-PA | 1..353 | 1..353 | 1857 | 100 | Plus |
