Clone BS15055 Report

Search the DGRC for BS15055

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:150
Well:55
Vector:pDNR-Dual
Associated Gene/TranscriptCG7031-RA
Protein status:BS15055.pep: full length peptide match
Sequenced Size:1460

Clone Sequence Records

BS15055.3prime Sequence

801 bp (799 high quality bases) assembled on 2006-10-23

> BS15055.3prime
ATGGTCTAGAAAGCTTCTACCACCAGCTCTTGACCTTGTGCAGCACTGTC
TTGAAGACGGGCACCTTCACGGGAAACGGCTTGGGCACCTTGATGGGCAC
ATATTTGACCACATGATAGGGCACATGCTTCTCCACCGGTACTGGGATGT
GTTTCTCCACGGGCACAGGAATCAGTCGCTCCACTGGAACCTTTAATTCC
TTCTCCACCGGCACGTGAACATTCTTGGTGATCGGTATGTGAATGGGCAC
TGGCTTGCGAACCGGTATGATGACCGCATGCGATATGGGTATCTTCACCT
CCTTCTCCACCGGCACGTGCTGCTTCTTCACATGCTTCACCGGCACATAG
TTAATGATATCCACATGATGCGAGTGATGGGTGTGTCCCTGGCCATGACC
ACTTGCCTCCGACAAGTAGTTGGAGCTCTGCTCCTGCCCAGCATCGGGAT
GCTCCTCAAAGTCATCAGCACCAGATCCGCTCGAGGCAGATGAAGCCGAT
GATGCAGCGGATCCAGAAATGGATGGTTCATGGTGGCCGAAATACGAAGA
GTGCTGTTCCTGTTCCTGGCGCTGCTGCTGCTGCTGCTGCTGTTGGTGGT
ACAGTTGCTGCTGTTGCTGCTGCAGCTGCTGCAGATGCTGTTGCTGTTGC
TGCTGTTGTTGGTGTTGCAACTGCTGGTGGTAAAGCTGCCCCTGCTGGTC
ATCGTATCCAGAGTCCTGCATGTACGGCGGCAGGAAATTTCCCATTGAAA
TTTTATCGTACGCATAGGGATGAGCCGCCTGCTGTTCCGGCTGCTGCTCC
T

BS15055.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG7031-PA 1428 CG7031-RA 644..1428 801..17 3925 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:14:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG7031-RC 2594 CG7031-RC 706..1492 801..15 3935 100 Minus
CG7031-RB 2597 CG7031-RB 709..1495 801..15 3935 100 Minus
CG7031-RA 1796 CG7031-RA 709..1495 801..15 3935 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:14:26
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22805402..22806188 801..15 3935 100 Minus
Blast to na_te.dros performed on 2015-02-11 17:14:30 has no hits.

BS15055.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:15:47 Download gff for BS15055.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7031-PA 644..1428 17..801 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:48:49 Download gff for BS15055.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7031-PA 644..1428 17..801 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:53:37 Download gff for BS15055.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7031-RA 709..1500 6..801 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:11:22 Download gff for BS15055.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7031-RA 709..1500 6..801 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:11:22 Download gff for BS15055.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 22805402..22806193 6..801 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:53:37 Download gff for BS15055.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18631124..18631915 6..801 99   Minus

BS15055.5prime Sequence

817 bp (762 high quality bases) assembled on 2006-10-23

> BS15055.5prime
GAAGTTATCCTTCGAGATGGCGAACGTTAATTTGCAGATGCCGCTGATTG
CAGCAGCCACCACCATACTGACAATTGTCAGTGCGGCCACCGCCAGCACC
ACATCCTCGACAGAGACGGCCAAGAACCAGCCATTGTATCACAATATGGG
GTCTTTGTTCGAGAATCGATGGCTGCCAATGGATCAGCCGATGCAGCATC
ATCCCAATCATCGGTATGGCTCGTCCAAAATTCCACGGGCAAATGCGGGT
GAAAGGAGGGCCTTTAGCAGCGGCCATTCCTCAGGCTCCCGGCAAGGATT
GGCCCATATGCTCAACGGACTAACAAATCTCTCGGGCCTGGGACACATTT
CCAATGGGTATGGCTCGGTGGCGCCCACCCATACGGAGGCACTGGCCCTG
GGCTCCACCAAACAGGAGATACCGATTTACGAGGACCACAATGAAGATGC
CACCGCGGTGGCTGCCGTTGCAGCAGCTGGAGCCCATGATTTTGGCTCGG
GAAATGAACAATCTGGCGGTGGATTGGAGAACAATCAAGAACATTCGCCG
ATTTACAATTATCCCGGTGCCGCACATAATGGTGGATTTTTGCCAGCCTA
CGGTTCAGCTGGATCTGGTCACGAGCAGGACTACGCACAGTGGTCATCAT
CGGCGCCGGAGGAGCAGCAGCCGGAACAGCAGGCGGCTCATCCCTATGCG
TACGATAAAATTTCAATGGGAAATTTCCTGCCGCCGTACATGCAGGACTC
TGGATACGATGACCAGCAAGGGCAGCTTTACCACCAGCAGTTGCAACACC
AACAACAGCAGCAACAG

BS15055.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG7031-PA 1428 CG7031-RA 1..801 17..817 3955 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:26:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG7031-RB 2597 CG7031-RB 66..866 17..817 3975 99.8 Plus
CG7031-RA 1796 CG7031-RA 66..866 17..817 3975 99.8 Plus
CG7031-RC 2594 CG7031-RC 66..863 17..817 3920 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:26:00
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22804776..22805559 34..817 3890 99.7 Plus
Blast to na_te.dros performed 2015-02-11 03:26:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6732..6786 762..816 149 74.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6753..6807 762..816 149 74.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2300..2357 760..817 146 72.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6801..6856 762..817 145 73.2 Plus
roo 9092 roo DM_ROO 9092bp 1080..1138 762..817 144 74.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2317..2378 756..817 139 69.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..6765 773..816 139 79.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6768..6823 762..817 136 71.4 Plus
roo 9092 roo DM_ROO 9092bp 1095..1146 765..816 134 73.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2365..2419 762..816 131 70.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2605..2659 762..816 131 70.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6724..6769 772..817 131 76.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6807..6861 762..816 131 70.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1544..1587 772..815 130 77.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2487..2539 764..816 130 71.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1511..1570 757..816 129 68.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1528..1583 762..817 127 69.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6852..6907 762..817 127 69.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2764..2818 762..816 122 69.1 Plus
roo 9092 roo DM_ROO 9092bp 1057..1093 781..817 122 81.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6835..6883 772..817 121 75.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2336 787..817 119 87.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6867..6918 765..816 116 69.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2317..2369 762..817 111 69.6 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 979..1011 780..812 111 81.8 Plus

BS15055.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:15:48 Download gff for BS15055.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7031-PA 1..801 17..817 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:48:50 Download gff for BS15055.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7031-PA 1..801 17..817 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 21:04:59 Download gff for BS15055.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7031-RA 62..866 9..817 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:50:52 Download gff for BS15055.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7031-RA 62..866 9..817 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:50:52 Download gff for BS15055.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 22804777..22805559 35..817 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 21:04:59 Download gff for BS15055.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18630499..18631281 35..817 99   Plus

BS15055.complete Sequence

1460 bp assembled on 2009-08-24

GenBank Submission: KX802996

> BS15055.complete
GAAGTTATCAGTCGACATGGCGAACGTTAATTTGCAGATGCCGCTGATTG
CAGCAGCCACCACCATACTGACAATTGTCAGTGGGGCCACCGCCAGCACC
ACATCCTCGACAGAGACGGCCAAGAACCAGCCATTGTATCACAATATGGG
GTCTTTGTTCGAGAATCGATGGCTGCCAATGGATCAGCCGATGCAGCATC
ATCCCAATCATCGGTATGGCTCGTCCAAAATTCCACGGGCAAATGCGGGT
GAAAGGAGGGCCTTTAGCAGCGGCCATTCCTCAGGCTCCCGGCAAGGATT
GGCCCATATGCTCAACGGACTAACAAATCTCTCGGGCCTGGGACACATTT
CCAATGGGTATGGCTCGGTGGCGCCCACCCATACGGAGGCACTGGCCCTG
GGCTCCACCAAACAGGAGATACCGATTTACGAGGACCACAATGAAGATGC
CACCGCGGTGGCTGCCGTTGCAGCAGCTGGAGCCCATGATTTTGGCTCGG
GAAATGAACAATCTGGCGGTGGATTGGAGAACAATCAAGAACATTCGCCG
ATTTACAATTATCCCGGTGCCGCACATAATGGTGGATTTTTGCCAGCCTA
CGGTTCAGCTGGATCTGGTCACGAGCAGGACTACGCACAGTGGTCATCAT
CGGCGCCGGAGGAGCAGCAGCCGGAACAGCAGGCGGCTCATCCCTATGCG
TACGATAAAATTTCAATGGGAAATTTCCTGCCGCCGTACATGCAGGACTC
TGGATACGATGACCAGCAGGGGCAGCTTTACCACCAGCAGTTGCAACACC
AACAACAGCAGCAACAGCAACAGCATCTGCAGCAGCTGCAGCAGCAACAG
CAGCAACTGTACCACCAACAGCAGCAGCAGCAGCAGCAGCGCCAGGAACA
GGAACAGCACTCTTCGTATTTCGGCCACCATGAACCATCCATTTCTGGAT
CCGCTGCATCATCGGCTTCATCTGCCTCGAGCGGATCTGGTGCTGATGAC
TTTGAGGAGCATCCCGATGCTGGGCAGGAGCAGAGCTCCAACTACTTGTC
GGAGGCAAGTGGTCATGGCCAGGGACACACCCATCACTCGCATCATGTGG
ATATCATTAACTATGTGCCGGTGAAGCATGTGAAGAAGCAGCACGTGCCG
GTGGAGAAGGAGGTGAAGATACCCATATCGCATGCGGTCATCATACCGGT
TCGCAAGCCAGTGCCCATTCACATACCGATCACCAAGAATGTTCACGTGC
CGGTGGAGAAGGAATTAAAGGTTCCAGTGGAGCGACTGATTCCTGTGCCC
GTGGAGAAACACATCCCAGTACCGGTGGAGAAGCATGTGCCCTATCATGT
GGTCAAATATGTGCCCATCAAGGTGCCCAAGCCGTTTCCCGTGAAGGTGC
CCGTCTTCAAGACAGTGCTGCACAAGGTCAAGAGCTGGTGGTAGAAGCTT
TCTAGACCAT

BS15055.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:36:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG7031-RB 1428 CG7031-PB 1..1428 17..1444 7140 100 Plus
CG7031-RA 1428 CG7031-PA 1..1428 17..1444 7140 100 Plus
CG7031-RC 1425 CG7031-PC 1..1425 17..1444 7060 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:36:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG7031-RB 2597 CG7031-RB 66..1495 17..1446 7150 100 Plus
CG7031-RA 1796 CG7031-RA 66..1495 17..1446 7150 100 Plus
CG7031-RC 2594 CG7031-RC 66..1492 17..1446 7070 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:36:50
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22804776..22806188 34..1446 7065 100 Plus
Blast to na_te.dros performed on 2014-11-28 01:36:50 has no hits.

BS15055.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-26 17:03:43 Download gff for BS15055.complete
Subject Subject Range Query Range Percent Splice Strand
CG7031-RA 66..1493 17..1444 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:52:44 Download gff for BS15055.complete
Subject Subject Range Query Range Percent Splice Strand
CG7031-RA 66..1493 17..1444 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:52:44 Download gff for BS15055.complete
Subject Subject Range Query Range Percent Splice Strand
CG7031-RA 66..1493 17..1444 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:52:44 Download gff for BS15055.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22804777..22806186 35..1444 100   Plus
3R 22804356..22804373 17..34 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:52:44 Download gff for BS15055.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18630078..18630095 17..34 100 -> Plus
arm_3R 18630499..18631908 35..1444 100   Plus

BS15055.pep Sequence

Translation from 16 to 1443

> BS15055.pep
MANVNLQMPLIAAATTILTIVSGATASTTSSTETAKNQPLYHNMGSLFEN
RWLPMDQPMQHHPNHRYGSSKIPRANAGERRAFSSGHSSGSRQGLAHMLN
GLTNLSGLGHISNGYGSVAPTHTEALALGSTKQEIPIYEDHNEDATAVAA
VAAAGAHDFGSGNEQSGGGLENNQEHSPIYNYPGAAHNGGFLPAYGSAGS
GHEQDYAQWSSSAPEEQQPEQQAAHPYAYDKISMGNFLPPYMQDSGYDDQ
QGQLYHQQLQHQQQQQQQQHLQQLQQQQQQLYHQQQQQQQQRQEQEQHSS
YFGHHEPSISGSAASSASSASSGSGADDFEEHPDAGQEQSSNYLSEASGH
GQGHTHHSHHVDIINYVPVKHVKKQHVPVEKEVKIPISHAVIIPVRKPVP
IHIPITKNVHVPVEKELKVPVERLIPVPVEKHIPVPVEKHVPYHVVKYVP
IKVPKPFPVKVPVFKTVLHKVKSWW*

BS15055.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:36:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG7031-PB 475 CG7031-PB 1..475 1..475 2535 100 Plus
CG7031-PA 475 CG7031-PA 1..475 1..475 2535 100 Plus
CG7031-PC 474 CG7031-PC 1..474 1..475 2518 99.8 Plus
CG13840-PC 466 CG13840-PC 29..447 54..470 336 27.5 Plus
CG33299-PC 172 CG33299-PC 15..172 318..474 252 34.4 Plus