Clone BS15067 Report

Search the DGRC for BS15067

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:150
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG5347-RA
Protein status:BS15067.pep: full length peptide match
Sequenced Size:890

Clone Sequence Records

BS15067.complete Sequence

890 bp assembled on 2010-02-09

GenBank Submission: KX806471

> BS15067.complete
GAAGTTATCAGTCGACATGTCGTATCGCCGTAGTCAAACAATCTGTCGCT
TCCATTTGCTTGGAATTTGTCGTTTTGGTGATTTATGCCGATTCTCGCAC
GACGAGACGACACCAAATGACAACCAGAGTCCGCAGATATCGGAAATCGC
GGATGAAGTCGTGGAGAATGAGCAAGTGGTGGCCTCCACCAGTAGCTACA
GTCGCCAGATGACCTGGGCAAATGCACCAGAGTTTGTTCCCAGGTACAAA
GCCAATTCTGCCGATTTCCAAGCAACTGAAGGTGTCCAGGATATTTGTCC
ATATGGTGGCAGCTGTATCTGGGGCAGTAAGTGCTCGTATCCACTTCACA
TGGAGATTTGCAAGATGTGCGACCTTTACTGCCTCCACCCGATGGATCAG
AACCAACGCCGTGCGCACAATCGTGAGTGTCTGGAGCAGCACGAGCAGGC
GATGGAGCTATCTTTTGCAATAGCCAGATCCAAGGACAAGATGTGCGGCA
TTTGTTTCGATACCGTCGTGGAGAAGAAGGGACGTGAACGTCGCTTTGGC
ATCTTGTCCAAGTGCAAGCACATATTCTGTTTGACGTGCATTCGCACATG
GCGTCAGGCCCATCAATTTGAGGCCACTGTGACGCGTGGTTGCCCCGAAT
GTCGCGTCTTTTCGGAATTCGTGTGCCCTAGTGCCTACTGGGTGGATACA
AAGGAGGAGAAGGACAAGTTGCTAAGCGAATATCGCGCGGCAATGGGCGC
CAAGGATTGCAAGTACTTCAATGGGGGCTTGGGCAAATGTCCCTTTGGAA
ACAAGTGCTTCTACAGGCACCATCGTCGTTGTGACGATAACCAGACACAA
TCAAATGCCGTCAATTCAGACTGAAAGCTTTCTAGACCAT

BS15067.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:28:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG5347-RA 858 CG5347-PA 1..858 17..874 4290 100 Plus
CG5334-RA 633 CG5334-PA 200..568 447..815 1425 92.4 Plus
Mkrn1-RC 1161 CG7184-PC 491..966 345..820 745 77.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:28:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG5347-RA 1210 CG5347-RA 105..962 17..874 4290 100 Plus
CG5334-RA 992 CG5334-RA 251..619 447..815 1425 92.4 Plus
Mkrn1-RC 2229 CG7184-RC 696..1171 345..820 745 77.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:27:58
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14776878..14777735 17..874 4290 100 Plus
X 23542271 X 14775558..14775926 447..815 1425 92.4 Plus
3L 28110227 3L 21532353..21532630 622..345 460 77.7 Minus
3L 28110227 3L 21531848..21532028 820..640 320 78.5 Minus
3L 28110227 3L 18722609..18722851 715..473 270 74.1 Minus
Blast to na_te.dros performed on 2014-11-28 04:27:59 has no hits.

BS15067.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:27 Download gff for BS15067.complete
Subject Subject Range Query Range Percent Splice Strand
CG5347-RA 105..961 17..873 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:50 Download gff for BS15067.complete
Subject Subject Range Query Range Percent Splice Strand
CG5347-RA 105..961 17..873 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:02:50 Download gff for BS15067.complete
Subject Subject Range Query Range Percent Splice Strand
CG5347-RA 105..961 17..873 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:29:26 Download gff for BS15067.complete
Subject Subject Range Query Range Percent Splice Strand
CG5347-RA 105..961 17..873 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:29:26 Download gff for BS15067.complete
Subject Subject Range Query Range Percent Splice Strand
X 14776878..14777734 17..873 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:50 Download gff for BS15067.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 14670911..14671767 17..873 100   Plus

BS15067.3prime Sequence

860 bp (780 high quality bases) assembled on 2006-10-23

> BS15067.3prime
ATGGTCTAGAAAGCTTTCAGTCTGAATTGACGGCATTTGATTGTGTCTGG
TTATCGTCACAACGACGATGGTGCCTGTAGAAGCACTTGTTTCCAAAGGG
ACATTTGCCCAAGCCCCCATTGAAGTACTTGCAATCCTTGGCGCCCATTG
CCGCGCGATATTCGCTTAGCAACTTGTCCTTCTCCTCCTTTGTATCCACC
CAGTAGGCACTAGGGCACACGAATTCCGAAAAGACGCGACATTCGGGGCA
ACCACGCGTCACAGTGGCCTCAAATTGATGGGCCTGACGCCATGTGCGAA
TGCACGTCAAACAGAATATGTGCTTGCACTTGGACAAGATGCCAAAGCGA
CGTTCACGTCCCTTCTTCTCCACGACGGTATCGAAACAAATGCCGCACAT
CTTGTCCTTGGATCTGGCTATTGCAAAAGATAGCTCCATCGCCTGCTCGT
GCTGCTCCAGACACTCACGATTGTGCGCACGGCGTTGGTTCTGATCCATC
GGGTGGAGGCAGTAAAGGTCGCACATCTTGCAAATCTCCATGTGAAGTGG
ATACGAGCACTTACTGCCCCAGATACAGCTGCCACCATATGGACAAATAT
CCTGGACACCTTCAGTTGCTTGGAAATCGGCAGAATTGGCTTTGTACCTG
GGAACAAACTCTGGTGCATTTGCCCAGGTCATCTGGCGACTGTAGCTACT
GGTGGAGGCCACCACTTGCTCATTCTCCACGACTTCATCCGCGATTTCCG
ATATCTGCGGACTCTGGTTGTCATTTGGTGTCGTCTCGTCGTGCGAGAAT
CGGCATAAATCACCAAAACGACAAATTCCAAGCAAATGGAAGCGACAGAT
TGTTTGACTA

BS15067.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG5347-PA 858 CG5347-RA 15..858 860..17 4220 100 Minus
CG5334-PA 633 CG5334-RA 381..553 263..91 815 98.8 Minus
CG5334-PA 633 CG5334-RA 209..363 435..281 450 91.6 Minus
CG7184-PA 1161 Mkrn1-RA 709..756 328..281 140 91.6 Minus
CG7184-PB 1161 Mkrn1-RB 709..756 328..281 140 91.6 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:17:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG5347-RA 1210 CG5347-RA 119..962 860..17 4220 100 Minus
CG5334-RA 992 CG5334-RA 251..619 444..76 1425 92.4 Minus
Mkrn1-RC 2229 CG7184-RC 696..1171 546..71 745 77.4 Minus
CG5334-RA 992 CG5334-RA 81..202 851..727 245 82.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 21:17:23
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14776892..14777735 860..17 4220 100 Minus
X 23542271 X 14775558..14775926 444..76 1425 92.4 Minus
3L 28110227 3L 21532353..21532630 269..546 460 77.7 Plus
3L 28110227 3L 21531848..21532028 71..251 320 78.5 Plus
3L 28110227 3L 18722609..18722851 176..418 270 74.1 Plus
Blast to na_te.dros performed on 2015-02-04 21:17:25 has no hits.

BS15067.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:11 Download gff for BS15067.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5347-PA 16..858 17..859 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:49:19 Download gff for BS15067.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5347-PA 16..858 17..859 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:41:31 Download gff for BS15067.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5347-RA 120..967 12..859 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-05 00:45:13 Download gff for BS15067.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5347-RA 120..967 12..859 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-05 00:45:13 Download gff for BS15067.3prime
Subject Subject Range Query Range Percent Splice Strand
X 14776893..14777740 12..859 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:41:31 Download gff for BS15067.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 14670926..14671773 12..859 99   Minus

BS15067.5prime Sequence

883 bp (753 high quality bases) assembled on 2006-10-23

> BS15067.5prime
GAAGTTATCCTTCGACATGTCGTATCGCCGTAGTCAAACAATCTGTCGCT
TCCATTTGCTTGGAATTTGTCGTTTTGGTGATTTATGCCGATTCTCGCAC
GACGAGACGACACCAAATGACAACCAGAGTCCGCAGATATCGGAAATCGC
GGATGAAGTCGTGGAGAATGAGCAAGTGGTGGCCTCCACCAGTAGCTACA
GTCGCCAGATGACCTGGGCAAATGCACCAGAGTTTGTTCCCAGGTACAAA
GCCAATTCTGCCGATTTCCAAGCAACTGAAGGTGTCCAGGATATTTGTCC
ATATGGTGGCAGCTGTATCTGGGGCAGTAAGTGCTCGTATCCACTTCACA
TGGAGATTTGCAAGATGTGCGACCTTTACTGCCTCCACCCGATGGATCAG
AACCAACGCCGTGCGCACAATCGTGAGTGTCTGGAGCAGCACGAGCAGGC
GATGGAGCTATCTTTTGCAATAGCCAGATCCAAGGACAAGATGTGCGGCA
TTTGTTTCGATACCGTCGTGGAGAAGAAGGGACGTGAACGTCGCTTTGGC
ATCTTGTCCAAGTGCAAGCACATATTCTGTTTGACGTGCATTCGCACATG
GCGTCAGGCCCATCAATTTGAGGCCACTGTGACGCGTGGTTGCCCCGAAT
GTCGCGTCTTTTCGGAATTCGTGTGCCCTAGTGCCTACTGGGTGGATACA
AAGGAGGAGAAGGACAAGTTGCTAAGCGAATATCGCGCGGCAATGGGCGC
CAAGGATTGCAAGTACTTCAATGGGGGCTTGGGCAAATGTCCCTTTGGAA
ACAAGTGCTTCTACAGGCACCATCGTCGTTGTGACGATAACCAGACACAA
TCAAATGCCGTCAATTCAGACTGAAAGTTTTCT

BS15067.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG5347-PA 858 CG5347-RA 1..858 17..874 4290 100 Plus
CG5334-PA 633 CG5334-RA 381..553 628..800 815 98.8 Plus
CG5334-PA 633 CG5334-RA 209..363 456..610 450 91.6 Plus
CG7184-PA 1161 Mkrn1-RA 709..756 563..610 140 91.6 Plus
CG7184-PB 1161 Mkrn1-RB 709..756 563..610 140 91.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:52:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG5347-RA 1210 CG5347-RA 105..962 17..874 4290 100 Plus
CG5334-RA 992 CG5334-RA 251..619 447..815 1425 92.4 Plus
Mkrn1-RC 2229 CG7184-RC 696..1171 345..820 745 77.4 Plus
CG5334-RA 992 CG5334-RA 81..202 40..164 245 82.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:52:15
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14776878..14777735 17..874 4290 100 Plus
X 23542271 X 14775558..14775926 447..815 1425 92.4 Plus
3L 28110227 3L 21532353..21532630 622..345 460 77.7 Minus
3L 28110227 3L 21531848..21532028 820..640 320 78.5 Minus
3L 28110227 3L 18722609..18722851 715..473 270 74.1 Minus
Blast to na_te.dros performed on 2015-02-12 05:52:18 has no hits.

BS15067.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:12 Download gff for BS15067.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5347-PA 1..858 17..874 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:49:20 Download gff for BS15067.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5347-PA 1..858 17..874 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 06:29:36 Download gff for BS15067.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5347-RA 105..962 17..874 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:02:39 Download gff for BS15067.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5347-RA 105..962 17..874 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:02:39 Download gff for BS15067.5prime
Subject Subject Range Query Range Percent Splice Strand
X 14776878..14777735 17..874 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 06:29:36 Download gff for BS15067.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 14670911..14671768 17..874 100   Plus

BS15067.pep Sequence

Translation from 16 to 873

> BS15067.pep
MSYRRSQTICRFHLLGICRFGDLCRFSHDETTPNDNQSPQISEIADEVVE
NEQVVASTSSYSRQMTWANAPEFVPRYKANSADFQATEGVQDICPYGGSC
IWGSKCSYPLHMEICKMCDLYCLHPMDQNQRRAHNRECLEQHEQAMELSF
AIARSKDKMCGICFDTVVEKKGRERRFGILSKCKHIFCLTCIRTWRQAHQ
FEATVTRGCPECRVFSEFVCPSAYWVDTKEEKDKLLSEYRAAMGAKDCKY
FNGGLGKCPFGNKCFYRHHRRCDDNQTQSNAVNSD*

BS15067.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:11:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG5347-PA 285 CG5347-PA 1..285 1..285 1588 100 Plus
Mkrn1-PC 386 CG7184-PC 14..322 1..268 901 56.6 Plus
Mkrn1-PB 386 CG7184-PB 14..322 1..268 901 56.6 Plus
Mkrn1-PA 386 CG7184-PA 14..322 1..268 901 56.6 Plus
CG5334-PA 210 CG5334-PA 67..208 144..285 611 76.1 Plus