Clone BS15058 Report

Search the DGRC for BS15058

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:150
Well:58
Vector:pDNR-Dual
Associated Gene/TranscriptCG6749-RA
Protein status:BS15058.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15058.3prime Sequence

907 bp (842 high quality bases) assembled on 2006-10-23

> BS15058.3prime
ATGGTCTAGAAAGCTTTCAGTCTTGAGCTGCACTGGCATCGTCATCGAAA
GCATCCGCCTCCACCTGTTCACCCTGGAAATCGCCCAAAATTCCCAGGCG
TCGTACCGCCTGCAAATTCTGGATGCAGTAGTCCACATTGGTCACTATGC
ACAGGGGTCGTTCGCCCTTGTAGTAGCCCGTGTTATCGCGCAGATAGACC
ACATCCCTGGTGGCCAGCCAGTGTTGCAGCTTCACGAAGCAAGGACACTG
CCAGGGATTACCCTCGATGGCCACGCGCTTAAGGTTCGGGAAGCTCACAT
TCACCTTGGCCAGAAAGGTAAGGCGATTGTTGTCCACTAGGATCTCCTGT
ACGCTACTCAGGCTCTCCAGCACATCGAGGTTGATCTCCTCCAGCAGATT
GTGACCCAAGTGGAGCTTCTGAAGACGCCGCATTGGTGCAAACATGCGCA
CGTCCAAGGATTTCAGTTCGTTGTGACCCAGTTTTAGGTATTCCAAAAAT
GGTAACGATGAGAAAGCCAGTGGATGCAGATGCTTCATACGATTGCCATT
CAGGTTGAGCCTTCGCATGCGCGGCAAGGTGTTGCCTCCGAAGATCTGTT
CCTCCAGGAATTCCAAGTTATTGTACGACAGATCCAAGGTGTCCAGGTTC
AGCAGGGCGGCAAAGGTGGCCGGTTTGATTTCCAATATAGCATTGTACTG
CAGATACAGCTTCCGTAGTGAGCCCAAGCCCACAAAGTGAGCAGGACTGA
GGCTGGCGATGCTGTTCCTGGACACATCCAGCATCTGCAGTCTGGCCAAC
ACTCTGAACTGGTTGTCGAACAGCAGGCGGATGCGATTGCCGGACAAATC
CAGCTGCTGTAGATGCAACACAAAGTTCTGAACCGCTCAAAACACATTTG
GACGCAG

BS15058.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG6749-PA 1659 CG6749-RA 769..1659 907..17 4430 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:29:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG6749-RA 1834 CG6749-RA 774..1664 907..17 4440 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:28:52
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9731408..9732298 17..907 4440 99.9 Plus
Blast to na_te.dros performed on 2015-02-10 16:28:55 has no hits.

BS15058.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:15:53 Download gff for BS15058.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6749-PA 769..1659 17..907 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:48:57 Download gff for BS15058.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6749-PA 769..1659 17..907 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:29:08 Download gff for BS15058.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6749-RA 774..1669 12..907 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:21:08 Download gff for BS15058.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6749-RA 774..1669 12..907 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:21:08 Download gff for BS15058.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 9731403..9732298 12..907 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:29:08 Download gff for BS15058.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9724503..9725398 12..907 99   Plus

BS15058.5prime Sequence

874 bp (761 high quality bases) assembled on 2006-10-23

> BS15058.5prime
GAAGTTATCAGTCGACATGTCGCAGACTGCCAACTGGGTTCTGCCGCTTT
TGCTGTGGCTTCTCTGCATGGGATTCCCCATTCTGCATGGCGCCGATCTC
TGCCAGCCCATCGGATGGCGGAACTTCCAGTGCAGCGAGGTCGCTTCTCT
GCAGGATCTGGTGGACTTGGGCGCCGAAAACTGGCACACGCTCGCCATAC
GGAATGTGCAAACGGAACTGGAGGTGGGATCAGGCGAAAATGCCGATCAC
TTGGCCAACTTGCTAGACTTGGATCTGACTGGCGCGGCTCCAATAAATGT
GCATACCAACGGATTTTCCATTCTGCCCAATCTGCGGCAACTGAATCTCA
GTGGCTGCGGTCTCGTTGACATCCGGGGAAATCACTTTGCGCCTGAGTCA
GCGCTCCAGCGGATCGATTTTAGTCACAATCAAATGGAGCTTCTGGATCG
CGACTTTTTTGGCAATCTAAGGAAATTGATCTATGCGAATTTTTCGCACA
ATGCTCTAAAGCAATGCGATCTGCCGCACATGCCACTGCTAAATCGACTG
GAATTGGGGCACAATCGATTGGTGAATGCCACCTTCGGAGTTTGTCCACA
GCTGCAGGAGTTGATTTTGAATGACAATCAACTGATACAGTTGGACGTGA
ATGCCTTTCGTGGACTCCATGGTCTGTTGGAGCTGCAGCTAAGCGGGAAT
AGATTGAGCTCCATTGGCCTGGAAACCTTTCAGCCGCTCGCCCAGCTGCG
AAAGTTGAACCTTTCCCAAAACGCCCTCGATGCACTGCGTCCAAATGTGT
TTGGAGCGGTTCAGAACTTTGTGTTGCATCTACAGCAGCTGGATTTGTCC
GGCAATCGCATCCGCCTGCTGTTC

BS15058.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG6749-PA 1659 CG6749-RA 1..858 17..874 4290 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:01:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG6749-RA 1834 CG6749-RA 6..863 17..874 4290 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:00:59
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9732938..9733346 640..232 2045 100 Minus
3L 28110227 3L 9732209..9732444 874..639 1180 100 Minus
3L 28110227 3L 9733585..9733802 234..17 1090 100 Minus
Blast to na_te.dros performed on 2015-02-11 23:01:03 has no hits.

BS15058.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:15:54 Download gff for BS15058.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6749-PA 1..858 17..874 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:48:58 Download gff for BS15058.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6749-PA 1..858 17..874 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:34:58 Download gff for BS15058.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6749-RA 1..863 13..874 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:32:42 Download gff for BS15058.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6749-RA 1..863 13..874 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:32:42 Download gff for BS15058.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 9732209..9732442 641..874 100 <- Minus
3L 9732938..9733344 234..640 100 <- Minus
3L 9733586..9733807 9..233 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:34:58 Download gff for BS15058.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9725309..9725542 641..874 100 <- Minus
arm_3L 9726038..9726444 234..640 100 <- Minus
arm_3L 9726686..9726907 9..233 98   Minus

BS15058.complete Sequence

1691 bp assembled on 2006-11-01

GenBank Submission: FJ637863

> BS15058.complete
GAAGTTATCAGTCGACATGTCGCAGACTGCCAACTGGGTTCTGCCGCTTT
TGCTGTGGCTTCTCTGCATGGGATTCCCCATTCTGCATGGCGCCGATCTC
TGCCAGCCCATCGGATGGCGGAACTTCCAGTGCAGCGAGGTCGCTTCTCT
GCAGGATCTGGTGGACTTGGGCGCCGAAAACTGGCACACGCTCGCCATAC
GGAATGTGCAAACGGAACTGGAGGTGGGATCAGGCGAAAATGCCGATCAC
TTGGCCAACTTGCTAGACTTGGATCTGACTGGCGCGGCTCCAATAAATGT
GCATACCAACGGATTTTCCATTCTGCCCAATCTGCGGCAACTGAATCTCA
GTGGCTGCGGTCTCGTTGACATCCGGGGAAATCACTTTGCGCCTGAGTCA
GCGCTCCAGCGGATCGATTTTAGTCACAATCAAATGGAGCTTCTGGATCG
CGACTTTTTTGGCAATCTAAGGAAATTGATCTATGCGAATTTTTCGCACA
ATGCTCTAAAGCAATGCGATCTGCCGCACATGCCACTGCTAAATCGACTG
GAATTGGGGCACAATCGATTGGTGAATGCCACCTTCGGAGTTTGTCCACA
GCTGCAGGAGTTGATTTTGAATGACAATCAACTGATACAGTTGGACGTGA
ATGCCTTTCGTGGACTCCATGGTCTGTTGGAGCTGCAGCTAAGCGGGAAT
AGATTGAGCTCCATTGGCCTGGAAACCTTTCAGCCGCTCGCCCAGCTGCG
AAAGTTGAACCTTTCCCAAAACGCCCTCGATGCACTGCGTCCAAATGTGT
TTGGAGCGGTTCAGAACTTTGTGTTGCATCTACAGCAGCTGGATTTGTCC
GGCAATCGCATCCGCCTGCTGTTCGACAACCAGTTCAGAGTGTTGGCCAG
ACTGCAGATGCTGGATGTGTCCAGGAACAGCATCGCCAGCCTCAGTCCTG
CTCACTTTGTGGGCTTGGGCTCACTACGGAAGCTGTATCTGCAGTACAAT
GCTATATTGGAAATCAAACCGGCCACCTTTGCCGCCCTGCTGAACCTGGA
CACCTTGGATCTGTCGTACAATAACTTGGAATTCCTGGAGGAACAGATCT
TCGGAGGCAACACCTTGCCGCGCATGCGAAGGCTCAACCTGAATGGCAAT
CGTATGAAGCATCTGCATCCACTGGCTTTCTCATCGTTACCATTTTTGGA
ATACCTAAAACTGGGTCACAACGAACTGAAATCCTTGGACGTGCGCATGT
TTGCACCAATGCGGCGTCTTCAGAAGCTCCACTTGGGTCACAATCTGCTG
GAGGAGATCAACCTCGATGTGCTGGAGAGCCTGAGTAGCGTACAGGAGAT
CCTAGTGGACAACAATCGCCTTACCTTTCTGGCCAAGGTGAATGTGAGCT
TCCCGAACCTTAAGCGCGTGGCCATCGAGGGTAATCCCTGGCAGTGTCCT
TGCTTCGTGAAGCTGCAACACTGGCTGGCCACCAGGGATGTGGTCTATCT
GCGCGATAACACGGGCTACTACAAGGGCGAACGACCCCTGTGCATAGTGA
CCAATGTGGACTACTGCATCCAGAATTTGCAGGCGGTACGACGCCTGGGA
ATTTTGGGCGATTTCCAGGGTGAACAGGTGGAGGCGGATGCTTTCGATGA
CGATGCCAGTGCAGCTCAAGACTGAAAGCTTTCTAGACCAT

BS15058.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:34:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG6749-RA 1659 CG6749-PA 1..1659 17..1675 8295 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:34:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG6749-RA 1834 CG6749-RA 6..1664 17..1675 8295 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:34:15
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9731408..9732444 1675..639 5185 100 Minus
3L 28110227 3L 9732938..9733346 640..232 2045 100 Minus
3L 28110227 3L 9733585..9733802 234..17 1090 100 Minus
Blast to na_te.dros performed on 2014-11-27 01:34:17 has no hits.

BS15058.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:33:43 Download gff for BS15058.complete
Subject Subject Range Query Range Percent Splice Strand
CG6749-RA 1..1659 17..1675 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:06:24 Download gff for BS15058.complete
Subject Subject Range Query Range Percent Splice Strand
CG6749-RA 1..1669 13..1680 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:57:10 Download gff for BS15058.complete
Subject Subject Range Query Range Percent Splice Strand
CG6749-RA 6..1663 17..1674 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:33:43 Download gff for BS15058.complete
Subject Subject Range Query Range Percent Splice Strand
CG6749-RA 1..1669 13..1680 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:28:05 Download gff for BS15058.complete
Subject Subject Range Query Range Percent Splice Strand
CG6749-RA 6..1663 17..1674 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:28:05 Download gff for BS15058.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9731409..9732442 641..1674 100 <- Minus
3L 9732938..9733344 234..640 100 <- Minus
3L 9733586..9733802 17..233 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:57:10 Download gff for BS15058.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9724509..9725542 641..1674 100 <- Minus
arm_3L 9726038..9726444 234..640 100 <- Minus
arm_3L 9726686..9726902 17..233 100   Minus

BS15058.pep Sequence

Translation from 16 to 1674

> BS15058.pep
MSQTANWVLPLLLWLLCMGFPILHGADLCQPIGWRNFQCSEVASLQDLVD
LGAENWHTLAIRNVQTELEVGSGENADHLANLLDLDLTGAAPINVHTNGF
SILPNLRQLNLSGCGLVDIRGNHFAPESALQRIDFSHNQMELLDRDFFGN
LRKLIYANFSHNALKQCDLPHMPLLNRLELGHNRLVNATFGVCPQLQELI
LNDNQLIQLDVNAFRGLHGLLELQLSGNRLSSIGLETFQPLAQLRKLNLS
QNALDALRPNVFGAVQNFVLHLQQLDLSGNRIRLLFDNQFRVLARLQMLD
VSRNSIASLSPAHFVGLGSLRKLYLQYNAILEIKPATFAALLNLDTLDLS
YNNLEFLEEQIFGGNTLPRMRRLNLNGNRMKHLHPLAFSSLPFLEYLKLG
HNELKSLDVRMFAPMRRLQKLHLGHNLLEEINLDVLESLSSVQEILVDNN
RLTFLAKVNVSFPNLKRVAIEGNPWQCPCFVKLQHWLATRDVVYLRDNTG
YYKGERPLCIVTNVDYCIQNLQAVRRLGILGDFQGEQVEADAFDDDASAA
QD*

BS15058.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:29:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG6749-PA 552 CG6749-PA 1..552 1..552 2867 100 Plus
CG32055-PA 534 CG32055-PA 4..532 9..534 754 34.5 Plus
lbk-PB 1252 CG8434-PB 281..681 95..490 363 29.7 Plus
conv-PA 1092 CG8561-PA 169..566 99..453 358 28.4 Plus
conv-PB 1092 CG8561-PB 169..566 99..453 358 28.4 Plus
conv-PA 1092 CG8561-PA 424..910 44..492 345 26.8 Plus
lbk-PB 1252 CG8434-PB 336..658 79..421 312 29.4 Plus
conv-PA 1092 CG8561-PA 194..643 100..457 287 26.3 Plus
conv-PA 1092 CG8561-PA 130..429 175..469 240 26.5 Plus
lbk-PB 1252 CG8434-PB 353..666 72..394 235 26.7 Plus
lbk-PB 1252 CG8434-PB 401..658 55..323 164 24.5 Plus