Clone Sequence Records
BS15064.complete Sequence
1358 bp assembled on 2009-12-07
GenBank Submission: KX801962
> BS15064.complete
GAAGTTATCAGTCGACATGTTGTCACAGAATTTACGCCTCGTCCGGGGAT
TGCTTAATTACGGAGTTTGCCGCCCGAGCTTGAGAAACTTCGCAGCCGTT
GGCGATAAAAACAACGCAGCCGATAATGCTAATGCCAGCGATGTGGACGA
ACGCCACCCGCTGCATGGTATCCGGATTTTGGACCTATCGCGCATCATCG
CCGGCCCCTATTGCACCATGGTTCTGGCGGATCTCGGCGCGGAAGTTATC
AAGGTGGAGCGTCCACACTTTGGCGATGAGGCGCGTAAGTGGGGACCACC
CTTTCTAAAGAACAGCAACGATGCCGCCTACTTCCTGGCTCCCAATCGCA
ATAAACGGAGCATCTGCATCGATATCAAGCGCGGCACGCAACTCCTTCAT
CGCCTGGCCGAGATTAGCGACGTGCTGGTGGAGAATTATGTGCCCGGCAC
CTTGGAGCGTTACGGCCTGGGCTACGAGCAGTTGCGTAAGGTGAATCCCA
AACTGATCTATTGCTCAATGACGGGTTATGGCTCTGTGGGACCGTATGCC
AAGCGACCCGGCTACGATGTGATTGCCTCCTCGGTTGGAGGACTGATGCA
CATCACCGGCGAGCGGGATGGACCGCCCAGCAAGGTGGGCGTGGCTGTGA
CGGATATGTCCACAGGACTGTACGCCCATGGAGCAATTTTGGCAGCCCTC
TATCAAAGGACCCGCACGCAACGTGGCCAGAAGATCGAAGTCGACCTGTT
GTCCACCTGCTGCTCCCTGCTGCTCAACGTGGGTAGCAACTACCTGAATT
CCGGGGTCGAAGCAGGAAGGATGGGCACCGCACACTCCAGCATCGTTCCG
TATCAGAGCTTCAAGACGAAGGACGGCTATCTCACCCTGGGCACTGGCAG
TGATGTTCAGTTTGTGGACCTGTGTCGCCGCCTAAAAGTGGAACATTTGG
CGCAGAATCCCAAATTCAAGACCAACAAGGATCGTGTGACCAATCGAGTG
GAGCTGCTGGGAATCCTAGAGCAAATGCTATCCGAGGACACCTCGCGCAA
CTGGATGAAACTTTTCGAGGGCGCCTCCTTTCCCGTGGGACCTGTTAACT
CCATTCCCGAGGTCTTCGAGGACGAGCATATAAAAGCCATTGGCCTGGTG
AAAAGCCTGCGGCATCCCAAGGACGAAACAGTCAAGGTGGTTGGTCCTCC
TGTGACCTTCAGCGAAGCGCGAAACGATGCCCGGACAGCTCCTCCGATTC
TTGGCCAGCACACGGATGAAGTGCTGGGCGAACTACTGGGTTACGGGCCG
GATGAGCTGGCCAAGCTGAAGAAGGATAACATTATTCAGTAAAAGCTTTC
TAGACCAT
BS15064.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:17:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10877-RA | 1326 | CG10877-PA | 1..1326 | 17..1342 | 6630 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:17:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10877-RA | 1582 | CG10877-RA | 98..1424 | 16..1342 | 6635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:17:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20562644..20563970 | 1342..16 | 6635 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:17:15 has no hits.
BS15064.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:49:22 Download gff for
BS15064.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-RA | 104..1422 | 22..1340 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:17:13 Download gff for
BS15064.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-RA | 104..1422 | 22..1340 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:08:19 Download gff for
BS15064.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-RA | 104..1422 | 22..1340 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:17:52 Download gff for
BS15064.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-RA | 104..1422 | 22..1340 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:17:52 Download gff for
BS15064.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20562646..20563964 | 22..1340 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:17:13 Download gff for
BS15064.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16388368..16389686 | 22..1340 | 100 | | Minus |
BS15064.3prime Sequence
735 bp (713 high quality bases) assembled on 2006-10-23
> BS15064.3prime
ATGGTCTAGAAAGCTTTTACTGAATAATGTTATCCTTCTTCAGCTTGGCC
AGCTCATCCGGCCCGTAACCCAGTAGTTCGCCCAGCACTTCATCCGTGTG
CTGGCCAAGAATCGGAGGAGCTGTCCGGGCATCGTTTCGCGCTTCGCTGA
AGGTCACAGGAGGACCAACCACCTTGACTGTTTCGTCCTTGGGATGCCGC
AGGCTTTTCACCAGGCCAATGGCTTTTATATGCTCGTCCTCGAAGACCTC
GGGAATGGAGTTAACAGGTCCCACGGGAAAGGAGGCGCCCTCGAAAAGTT
TCATCCAGTTGCGCGAGGTGTCCTCGGATAGCATTTGCTCTAGGATTCCC
AGCAGCTCCACTCGATTGGTCACACGATCCTTGTTGGTCTTGAATTTGGG
ATTCTGCGCCAAATGTTCCACTTTTAGGCGGCGACACAGGTCCACAAACT
GAACATCACTGCCAGTGCCCAGGGTGAGATAGCCGTCCTTCGTCTTGAAG
CTCTGATACGGAACGATGCTGGAGTGTGCGGTGCCCATCCTTCCTGCTTC
GACCCCGGAATTCAGGTAGTTGCTACCCACGTTGAGCAGCAGGGAGCAGC
AGGTGGACAACAGGTCGACTTCGATCTTCTGGCCACGTTGCGTGCGGGTC
CTTTGATAGAGGGCTGCCAAAATTGCTCCATGGGCGTACAGTCCTGTGGA
CATATCCGTCACAGCCACGCCCACCTTGCTGGGCG
BS15064.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10877-PA | 1326 | CG10877-RA | 608..1326 | 735..17 | 3595 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:00:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10877-RA | 1582 | CG10877-RA | 706..1424 | 735..17 | 3595 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:00:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20562644..20563362 | 17..735 | 3595 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 16:00:52 has no hits.
BS15064.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:06 Download gff for
BS15064.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-PA | 608..1326 | 17..735 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:49:13 Download gff for
BS15064.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-PA | 608..1326 | 17..735 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:23:55 Download gff for
BS15064.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-RA | 706..1424 | 17..735 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:34:49 Download gff for
BS15064.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-RA | 706..1424 | 17..735 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:34:49 Download gff for
BS15064.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20562644..20563362 | 17..735 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:23:55 Download gff for
BS15064.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16388366..16389084 | 17..735 | 100 | | Plus |
BS15064.5prime Sequence
774 bp (698 high quality bases) assembled on 2006-10-23
> BS15064.5prime
GAAGTTATCCCTCGACATGTTGTCACAGAATTTACGCCTCGTCCGGGGAT
TGCTTAATTACGGAGTTTGCCGCCCGAGCTTGAGAAACTTCGCAGCCGTT
GGCGATAAAAACAACGCAGCCGATAATGCTAATGCCAGCGATGTGGACGA
ACGCCACCCGCTGCATGGTATCCGGATTTTGGACCTATCGCGCATCATCG
CCGGCCCCTATTGCACCATGGTTCTGGCGGATCTCGGCGCGGAAGTTATC
AAGGTGGAGCGTCCACACTTTGGCGATGAGGCGCGTAAGTGGGGACCACC
CTTTCTAAAGAACAGCAACGATGCCGCCTACTTCCTGGCTCCCAATCGCA
ATAAACGGAGCATCTGCATCGATATCAAGCGCGGCACGCAACTCCTTCAT
CGCCTGGCCGAGATTAGCGACGTGCTGGTGGAGAATTATGTGCCCGGCAC
CTTGGAGCGTTACGGCCTGGGCTACGAGCAGTTGCGTAAGGTGAATCCCA
AACTGATCTATTGCTCAATGACGGGTTATGGCTCTGTGGGACCGTATGCC
AAGCGACCCGGCTACGATGTGATTGCCTCCTCGGTTGGAGGACTGATGCA
CATCACCGGCGAGCGGGATGGACCGCCCAGCAAGGTGGGCGTGGCTGTGA
CGGATATGTCCACAGGACTGTACGCCCATGGAGCAATTTTGGCAGCCCTC
TATCAAAGGACCCGCACGCAACGTGGCCAAAAGATCGAAGTCCACCTGTT
GTCCACCTGCTGCTCCCTGCTGCT
BS15064.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10877-PA | 1326 | CG10877-RA | 1..758 | 17..774 | 3740 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:54:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10877-RA | 1582 | CG10877-RA | 98..856 | 16..774 | 3765 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:54:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20563212..20563970 | 774..16 | 3765 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-12 23:54:48 has no hits.
BS15064.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:08 Download gff for
BS15064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-PA | 1..758 | 17..774 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:49:14 Download gff for
BS15064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-PA | 1..758 | 17..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:21:52 Download gff for
BS15064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-RA | 98..856 | 16..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:26:00 Download gff for
BS15064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-RA | 98..856 | 16..774 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:26:00 Download gff for
BS15064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20563212..20563970 | 16..774 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:21:52 Download gff for
BS15064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16388934..16389692 | 16..774 | 99 | | Minus |
BS15064.pep Sequence
Translation from 16 to 1341
> BS15064.pep
MLSQNLRLVRGLLNYGVCRPSLRNFAAVGDKNNAADNANASDVDERHPLH
GIRILDLSRIIAGPYCTMVLADLGAEVIKVERPHFGDEARKWGPPFLKNS
NDAAYFLAPNRNKRSICIDIKRGTQLLHRLAEISDVLVENYVPGTLERYG
LGYEQLRKVNPKLIYCSMTGYGSVGPYAKRPGYDVIASSVGGLMHITGER
DGPPSKVGVAVTDMSTGLYAHGAILAALYQRTRTQRGQKIEVDLLSTCCS
LLLNVGSNYLNSGVEAGRMGTAHSSIVPYQSFKTKDGYLTLGTGSDVQFV
DLCRRLKVEHLAQNPKFKTNKDRVTNRVELLGILEQMLSEDTSRNWMKLF
EGASFPVGPVNSIPEVFEDEHIKAIGLVKSLRHPKDETVKVVGPPVTFSE
ARNDARTAPPILGQHTDEVLGELLGYGPDELAKLKKDNIIQ*
BS15064.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:03:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10877-PA | 441 | CG10877-PA | 1..441 | 1..441 | 2294 | 100 | Plus |
| CG9319-PB | 373 | CG9319-PB | 2..305 | 48..371 | 297 | 27.8 | Plus |
| CG9319-PA | 373 | CG9319-PA | 2..305 | 48..371 | 297 | 27.8 | Plus |
