Clone Sequence Records
BS15053.3prime Sequence
549 bp (549 high quality bases) assembled on 2006-10-23
> BS15053.3prime
ATGGTCTAGAAAGCTTCTAGACATAGGGATTCCAATTGCTGCCGTCCTCG
GGCAGCAAATTGTTGGTGATCAGGAGGATGACGTCGATGATCCACCAAAC
GCCCACGCCGCCCATGGTAAGCAGTTTGCCCACAGCCGTGCCCGTTTGAC
CGAGACAGAAGCGATCCATACCGAGGAAACCCAGCAGCATGCTGTAGATC
AGTGTGGTCACAAAGTAGTGATCCGTGTAGCGGACACAGGGCACTCCGGC
GCGCAGAAAGGTGCGATTACCGTAGCACTCGATGTCGGCAAACACGGTGC
ACCAGACCATGGCGTGCTCCACCTCTTCGTACGTGGAACCACCGAACTTC
AGGCATCCGTATTTCTTTTCCTGCTGCGCCGTGGCGTTCTCCCGATGATC
GACGGGATCCTTGCAATCGAGAAAGTCGCGCGGCAGAAACGAGCACATCA
CATTCGGTCCCAGTGGATAGAAGGCCGAGTTTCCAGCTCCGCCCGAGGCG
GAAGATGCCGAAGATGACGATGAGGAGGGTCCCATGTCGACTGATAACT
BS15053.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11103-PB | 519 | CG11103-RB | 1..519 | 535..17 | 2595 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:07:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11103-RB | 923 | CG11103-RB | 196..716 | 536..16 | 2605 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:07:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13782654..13783174 | 536..16 | 2605 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 07:07:08 has no hits.
BS15053.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:15:42 Download gff for
BS15053.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-PB | 1..519 | 17..535 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:48:42 Download gff for
BS15053.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-PB | 1..519 | 17..535 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 20:50:35 Download gff for
BS15053.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-RB | 191..716 | 16..544 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:25:48 Download gff for
BS15053.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-RB | 191..716 | 16..544 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:25:48 Download gff for
BS15053.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13782649..13783174 | 16..544 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 20:50:35 Download gff for
BS15053.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13676682..13677207 | 16..544 | 99 | | Minus |
BS15053.5prime Sequence
549 bp (549 high quality bases) assembled on 2006-10-23
> BS15053.5prime
GAAGTTATCCTTCGACATGGGACCCTCCTCATCGTCATCTTCGGCATCTT
CCGCCTCGGGCGGAGCTGGAAACTCGGCCTTCTATCCACTGGGACCGAAT
GTGATGTGCTCGTTTCTGCCGCGCGACTTTCTCGATTGCAAGGATCCCGT
CGATCATCGGGAGAACGCCACGGCGCAGCAGGAAAAGAAATACGGATGCC
TGAAGTTCGGTGGTTCCACGTACGAAGAGGTGGAGCACGCCATGGTCTGG
TGCACCGTGTTTGCCGACATCGAGTGCTACGGTAATCGCACCTTTCTGCG
CGCCGGAGTGCCCTGTGTCCGCTACACGGATCACTACTTTGTGACCACAC
TGATCTACAGCATGCTGCTGGGTTTCCTCGGTATGGATCGCTTCTGTCTC
GGTCAAACGGGCACGGCTGTGGGCAAACTGCTTACCATGGGCGGCGTGGG
CGTTTGGTGGATCATCGACGTCATCCTCCTGATCACCAACAATTTGCTGC
CCGAGGACGGCAGCAATTGGAATCCCTATGTCTAGAAGCTTTCTAGACC
BS15053.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11103-PB | 519 | CG11103-RB | 1..519 | 17..535 | 2595 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:51:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11103-RB | 923 | CG11103-RB | 196..716 | 16..536 | 2605 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:51:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13782654..13783174 | 16..536 | 2605 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 23:51:28 has no hits.
BS15053.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:15:43 Download gff for
BS15053.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-PB | 1..519 | 17..535 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:48:44 Download gff for
BS15053.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-PB | 1..519 | 17..535 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:21:46 Download gff for
BS15053.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-RB | 190..716 | 10..536 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:19:09 Download gff for
BS15053.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-RB | 190..716 | 10..536 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:19:09 Download gff for
BS15053.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13782648..13783174 | 10..536 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:21:46 Download gff for
BS15053.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13676681..13677207 | 10..536 | 99 | | Plus |
BS15053.complete Sequence
551 bp assembled on 2006-11-01
GenBank Submission: FJ637862
> BS15053.complete
GAAGTTATCAGTCGACATGGGACCCTCCTCATCGTCATCTTCGGCATCTT
CCGCCTCGGGCGGAGCTGGAAACTCGGCCTTCTATCCACTGGGACCGAAT
GTGATGTGCTCGTTTCTGCCGCGCGACTTTCTCGATTGCAAGGATCCCGT
CGATCATCGGGAGAACGCCACGGCGCAGCAGGAAAAGAAATACGGATGCC
TGAAGTTCGGTGGTTCCACGTACGAAGAGGTGGAGCACGCCATGGTCTGG
TGCACCGTGTTTGCCGACATCGAGTGCTACGGTAATCGCACCTTTCTGCG
CGCCGGAGTGCCCTGTGTCCGCTACACGGATCACTACTTTGTGACCACAC
TGATCTACAGCATGCTGCTGGGTTTCCTCGGTATGGATCGCTTCTGTCTC
GGTCAAACGGGCACGGCTGTGGGCAAACTGCTTACCATGGGCGGCGTGGG
CGTTTGGTGGATCATCGACGTCATCCTCCTGATCACCAACAATTTGCTGC
CCGAGGACGGCAGCAATTGGAATCCCTATGTCTAGAAGCTTTCTAGACCA
T
BS15053.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:22:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11103-RB | 519 | CG11103-PB | 1..519 | 17..535 | 2595 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:22:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11103-RB | 923 | CG11103-RB | 196..716 | 16..536 | 2605 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:22:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13782654..13783174 | 16..536 | 2605 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:22:35 has no hits.
BS15053.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:21:16 Download gff for
BS15053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-RB | 1..519 | 17..535 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:53:07 Download gff for
BS15053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-RB | 137..662 | 8..536 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:13:26 Download gff for
BS15053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-RB | 197..715 | 17..535 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:21:16 Download gff for
BS15053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-RB | 137..662 | 8..536 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:09:22 Download gff for
BS15053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-RB | 197..715 | 17..535 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:09:22 Download gff for
BS15053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13782655..13783173 | 17..535 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:13:26 Download gff for
BS15053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13676688..13677206 | 17..535 | 100 | | Plus |
BS15053.pep Sequence
Translation from 16 to 534
> BS15053.pep
MGPSSSSSSASSASGGAGNSAFYPLGPNVMCSFLPRDFLDCKDPVDHREN
ATAQQEKKYGCLKFGGSTYEEVEHAMVWCTVFADIECYGNRTFLRAGVPC
VRYTDHYFVTTLIYSMLLGFLGMDRFCLGQTGTAVGKLLTMGGVGVWWII
DVILLITNNLLPEDGSNWNPYV*
BS15053.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:36:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11103-PB | 172 | CG11103-PB | 1..172 | 1..172 | 939 | 100 | Plus |
amx-PB | 284 | CG12127-PB | 195..281 | 79..166 | 184 | 45.5 | Plus |
amx-PA | 284 | CG12127-PA | 195..281 | 79..166 | 184 | 45.5 | Plus |
CG10795-PA | 178 | CG10795-PA | 34..150 | 41..166 | 173 | 35.9 | Plus |