Clone Sequence Records
BS15052.complete Sequence
1370 bp assembled on 2009-12-07
GenBank Submission: KX805326
> BS15052.complete
GAAGTTATCAGTCGACATGAAACTAACTGTGGTCTGCTTAGTGGTAAGCT
TCTTTCTGCTGCACTATGCAGAGCACAGTGATGCCTGCTTGGAGGTAATT
GAGAAAGCGTTGGGTCTCCAACCGTGCAATGAAGGTGGTCGCAACGAACA
CAGGGAGCCTCACAGGGGTGGACCAGGACCTGTGAGATCTACTAGGAGGC
GCGGGAGAATCCCTAGGAGACGTGAGACACCAAGACCAATACATCACAAT
ACCAGAGAACGGAGGCATCACACAAAAACAAGGAAGCCTAGAAAACCCGT
TCCTTGTATTACGAAGAGGACGGAACCTCCACCGGTTACAGATTTTACTA
CTCGAAAATCCAATCCACCATGCACTTGTACTGAAAGCACTACTCGAAAG
ACAAATCCGACTTGTACTTGTACGGAAAGCACTACGAAAAAGACAAATCC
GACTTGTACTTGTACTGAAAGCACTACTCGAAAGACAAACCCGACTTGTA
CTTGTACAGAGAGCACTACTCCATGGACGGAACCACCAGTTACAGATATT
ACTACTCAAAAATCCAATCCACCATGCACTTGTACTGAAAGCACTACTCG
AAAGACAAATCCGACTTGTACTTGTACTGAAAGCACTACTCAAAAGACAA
ATCCGACTTGTACTTGTACGGAAAGCACTACTAAGAAGACAAACCCGACT
TGTACTTGCACAGAGAGCACTACTCCATTGACGGAACCACCGGTTACAGA
TATTACTACTCAAAAATCCAATCCACCATGCACTTGTACGGAAAGCACTA
CTCAAAAGATAAAGTCGACTAGTACTACTCAAGGGACTGAGCCACCAAGC
ACTCAGAAGACTCTTCCACCCAATCCACCAAGCACTAAGAACACCGAACC
ACCAAATAGCACTCCTCCTCCAGAGAAAACCACCCGAAAACCATGCGGAT
GTAGTAGCTCTCACCCGTCTGGATGGAATCCTGGCGGTCCTATAATCCCA
AGCTTTTCAACGACTACCAAGAAACCGGACGAATGTTCGACAAAACCTTC
AGGTTGGAATCCCGGAGGTCCGATTGTGACAATACCAACAACTTCTCGAA
CGCCCTGCGGGTGTGTCTCGTGGAATCCACCAGGTTGGAATCCCGGCGGT
CCTTGGCCTCCCACATTTCCCGGACCTTGCAGACCAGGACCTGTCATTCC
CAACAATGCAGAATGCGGATTCGATCCACAATGCCCACAAGGCTGGAATC
CCGATAGTCCTCTATTACCCGATCCCGAAATTCCCGGGAATTTTGGACCC
GGACCTGTCATTCCCCGCAGTGGAGAAAATGGATGTGGCTGCTCCTGCTC
GTGAAAGCTTTCTAGACCAT
BS15052.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:49:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eig71Ee-RA | 1338 | CG7604-PA | 1..1338 | 17..1354 | 6690 | 100 | Plus |
| Eig71Ee-RA | 1338 | CG7604-PA | 313..606 | 533..826 | 1185 | 93.5 | Plus |
| Eig71Ee-RA | 1338 | CG7604-PA | 517..810 | 329..622 | 1185 | 93.5 | Plus |
| Eig71Ee-RA | 1338 | CG7604-PA | 331..463 | 593..725 | 455 | 89.5 | Plus |
| Eig71Ee-RA | 1338 | CG7604-PA | 577..709 | 347..479 | 455 | 89.5 | Plus |
| Eig71Ee-RA | 1338 | CG7604-PA | 535..666 | 389..520 | 420 | 87.9 | Plus |
| Eig71Ee-RA | 1338 | CG7604-PA | 535..666 | 593..724 | 420 | 87.9 | Plus |
| Eig71Ee-RA | 1338 | CG7604-PA | 577..708 | 551..682 | 420 | 87.9 | Plus |
| Eig71Ee-RA | 1338 | CG7604-PA | 373..504 | 551..682 | 420 | 87.9 | Plus |
| Eig71Ee-RA | 1338 | CG7604-PA | 331..463 | 389..521 | 395 | 86.5 | Plus |
| Eig71Ee-RA | 1338 | CG7604-PA | 373..505 | 347..479 | 395 | 86.5 | Plus |
| Eig71Ee-RA | 1338 | CG7604-PA | 313..402 | 737..826 | 330 | 91.1 | Plus |
| Eig71Ee-RA | 1338 | CG7604-PA | 721..810 | 329..418 | 330 | 91.1 | Plus |
| Eig71Ee-RA | 1338 | CG7604-PA | 442..505 | 578..641 | 275 | 95.3 | Plus |
| Eig71Ee-RA | 1338 | CG7604-PA | 562..625 | 458..521 | 275 | 95.3 | Plus |
| Eig71Ee-RA | 1338 | CG7604-PA | 358..419 | 458..519 | 265 | 95.2 | Plus |
| Eig71Ee-RA | 1338 | CG7604-PA | 442..503 | 374..435 | 265 | 95.2 | Plus |
| Eig71Ee-RA | 1338 | CG7604-PA | 535..625 | 635..725 | 230 | 83.5 | Plus |
| Eig71Ee-RA | 1338 | CG7604-PA | 619..709 | 551..641 | 230 | 83.5 | Plus |
| Eig71Ee-RA | 1338 | CG7604-PA | 331..419 | 635..723 | 205 | 82 | Plus |
| Eig71Ee-RA | 1338 | CG7604-PA | 619..707 | 347..435 | 205 | 82 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:49:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eig71Ee-RA | 1486 | CG7604-RA | 24..1362 | 16..1354 | 6695 | 100 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 337..630 | 533..826 | 1185 | 93.5 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 541..834 | 329..622 | 1185 | 93.5 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 355..487 | 593..725 | 455 | 89.5 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 601..733 | 347..479 | 455 | 89.5 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 601..732 | 551..682 | 420 | 87.9 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 397..528 | 551..682 | 420 | 87.9 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 559..690 | 389..520 | 420 | 87.9 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 559..690 | 593..724 | 420 | 87.9 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 355..487 | 389..521 | 395 | 86.5 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 397..529 | 347..479 | 395 | 86.5 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 337..426 | 737..826 | 330 | 91.1 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 745..834 | 329..418 | 330 | 91.1 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 466..529 | 578..641 | 275 | 95.3 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 586..649 | 458..521 | 275 | 95.3 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 382..443 | 458..519 | 265 | 95.2 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 466..527 | 374..435 | 265 | 95.2 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 559..649 | 635..725 | 230 | 83.5 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 643..733 | 551..641 | 230 | 83.5 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 355..443 | 635..723 | 205 | 82 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 643..731 | 347..435 | 205 | 82 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:49:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15654596..15655906 | 1354..44 | 6555 | 100 | Minus |
| 3L | 28110227 | 3L | 15655124..15655417 | 622..329 | 1185 | 93.5 | Minus |
| 3L | 28110227 | 3L | 15655328..15655621 | 826..533 | 1185 | 93.5 | Minus |
| 3L | 28110227 | 3L | 15655225..15655357 | 479..347 | 455 | 89.5 | Minus |
| 3L | 28110227 | 3L | 15655471..15655603 | 725..593 | 455 | 89.5 | Minus |
| 3L | 28110227 | 3L | 15655226..15655357 | 682..551 | 420 | 87.9 | Minus |
| 3L | 28110227 | 3L | 15655268..15655399 | 724..593 | 420 | 87.9 | Minus |
| 3L | 28110227 | 3L | 15655268..15655399 | 520..389 | 420 | 87.9 | Minus |
| 3L | 28110227 | 3L | 15655430..15655561 | 682..551 | 420 | 87.9 | Minus |
| 3L | 28110227 | 3L | 15655429..15655561 | 479..347 | 395 | 86.5 | Minus |
| 3L | 28110227 | 3L | 15655471..15655603 | 521..389 | 395 | 86.5 | Minus |
| 3L | 28110227 | 3L | 15655124..15655213 | 418..329 | 330 | 91.1 | Minus |
| 3L | 28110227 | 3L | 15655532..15655621 | 826..737 | 330 | 91.1 | Minus |
| 3L | 28110227 | 3L | 15655309..15655372 | 521..458 | 275 | 95.3 | Minus |
| 3L | 28110227 | 3L | 15655429..15655492 | 641..578 | 275 | 95.3 | Minus |
| 3L | 28110227 | 3L | 15655431..15655492 | 435..374 | 265 | 95.2 | Minus |
| 3L | 28110227 | 3L | 15655515..15655576 | 519..458 | 265 | 95.2 | Minus |
| 3L | 28110227 | 3L | 15655225..15655315 | 641..551 | 230 | 83.5 | Minus |
| 3L | 28110227 | 3L | 15655309..15655399 | 725..635 | 230 | 83.5 | Minus |
| 3L | 28110227 | 3L | 15655227..15655315 | 435..347 | 205 | 82 | Minus |
| 3L | 28110227 | 3L | 15655515..15655603 | 723..635 | 205 | 82 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:49:40 has no hits.
BS15052.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:41:51 Download gff for
BS15052.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eig71Ee-RA | 21..1357 | 17..1353 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:58:55 Download gff for
BS15052.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eig71Ee-RA | 25..1361 | 17..1353 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:55:35 Download gff for
BS15052.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eig71Ee-RA | 21..1357 | 17..1353 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:57:47 Download gff for
BS15052.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eig71Ee-RA | 25..1361 | 17..1353 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:57:47 Download gff for
BS15052.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15654597..15655905 | 45..1353 | 100 | <- | Minus |
| 3L | 15655959..15655986 | 17..44 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:58:55 Download gff for
BS15052.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15647697..15649005 | 45..1353 | 100 | <- | Minus |
| arm_3L | 15649059..15649086 | 17..44 | 100 | | Minus |
BS15052.3prime Sequence
796 bp (751 high quality bases) assembled on 2006-10-23
> BS15052.3prime
ATGGTCTAGAAAGCTTTCACGAGCAGGAGCAGCCACATCCATTTTCTCCA
CTGCGGGGAATGACAGGTCCGGGTCCAAAATTCCCGGGAATTTCGGGATC
GGGTAATAGAGGACTATCGGGATTCCAGCCTTGTGGGCATTGTGGATCGA
ATCCGCATTCTGCATTGTTGGGAATGACAGGTCCTGGTCTGCAAGGTCCG
GGAAATGTGGGAGGCCAAGGACCGCCGGGATTCCAACCTGGTGGATTCCA
CGAGACACACCCGCAGGGCGTTCGAGAAGTTGTTGGTATTGTCACAATCG
GACCTCCGGGATTCCAACCTGAAGGTTTTGTCGAACATTCGTCCGGTTTC
TTGGTAGTCGTTGAAAAGCTTGGGATTATAGGACCGCCAGGATTCCATCC
AGACGGGTGAGAGCTACTACATCCGCATGGTTTTCGGGTGGTTTTCTCTG
GAGGAGGAGTGCTATTTGGTGGTTCGGTGTTCTTAGTGCTTGGTGGATTG
GGTGGAAGAGTCTTCTGAGTGCTTGGTGGCTCAGTCCCTTGAGTAGTACT
AGTCGACTTTATCTTTTGAGTAGTGCTTTCCGTACAAGTGCATGGTGGAT
TGGATTTTTGAGTAGTAATATCTGTAACCGGTGGTTCCGTCAATGGAGTA
GTGCTCTCTGTGCAAGTACAAGTCGGGTTTGTCTTCTTAGTAGTGCTTTC
CGTACAAGTACAAGTCGGATTTGTCTTTTGAGTAGTGCTTTCAGTACAAG
TACAAGTCGGATTTGTCTTTCGAGTAGTGCTTTCAGTACAAGTGCA
BS15052.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7604-PA | 1338 | Eig71Ee-RA | 559..1338 | 796..17 | 3900 | 100 | Minus |
| CG7604-PA | 1338 | Eig71Ee-RA | 466..589 | 685..562 | 495 | 95.9 | Minus |
| CG7604-PA | 1338 | Eig71Ee-RA | 355..462 | 796..689 | 440 | 96.2 | Minus |
| CG7604-PA | 1338 | Eig71Ee-RA | 358..463 | 751..646 | 355 | 93.3 | Minus |
| CG7604-PA | 1338 | Eig71Ee-RA | 423..504 | 770..689 | 310 | 95.1 | Minus |
| CG7604-PA | 1338 | Eig71Ee-RA | 313..385 | 634..562 | 265 | 94.5 | Minus |
| CG7604-PA | 1338 | Eig71Ee-RA | 442..505 | 793..730 | 245 | 95.3 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:27:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eig71Ee-RA | 1486 | CG7604-RA | 583..1362 | 796..17 | 3900 | 100 | Minus |
| Eig71Ee-RA | 1486 | CG7604-RA | 379..630 | 796..545 | 1020 | 93.7 | Minus |
| Eig71Ee-RA | 1486 | CG7604-RA | 355..487 | 778..646 | 455 | 89.5 | Minus |
| Eig71Ee-RA | 1486 | CG7604-RA | 559..690 | 778..647 | 420 | 87.9 | Minus |
| Eig71Ee-RA | 1486 | CG7604-RA | 424..528 | 793..689 | 405 | 92.4 | Minus |
| Eig71Ee-RA | 1486 | CG7604-RA | 628..732 | 793..689 | 405 | 92.4 | Minus |
| Eig71Ee-RA | 1486 | CG7604-RA | 337..426 | 634..545 | 330 | 91.1 | Minus |
| Eig71Ee-RA | 1486 | CG7604-RA | 466..529 | 793..730 | 275 | 95.3 | Minus |
| Eig71Ee-RA | 1486 | CG7604-RA | 559..649 | 736..646 | 230 | 83.5 | Minus |
| Eig71Ee-RA | 1486 | CG7604-RA | 355..443 | 736..648 | 205 | 82 | Minus |
| Eig71Ee-RA | 1486 | CG7604-RA | 670..733 | 793..730 | 200 | 87.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:27:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15654596..15655375 | 17..796 | 3900 | 100 | Plus |
| 3L | 28110227 | 3L | 15655328..15655579 | 545..796 | 1020 | 93.7 | Plus |
| 3L | 28110227 | 3L | 15655471..15655603 | 646..778 | 455 | 89.5 | Plus |
| 3L | 28110227 | 3L | 15655268..15655399 | 647..778 | 420 | 87.9 | Plus |
| 3L | 28110227 | 3L | 15655226..15655330 | 689..793 | 405 | 92.4 | Plus |
| 3L | 28110227 | 3L | 15655430..15655534 | 689..793 | 405 | 92.4 | Plus |
| 3L | 28110227 | 3L | 15655532..15655621 | 545..634 | 330 | 91.1 | Plus |
| 3L | 28110227 | 3L | 15655429..15655492 | 730..793 | 275 | 95.3 | Plus |
| 3L | 28110227 | 3L | 15655309..15655399 | 646..736 | 230 | 83.5 | Plus |
| 3L | 28110227 | 3L | 15655515..15655603 | 648..736 | 205 | 82 | Plus |
| 3L | 28110227 | 3L | 15655225..15655288 | 730..793 | 200 | 87.5 | Plus |
Blast to na_te.dros performed on 2015-02-11 03:27:19 has no hits.
BS15052.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:15:40 Download gff for
BS15052.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7604-PA | 560..1338 | 17..795 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:48:40 Download gff for
BS15052.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7604-PA | 560..1338 | 17..795 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 21:05:13 Download gff for
BS15052.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eig71Ee-RA | 584..1365 | 10..795 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:56:15 Download gff for
BS15052.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eig71Ee-RA | 584..1365 | 10..795 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:56:15 Download gff for
BS15052.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15654593..15655374 | 10..795 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 21:05:13 Download gff for
BS15052.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15647693..15648474 | 10..795 | 99 | | Plus |
BS15052.5prime Sequence
853 bp (758 high quality bases) assembled on 2006-10-23
> BS15052.5prime
GAAGTTATCCTTCGAGATGAAACTAACTGTGGTCTGCTTAGTGGTAAGCT
TCTTTCTGCTGCACTATGCAGAGCACAGTGATGCCTGCTTGGAGGTAATT
GAGAAAGCGTTGGGTCTCCAACCGTGCAATGAAGGTGGTCGCAACGAACA
CAGGGAGCCTCACAGGGGTGGACCAGGACCTGTGAGATCTACTAGGAGGC
GCGGGAGAATCCCTAGGAGACGTGAGACACCAAGACCAATACATCACAAT
ACCAGAGAACGGAGGCATCACACAAAAACAAGGAAGCCTAGAAAACCCGT
TCCTTGTATTACGAAGAGGACGGAACCTCCACCGGTTACAGATTTTACTA
CTCGAAAATCCAATCCACCATGCACTTGTACTGAAAGCACTACTCGAAAG
ACAAATCCGACTTGTACTTGTACGGAAAGCACTACGAAAAAGACAAATCC
GACTTGTACTTGTACTGAAAGCACTACTCGAAAGACAAACCCGACTTGTA
CTTGTACAGAGAGCACTACTCCATGGACGGAACCACCAGTTACAGATATT
ACTACTCAAAAATCCAATCCACCATGCACTTGTACTGAAAGCACTACTCG
AAAGACAAATCCGACTTGTACTTGTACTGAAAGCACTACTCAAAAGACAA
ATCCGACTTGTACTTGTACGGAAAGCACTACTAAGAAGACAAACCCGACT
TGTACTTGCACAGAGAGCACTACTCCATTGACGGAACCACCGGTTACAGA
TATTACTACTCCAAAATCCAATCCACCATGCACTTGTACGGAAAGCACTA
CTCAAAAGATAAAGTCGACTAGTACTACTCAAGGGACTGAGCCACCCAGC
ACT
BS15052.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7604-PA | 1338 | Eig71Ee-RA | 1..837 | 17..853 | 4135 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:22:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eig71Ee-RA | 1486 | CG7604-RA | 25..861 | 17..853 | 4155 | 99.8 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 541..834 | 329..622 | 1185 | 93.5 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 337..630 | 533..826 | 1170 | 93.2 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 355..690 | 389..724 | 625 | 79.8 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 397..732 | 347..682 | 625 | 79.8 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 355..487 | 593..725 | 455 | 89.5 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 601..733 | 347..479 | 455 | 89.5 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 397..528 | 551..682 | 420 | 87.9 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 559..690 | 389..520 | 420 | 87.9 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 337..426 | 737..826 | 330 | 91.1 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 745..834 | 329..418 | 330 | 91.1 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 382..649 | 458..725 | 325 | 75.5 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 466..733 | 374..641 | 325 | 75.5 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 466..529 | 578..641 | 275 | 95.3 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 586..649 | 458..521 | 275 | 95.3 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 355..443 | 635..723 | 205 | 82 | Plus |
| Eig71Ee-RA | 1486 | CG7604-RA | 643..731 | 347..435 | 205 | 82 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:22:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15655097..15655906 | 853..44 | 4020 | 99.8 | Minus |
| 3L | 28110227 | 3L | 15655124..15655417 | 622..329 | 1185 | 93.5 | Minus |
| 3L | 28110227 | 3L | 15655328..15655621 | 826..533 | 1170 | 93.2 | Minus |
| 3L | 28110227 | 3L | 15655225..15655357 | 479..347 | 455 | 89.5 | Minus |
| 3L | 28110227 | 3L | 15655471..15655603 | 725..593 | 455 | 89.5 | Minus |
| 3L | 28110227 | 3L | 15655226..15655357 | 682..551 | 420 | 87.9 | Minus |
| 3L | 28110227 | 3L | 15655268..15655399 | 724..593 | 420 | 87.9 | Minus |
| 3L | 28110227 | 3L | 15655268..15655399 | 520..389 | 420 | 87.9 | Minus |
| 3L | 28110227 | 3L | 15655430..15655561 | 682..551 | 420 | 87.9 | Minus |
| 3L | 28110227 | 3L | 15655429..15655561 | 479..347 | 395 | 86.5 | Minus |
| 3L | 28110227 | 3L | 15655471..15655603 | 521..389 | 395 | 86.5 | Minus |
| 3L | 28110227 | 3L | 15655124..15655213 | 418..329 | 330 | 91.1 | Minus |
| 3L | 28110227 | 3L | 15655532..15655621 | 826..737 | 330 | 91.1 | Minus |
| 3L | 28110227 | 3L | 15655309..15655372 | 521..458 | 275 | 95.3 | Minus |
| 3L | 28110227 | 3L | 15655429..15655492 | 641..578 | 275 | 95.3 | Minus |
| 3L | 28110227 | 3L | 15655431..15655492 | 435..374 | 265 | 95.2 | Minus |
| 3L | 28110227 | 3L | 15655515..15655576 | 519..458 | 265 | 95.2 | Minus |
| 3L | 28110227 | 3L | 15655225..15655315 | 641..551 | 230 | 83.5 | Minus |
| 3L | 28110227 | 3L | 15655309..15655399 | 725..635 | 230 | 83.5 | Minus |
| 3L | 28110227 | 3L | 15655227..15655315 | 435..347 | 205 | 82 | Minus |
| 3L | 28110227 | 3L | 15655515..15655603 | 723..635 | 205 | 82 | Minus |
Blast to na_te.dros performed on 2015-02-12 10:22:03 has no hits.
BS15052.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:15:41 Download gff for
BS15052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7604-PA | 1..837 | 17..853 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:48:41 Download gff for
BS15052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7604-PA | 1..837 | 17..853 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:56:21 Download gff for
BS15052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eig71Ee-RA | 19..861 | 11..853 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:55:14 Download gff for
BS15052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eig71Ee-RA | 19..861 | 11..853 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:55:14 Download gff for
BS15052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15655097..15655905 | 45..853 | 99 | <- | Minus |
| 3L | 15655959..15655992 | 11..44 | 91 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:56:21 Download gff for
BS15052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15648197..15649005 | 45..853 | 99 | <- | Minus |
| arm_3L | 15649059..15649092 | 11..44 | 91 | | Minus |
BS15052.pep Sequence
Translation from 16 to 1353
> BS15052.pep
MKLTVVCLVVSFFLLHYAEHSDACLEVIEKALGLQPCNEGGRNEHREPHR
GGPGPVRSTRRRGRIPRRRETPRPIHHNTRERRHHTKTRKPRKPVPCITK
RTEPPPVTDFTTRKSNPPCTCTESTTRKTNPTCTCTESTTKKTNPTCTCT
ESTTRKTNPTCTCTESTTPWTEPPVTDITTQKSNPPCTCTESTTRKTNPT
CTCTESTTQKTNPTCTCTESTTKKTNPTCTCTESTTPLTEPPVTDITTQK
SNPPCTCTESTTQKIKSTSTTQGTEPPSTQKTLPPNPPSTKNTEPPNSTP
PPEKTTRKPCGCSSSHPSGWNPGGPIIPSFSTTTKKPDECSTKPSGWNPG
GPIVTIPTTSRTPCGCVSWNPPGWNPGGPWPPTFPGPCRPGPVIPNNAEC
GFDPQCPQGWNPDSPLLPDPEIPGNFGPGPVIPRSGENGCGCSCS*
BS15052.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:44:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eig71Ee-PA | 445 | CG7604-PA | 1..445 | 1..445 | 2567 | 100 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 902..1264 | 86..440 | 341 | 32.1 | Plus |
| CG4835-PB | 1224 | CG4835-PB | 966..1165 | 97..289 | 330 | 45.6 | Plus |
| CG34220-PA | 726 | CG34220-PA | 25..301 | 98..362 | 318 | 32.4 | Plus |
| CG34220-PA | 726 | CG34220-PA | 55..420 | 82..428 | 305 | 27.8 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 333..599 | 99..364 | 305 | 32.7 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 353..688 | 57..387 | 303 | 31.2 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 374..736 | 53..387 | 301 | 29.9 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 234..553 | 57..366 | 294 | 32 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 52..522 | 34..443 | 291 | 25.9 | Plus |
| CG34220-PA | 726 | CG34220-PA | 236..551 | 66..362 | 289 | 29.9 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 287..640 | 71..387 | 287 | 29.9 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 321..655 | 57..383 | 283 | 30.1 | Plus |
| CG34220-PA | 726 | CG34220-PA | 29..269 | 114..396 | 282 | 31 | Plus |
| CG34220-PA | 726 | CG34220-PA | 139..526 | 99..420 | 280 | 27 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 470..784 | 86..387 | 278 | 30.3 | Plus |
| CG34220-PA | 726 | CG34220-PA | 371..636 | 44..319 | 275 | 30.3 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 678..967 | 86..364 | 259 | 28.9 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 582..896 | 86..387 | 257 | 29.5 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 694..1024 | 86..387 | 256 | 29.6 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 646..922 | 86..364 | 255 | 29.9 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 481..848 | 57..387 | 254 | 30.4 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 49..386 | 94..397 | 253 | 26.9 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 774..1090 | 86..397 | 246 | 28 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 742..1046 | 86..363 | 235 | 27.5 | Plus |
| CG4835-PB | 1224 | CG4835-PB | 1017..1157 | 86..228 | 218 | 44.3 | Plus |
| CG4835-PB | 1224 | CG4835-PB | 957..1169 | 148..365 | 212 | 32.6 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 993..1255 | 57..354 | 187 | 26.7 | Plus |
| CG34220-PA | 726 | CG34220-PA | 28..252 | 169..428 | 166 | 26 | Plus |
