Clone BS15045 Report

Search the DGRC for BS15045

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:150
Well:45
Vector:pDNR-Dual
Associated Gene/TranscriptCG18031-RA
Protein status:BS15045.pep: full length peptide match
Sequenced Size:1547

Clone Sequence Records

BS15045.3prime Sequence

810 bp (721 high quality bases) assembled on 2006-10-23

> BS15045.3prime
ATGGTCTAGAAAGCTTCTAGAAGAGATGCGCCAGATAGCTTCTCCAAAGC
CAGAGGATCAGCTTGTAAAGCAAAAAGAGGCGAAGCAGCCGGTAGAGGAA
CACCTTGATCCTTAAGATTCTCTTGGAACGCTCCAGAGTTTTCGGATCTT
CTCGAAGCAAGTGCGTTCGGATACTGTGGAGCATGTTGCTGCAGGATTGG
ATCACCAGGCCATGGATGTCCGGATGGTTGAAGGCATCGAAGTTGAATGC
AGAACCCTCGCCGTGCTTGGACAGCGTCTCCATGTCCGAAACCCCGGGAC
TGTCCCAATTGTTGAACATGAAGGGCTGCATCACCTCCAGCGTTTGGTAG
GCCTTGCGAACCGCACTCATCAGCACGGGCTTCTGACCGAAAATCCTTAG
AAGCAAGTCGAGAATAAGGGCCGGCAGGATCTGCTTGGTAAAGACGAGAA
ACTGGTAGGCCCACCGTTTGTCCGTGTAGTGGCAGCCCGGGATCATCAGG
TTCTTTTCAAATGCCACATCCCGCCACAAGTCCAGCGTGTCCATCTGCTC
GGCAATCTGGGTGAAGGTGTGCGGCACGTGGGTGCAAGACGAGGACAGGA
AAACTGGCAGATCAGCCGGTGGGCCCTGCCTGTAAATATCGTAGCCCATT
TTGGTGTAACACAGCATGCTCTTGATGCCAATGTCCTGCGGCGTGATGTC
CAATCGAATGTCCTTGCCCAGGTAAACAGTCTTGAGGATTCCAGCGCCGA
CCAGCGCGAACAGTCCCATGGCGCCCATCAAGGATGGCGAGAATCCGGGC
GATGGGTCCT

BS15045.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG18031-PA 1515 CG18031-RA 722..1515 810..17 3970 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:27:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG18031-RA 1681 CG18031-RA 793..1587 810..16 3975 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:27:20
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2202273..2202828 255..810 2780 100 Plus
X 23542271 X 2202060..2202207 108..255 740 100 Plus
X 23542271 X 2201914..2202005 16..107 460 100 Plus
Blast to na_te.dros performed on 2015-02-10 16:27:24 has no hits.

BS15045.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:15:32 Download gff for BS15045.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18031-PA 722..1515 17..810 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:48:27 Download gff for BS15045.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18031-PA 722..1515 17..810 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:28:53 Download gff for BS15045.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18031-RA 731..1527 12..810 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:43:36 Download gff for BS15045.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18031-RA 793..1589 12..810 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:43:36 Download gff for BS15045.3prime
Subject Subject Range Query Range Percent Splice Strand
X 2201912..2202005 12..107 97 <- Plus
X 2202060..2202206 108..254 100 <- Plus
X 2202273..2202828 255..810 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:28:53 Download gff for BS15045.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2095945..2096038 12..107 97 <- Plus
arm_X 2096093..2096239 108..254 100 <- Plus
arm_X 2096306..2096861 255..810 100   Plus

BS15045.5prime Sequence

838 bp (794 high quality bases) assembled on 2006-10-23

> BS15045.5prime
GAAGTTATCCTTCGACATGCACCATCCACTATCCGGGGAAATGGAGGAAT
TCTTCGAGGATAGCGAAATATTCGTGACGGGCGGATCGGGAGTGGTGGGC
AAGGCGCTGGTCGAGAAGCTCCTGCGCTCCTGCAACGTTCGGCGCATCTA
CGTCCTGCTGCGTCCTCGCAAACAGCTAACAGCGGAGCAGAGACTCGTCC
GACTGCGGCAGGCCACTGTCTTCCACGTACTGGCCGTACAAAAACCCGAA
GAGCTGGACAAGATCGTGGCGGTCCCGGGCGACGTCTCTTTGCCGGGACT
GGGCATCGATCCCTCGATGATGCAGCGTATGAAAGGTGTTTCCCTGGTCT
ACCACTGTGCCGCCACGGTGCGATTCGATGAGCCGCTTCGCGAGGCAGTA
CGTCTGAATGTCGGAGGCACCTTGGAGGCGCTTAAGTTCGCCGAGACTCT
GCCCCAGCTGAGGGCCTTCATCCACGTTTCCACATTCTACAGTAATCCCT
ATTTGACACGTGTGGAGCCCAAGTACTACTCCTCGCCGATGGACTGGCGG
TTGTGCCTCCGAATGATCGACGATGTCGCAGACGACGGGATGCTCAACGC
GTTAACAAGAAAGTTGATCATGGGCTTTCCCAACACGTATACGTTTACCA
AAAACCTGGCCGAATCCCTGGTGAATGACTACCGCCATCGGCTGCCAGTA
ATAGTGTATCGTCCTTCCATAGTTCTCTTTGCCGTGGAGGACCCATCGCC
CGGATTCTCGCCATCCTTGATGGGCGCCATGGGACTGTTCGCGCTGGTCG
GCGCTGGAATCCTCAAGACTGTTTACCTGGGCAAGGAC

BS15045.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG18031-PA 1515 CG18031-RA 1..822 17..838 4110 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:14:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG18031-RA 1681 CG18031-RA 72..893 17..838 4110 100 Plus
CG4020-RB 1886 CG4020-RB 230..309 53..132 190 84 Plus
CG4020-RA 1750 CG4020-RA 94..173 53..132 190 84 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:14:13
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2203289..2203795 523..17 2535 100 Minus
X 23542271 X 2202728..2202845 838..721 590 100 Minus
X 23542271 X 2202899..2203008 722..613 550 100 Minus
X 23542271 X 2203131..2203223 614..522 465 100 Minus
Blast to na_te.dros performed on 2015-02-13 06:14:14 has no hits.

BS15045.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:15:33 Download gff for BS15045.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18031-PA 1..822 17..838 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:48:29 Download gff for BS15045.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18031-PA 1..822 17..838 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:53:03 Download gff for BS15045.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18031-RA 5..831 12..838 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:18:47 Download gff for BS15045.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18031-RA 67..893 12..838 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:18:47 Download gff for BS15045.5prime
Subject Subject Range Query Range Percent Splice Strand
X 2202728..2202843 723..838 100 <- Minus
X 2202899..2203008 613..722 100 <- Minus
X 2203133..2203221 524..612 100 <- Minus
X 2203289..2203800 12..523 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:53:03 Download gff for BS15045.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2096761..2096876 723..838 100 <- Minus
arm_X 2096932..2097041 613..722 100 <- Minus
arm_X 2097166..2097254 524..612 100 <- Minus
arm_X 2097322..2097833 12..523 99   Minus

BS15045.complete Sequence

1547 bp assembled on 2008-08-14

GenBank Submission: KX800530

> BS15045.complete
GAAGTTATCCTTCGACATGCACCATCCACTATCCGGGGAAATGGAGGAAT
TCTTCGAGGATAGCGAAATATTCGTGACGGGCGGATCGGGAGTGGTGGGC
AAGGCGCTGGTCGAGAAGCTCCTGCGCTCCTGCAACGTTCGGCGCATCTA
CGTCCTGCTGCGTCCTCGCAAACAGCTAACAGCGGAGCAGAGACTCGTCC
GACTGCGGCAGGCCACTGTCTTCCACGTACTGGCCGTACAAAAACCCGAA
GAGCTGGACAAGATCGTGGCGGTCCCGGGCGACGTCTCTTTGCCGGGACT
GGGCATCGATCCCTCGATGATGCAGCGTATGAAAGGTGTTTCCCTGGTCT
ACCACTGTGCCGCCACGGTGCGATTCGATGAGCCGCTTCGCGAGGCAGTA
CGTCTGAATGTCGGAGGCACCTTGGAGGCGCTTAAGTTCGCCGAGACTCT
GCCCCAGCTGAGGGCCTTCATCCACGTTTCCACATTCTACAGTAATCCCT
ATTTGACACGTGTGGAGCCCAAGTACTACTCCTCGCCGATGGACTGGCGG
TTGTGCCTCCGAATGATCGACGATGTCGCAGACGACGGGATGCTCAACGC
GTTAACAAGAAAGTTGATCATGGGCTTTCCCAACACGTATACGTTTACCA
AAAACCTGGCCGAATCCCTGGTGAATGACTACCGCCATCGGCTGCCAGTA
ATAGTGTATCGTCCTTCCATAGTTCTCTTTGCCGTGGAGGACCCATCGCC
CGGATTCTCGCCATCCTTGATGGGCGCCATGGGACTGTTCGCGCTGGTCG
GCGCTGGAATCCTCAAGACTGTTTACCTGGGCAAGGACATTCGATTGGAC
ATCACGCCGCAGGACATTGGCATCAAGAGCATGCTGTGTTACACCAAAAT
GGGCTACGATATTTACAGGCAGGGCCCACCGGCTGATCTGCCAGTTTTCC
TGTCCTCGTCTTGCACCCACGTGCCGCACACCTTCACCCAGATTGCCGAG
CAGATGGACACGCTGGACTTGTGGCGGGATGTGGCATTTGAAAAGAACCT
GATGATCCCGGGCTGCCACTACACGGACAAACGGTGGGCCTACCAGTTTC
TCGTCTTTACCAAGCAGATCCTGCCGGCCCTTATTCTCGACTTGCTTCTA
AGGATTTTCGGTCAGAAGCCCGTGCTGATGAGTGCGGTTCGCAAGGCCTA
CCAAACGCTGGAGGTGATGCAGCCCTTCATGTTCAACAATTGGGACAGTC
CCGGGGTTTCGGACATGGAGACGCTGTCCAAGCACGGCGAGGGTTCTGCA
TTCAACTTCGATGCCTTCAACCATCCGGACATCCATGGCCTGGTGATCCA
ATCCTGCAGCAACATGCTCCACAGTATCCGAACGCACTTGCTTCGAGAAG
ATCCGAAAACTCTGGAGCGTTCCAAGAGAATCTTAAGGATCAAGGTGTTC
CTCTACCGGCTGCTTCGCCTCTTTTTGCTTTACAAGCTGATCCTCTGGCT
TTGGAGAAGCTATCTGGCGCATCTCTTCTAGAAGCTTTCTAGACCAT

BS15045.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:40:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG18031-RA 1515 CG18031-PA 1..1515 17..1531 7575 100 Plus
CG4020-RB 1485 CG4020-PB 19..98 53..132 190 82.5 Plus
CG4020-RA 1485 CG4020-PA 19..98 53..132 190 82.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:40:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG18031-RA 1681 CG18031-RA 72..1587 17..1532 7580 100 Plus
CG4020-RB 1886 CG4020-RB 230..309 53..132 190 82.5 Plus
CG4020-RA 1750 CG4020-RA 94..173 53..132 190 82.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:40:53
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2202273..2202845 1293..721 2865 100 Minus
X 23542271 X 2203289..2203795 523..17 2535 100 Minus
X 23542271 X 2202060..2202207 1440..1293 740 100 Minus
X 23542271 X 2202899..2203008 722..613 550 100 Minus
X 23542271 X 2203131..2203223 614..522 465 100 Minus
X 23542271 X 2201914..2202005 1532..1441 460 100 Minus
Blast to na_te.dros performed on 2014-11-27 16:40:54 has no hits.

BS15045.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:47:46 Download gff for BS15045.complete
Subject Subject Range Query Range Percent Splice Strand
CG18031-RA 5..1527 12..1536 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:54:12 Download gff for BS15045.complete
Subject Subject Range Query Range Percent Splice Strand
CG18031-RA 10..1524 17..1531 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:09:08 Download gff for BS15045.complete
Subject Subject Range Query Range Percent Splice Strand
CG18031-RA 10..1524 17..1531 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:24:10 Download gff for BS15045.complete
Subject Subject Range Query Range Percent Splice Strand
CG18031-RA 72..1586 17..1531 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:24:10 Download gff for BS15045.complete
Subject Subject Range Query Range Percent Splice Strand
X 2202060..2202206 1294..1440 100 <- Minus
X 2201915..2202005 1441..1531 100 <- Minus
X 2202273..2202843 723..1293 100 <- Minus
X 2202899..2203008 613..722 100 <- Minus
X 2203133..2203221 524..612 100 <- Minus
X 2203289..2203795 17..523 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:54:12 Download gff for BS15045.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 2095948..2096038 1441..1531 100 <- Minus
arm_X 2096093..2096239 1294..1440 100 <- Minus
arm_X 2096306..2096876 723..1293 100 <- Minus
arm_X 2096932..2097041 613..722 100 <- Minus
arm_X 2097166..2097254 524..612 100 <- Minus
arm_X 2097322..2097828 17..523 100   Minus

BS15045.pep Sequence

Translation from 16 to 1530

> BS15045.pep
MHHPLSGEMEEFFEDSEIFVTGGSGVVGKALVEKLLRSCNVRRIYVLLRP
RKQLTAEQRLVRLRQATVFHVLAVQKPEELDKIVAVPGDVSLPGLGIDPS
MMQRMKGVSLVYHCAATVRFDEPLREAVRLNVGGTLEALKFAETLPQLRA
FIHVSTFYSNPYLTRVEPKYYSSPMDWRLCLRMIDDVADDGMLNALTRKL
IMGFPNTYTFTKNLAESLVNDYRHRLPVIVYRPSIVLFAVEDPSPGFSPS
LMGAMGLFALVGAGILKTVYLGKDIRLDITPQDIGIKSMLCYTKMGYDIY
RQGPPADLPVFLSSSCTHVPHTFTQIAEQMDTLDLWRDVAFEKNLMIPGC
HYTDKRWAYQFLVFTKQILPALILDLLLRIFGQKPVLMSAVRKAYQTLEV
MQPFMFNNWDSPGVSDMETLSKHGEGSAFNFDAFNHPDIHGLVIQSCSNM
LHSIRTHLLREDPKTLERSKRILRIKVFLYRLLRLFLLYKLILWLWRSYL
AHLF*

BS15045.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:48:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG18031-PA 504 CG18031-PA 1..504 1..504 2629 100 Plus
CG4020-PB 494 CG4020-PB 5..494 11..496 719 35.5 Plus
CG4020-PA 494 CG4020-PA 5..494 11..496 719 35.5 Plus
wat-PA 517 CG1443-PA 32..507 9..494 621 32 Plus
CG8306-PA 516 CG8306-PA 3..494 6..495 594 30.9 Plus