Clone BS15068 Report

Search the DGRC for BS15068

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:150
Well:68
Vector:pDNR-Dual
Associated Gene/TranscriptCG9822-RA
Protein status:BS15068.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15068.3prime Sequence

817 bp (815 high quality bases) assembled on 2006-10-23

> BS15068.3prime
ATGGTCTAGAAAGCTTCTAGTAGAAATTGTGGTTTGGATTGTATTGTTCC
TTGATGGAACAGAGTGCGGGATACTCTGGATTACTTCCCGTCCGGCATTC
AGAGGCGGGCTTTCCGGCATTGTAAACAGGAACTCCGATGGCATAGACAC
TGGCATAGTTGCAGGCAGTATTGTAGATGTAGAGGAAGGGGTACTGCGGA
TTGGTGAAGCGCATCATGGCACAGCCCACATGGGTGTTCCTGTCCAGCAC
GGTTTCCACAAAGTGTCCATACTTTTCGAGGTCTTTGGTCAGCTTAAAAT
CGGTAATGTAACTGCTGTCGATGAGTTTGTGCTCTCCAAACCACAAGCCC
ATCGACTGCTCCACCAGATTGGTCACGTTCAAGTCCCAGTTCCTCCGACG
ATCGACACCGCAGAGATTCTGACCCAGATTCCGGAAGCGGTAGCTGTTGT
GGCAGTCGTCGTGCTCCAGGTAACAGGTTTTCAGGTTCAACGTGGCCAGG
TACTCCAGCTCCTCATCCCACACCATGGTGGCCATGCGGGTGGCCGGATA
GTAGCCGGGCAAAGATCCAGAGGCAATGTAGTTCCTGCGCTTGTTGTGCT
CATTCACGATAAGTTTGCGATAAGGCTTCAGGTCCACCATAGTGGCATCC
GGGGAGCAGCTTTCATGGAATTTACCATCGTTATTACACGCTATGTGCAC
CGTGTTGTCAGGACATAAGTCCGGATCACACCAGGACAGGGGCTGAGAAC
TGGCCATACCCAGGATGATCAACAGACAACCGACCGTTTGAAATCTACCG
TACTCCATGTCGACTGA

BS15068.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG9822-PA 792 CG9822-RA 1..792 808..17 3960 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:16:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG9822-RA 883 CG9822-RA 36..829 810..17 3970 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:16:08
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21347260..21347654 279..673 1975 100 Plus
2R 25286936 2R 21346929..21347190 17..278 1310 100 Plus
2R 25286936 2R 21347712..21347848 674..810 685 100 Plus
Blast to na_te.dros performed on 2015-02-13 06:16:09 has no hits.

BS15068.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:13 Download gff for BS15068.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9822-PA 1..792 17..808 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:49:22 Download gff for BS15068.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9822-PA 1..792 17..808 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:53:18 Download gff for BS15068.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9822-RA 30..831 12..816 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:20:45 Download gff for BS15068.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9822-RA 30..831 12..816 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:20:45 Download gff for BS15068.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 21346927..21347190 12..278 98 <- Plus
2R 21347260..21347654 279..673 100 <- Plus
2R 21347712..21347854 674..816 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:53:18 Download gff for BS15068.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17234432..17234695 12..278 98 <- Plus
arm_2R 17234765..17235159 279..673 100 <- Plus
arm_2R 17235217..17235359 674..816 98   Plus

BS15068.5prime Sequence

822 bp (805 high quality bases) assembled on 2006-10-23

> BS15068.5prime
GAAGTTATCCTTCGACATGGAGTACGGTAGATTTCAAACGGTCGGTTGTC
TGTTGATCATCCTGGGTATGGCCAGTTCTCAGCCCCTGTCCTGGTGTGAT
CCGGACTTATGTCCTGACAACACGGTGCACATAGCGTGTAATAACGATGG
TAAATTCCATGAAAGCTGCTCCCCGGATGCCACTATGGTGGACCTGAAGC
CTTATCGCAAACTTATCGTGAATGAGCACAACAAGCGCAGGAACTACATT
GCCTCTGGATCTTTGCCCGGCTACTATCCGGCCACCCGCATGGCCACCAT
GGTGTGGGATGAGGAGCTGGAGTACCTGGCCACGTTGAACCTGAAAACCT
GTTACCTGGAGCACGACGACTGCCACAACAGCTACCGCTTCCGGAATCTG
GGTCAGAATCTCTGCGGTGTCGATCGTCGGAGGAACTGGGACTTGAACGT
GACCAATCTGGTGGAGCAGTCGATGGGCTTGTGGTTTGGAGAGCACAAAC
TCATCGACAGCAGTTACATTACCGATTTTAAGCTGACCAAAGACCTCGAA
AAGTATGGACACTTTGTGGAAACCGTGCTGGACAGGAACACCCATGTGGG
CTGTGCCATGATGCGCTTCACCAATCCGCAGTACCCCTTCCTCTACATCT
ACAATACTGCCTGCAACTATGCCAGTGTCTATGCCATCGGAGTTCCTGTT
TACAATGCCGGAAAGCCCGCCTCTGAATGCCGGACGGGAAGTAATCCAGA
GTATCCCGCACTCTGTTCCATCAAGGAACAATACAATCCAAACCACAATT
TCTACTAGAAGCTTTCTAGACC

BS15068.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG9822-PA 792 CG9822-RA 1..792 17..808 3960 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:05:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG9822-RA 883 CG9822-RA 36..829 15..808 3970 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:05:11
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21347260..21347654 546..152 1975 100 Minus
2R 25286936 2R 21346929..21347190 808..547 1310 100 Minus
2R 25286936 2R 21347712..21347848 151..15 685 100 Minus
Blast to na_te.dros performed on 2015-02-13 07:05:12 has no hits.

BS15068.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:14 Download gff for BS15068.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9822-PA 1..792 17..808 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:49:24 Download gff for BS15068.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9822-PA 1..792 17..808 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 20:49:47 Download gff for BS15068.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9822-RA 27..831 7..813 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:20:24 Download gff for BS15068.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9822-RA 27..831 7..813 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:20:24 Download gff for BS15068.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21347260..21347654 152..546 100 <- Minus
2R 21346927..21347190 547..813 98 <- Minus
2R 21347712..21347857 7..151 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 20:49:47 Download gff for BS15068.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17234432..17234695 547..813 98 <- Minus
arm_2R 17234765..17235159 152..546 100 <- Minus
arm_2R 17235217..17235362 7..151 97   Minus

BS15068.complete Sequence

824 bp assembled on 2006-11-01

GenBank Submission: FJ637866

> BS15068.complete
GAAGTTATCAGTCGACATGGAGTACGGTAGATTTCAAACGGTCGGTTGTC
TGTTGATCATCCTGGGTATGGCCAGTTCTCAGCCCCTGTCCTGGTGTGAT
CCGGACTTATGTCCTGACAACACGGTGCACATAGCGTGTAATAACGATGG
TAAATTCCATGAAAGCTGCTCCCCGGATGCCACTATGGTGGACCTGAAGC
CTTATCGCAAACTTATCGTGAATGAGCACAACAAGCGCAGGAACTACATT
GCCTCTGGATCTTTGCCCGGCTACTATCCGGCCACCCGCATGGCCACCAT
GGTGTGGGATGAGGAGCTGGAGTACCTGGCCACGTTGAACCTGAAAACCT
GTTACCTGGAGCACGACGACTGCCACAACAGCTACCGCTTCCGGAATCTG
GGTCAGAATCTCTGCGGTGTCGATCGTCGGAGGAACTGGGACTTGAACGT
GACCAATCTGGTGGAGCAGTCGATGGGCTTGTGGTTTGGAGAGCACAAAC
TCATCGACAGCAGTTACATTACCGATTTTAAGCTGACCAAAGACCTCGAA
AAGTATGGACACTTTGTGGAAACCGTGCTGGACAGGAACACCCATGTGGG
CTGTGCCATGATGCGCTTCACCAATCCGCAGTACCCCTTCCTCTACATCT
ACAATACTGCCTGCAACTATGCCAGTGTCTATGCCATCGGAGTTCCTGTT
TACAATGCCGGAAAGCCCGCCTCTGAATGCCGGACGGGAAGTAATCCAGA
GTATCCCGCACTCTGTTCCATCAAGGAACAATACAATCCAAACCACAATT
TCTACTAGAAGCTTTCTAGACCAT

BS15068.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:16:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG9822-RA 792 CG9822-PA 1..792 17..808 3960 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:16:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG9822-RA 883 CG9822-RA 36..829 15..808 3970 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:16:55
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21347260..21347654 546..152 1975 100 Minus
2R 25286936 2R 21346929..21347190 808..547 1310 100 Minus
2R 25286936 2R 21347712..21347848 151..15 685 100 Minus
Blast to na_te.dros performed on 2014-11-28 01:16:56 has no hits.

BS15068.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:33:47 Download gff for BS15068.complete
Subject Subject Range Query Range Percent Splice Strand
CG9822-RA 1..792 17..808 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:06:29 Download gff for BS15068.complete
Subject Subject Range Query Range Percent Splice Strand
CG9822-RA 2..799 14..813 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:44:56 Download gff for BS15068.complete
Subject Subject Range Query Range Percent Splice Strand
CG9822-RA 38..829 17..808 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:33:47 Download gff for BS15068.complete
Subject Subject Range Query Range Percent Splice Strand
CG9822-RA 2..797 14..808 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:49:46 Download gff for BS15068.complete
Subject Subject Range Query Range Percent Splice Strand
CG9822-RA 38..829 17..808 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:49:46 Download gff for BS15068.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21346929..21347190 547..808 100 <- Minus
2R 21347260..21347654 152..546 100 <- Minus
2R 21347712..21347846 17..151 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:44:56 Download gff for BS15068.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17234434..17234695 547..808 100 <- Minus
arm_2R 17234765..17235159 152..546 100 <- Minus
arm_2R 17235217..17235351 17..151 100   Minus

BS15068.pep Sequence

Translation from 16 to 807

> BS15068.pep
MEYGRFQTVGCLLIILGMASSQPLSWCDPDLCPDNTVHIACNNDGKFHES
CSPDATMVDLKPYRKLIVNEHNKRRNYIASGSLPGYYPATRMATMVWDEE
LEYLATLNLKTCYLEHDDCHNSYRFRNLGQNLCGVDRRRNWDLNVTNLVE
QSMGLWFGEHKLIDSSYITDFKLTKDLEKYGHFVETVLDRNTHVGCAMMR
FTNPQYPFLYIYNTACNYASVYAIGVPVYNAGKPASECRTGSNPEYPALC
SIKEQYNPNHNFY*

BS15068.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:29:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG9822-PA 263 CG9822-PA 1..263 1..263 1464 100 Plus
CG17974-PA 259 CG17974-PA 13..258 14..259 799 56.1 Plus
CG32679-PA 254 CG32679-PA 14..250 12..259 436 40.6 Plus
CG6628-PA 277 CG6628-PA 24..260 19..256 435 41.1 Plus
Ag5r-PC 256 CG9538-PC 4..256 6..263 419 36.9 Plus