Clone Sequence Records
BS15069.3prime Sequence
579 bp (579 high quality bases) assembled on 2006-10-23
> BS15069.3prime
ATGGTCTAGAAAGCTTTTAGTCCTTGATGATGATGGGCCTGGTGCGGCAG
CGTCGGATGCCACCGCCCACAACATTGCCCTGGCAGCTCCACTGGCTGGC
CCTCACCCACTGGTTAAGCGGATTCCGGACGCAGTTCCTCCTCTGGGCCT
CGCAGCGGGTCTGCAGGATGCAAGCGCCCTGCTGGTCCCTCCAGCAGCTG
GCCAGCTTGTCGTCAAGGCAGATCCTCCTCTGGCACTCCTTGATGCGCTT
GCCATCGGACTGGGGACGAGGACGCAGCCTGATGGCGCACTGGCCCACGC
CGCTGGTGCCGGGAATGTTGCGACAGCGGGTGATGCATGTCTCCCGAATG
GGTTCGAGTCCATTGTCCCGACGGCGGCAATTCTTCTCCCGCAGACGACA
GGCCGGCAGGCGGGTGCACACATTGGTCACCTTGTTGCGGATGCACACAC
TCTGGCCGCTGGACAGACCGGTGCAGCGACCCACACACGGACGCCGATCG
CCATCAGCCTGGATGGCCACGATGGCCAGGACGACGAGGAGAAGGCAAAT
GGTGAACTTGCTCATGTCGACTGATAACT
BS15069.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4151-PA | 549 | CG4151-RA | 1..549 | 565..17 | 2745 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:15:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4151-RB | 1307 | CG4151-RB | 398..947 | 566..17 | 2750 | 100 | Minus |
| CG4151-RA | 758 | CG4151-RA | 61..610 | 566..17 | 2750 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:15:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5501873..5502422 | 566..17 | 2750 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 17:15:15 has no hits.
BS15069.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:15 Download gff for
BS15069.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-PA | 1..549 | 17..565 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:49:25 Download gff for
BS15069.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-PA | 1..549 | 17..565 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:53:39 Download gff for
BS15069.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-RA | 42..598 | 8..566 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:12:46 Download gff for
BS15069.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-RA | 61..617 | 8..566 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:12:46 Download gff for
BS15069.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5501873..5502429 | 8..566 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:53:39 Download gff for
BS15069.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5395906..5396462 | 8..566 | 99 | | Minus |
BS15069.5prime Sequence
579 bp (579 high quality bases) assembled on 2006-10-23
> BS15069.5prime
GAAGTTATCCTTCGACATGAGCAAGTTCACCATTTGCCTTCTCCTCGTCG
TCCTGGCCATCGTGGCCATCCAGGCTGATGGCGATCGGCGTCCGTGTGTG
GGTCGCTGCACCGGTCTGTCCAGCGGCCAGAGTGTGTGCATCCGCAACAA
GGTGACCAATGTGTGCACCCGCCTGCCGGCCTGTCGTCTGCGGGAGAAGA
ATTGCCGCCGTCGGGACAATGGACTCGAACCCATTCGGGAGACATGCATC
ACCCGCTGTCGCAACATTCCCGGCACCAGCGGCGTGGGCCAGTGCGCCAT
CAGGCTGCGTCCTCGTCCCCAGTCCGATGGCAAGCGCATCAAGGAGTGCC
AGAGGAGGATCTGCCTTGACGACAAGCTGGCCAGCTGCTGGAGGGACCAG
CAGGGCGCTTGCATCCTGCAGACCCGCTGCGAGGCCCAGAGGAGGAACTG
CGTCCGGAATCCGCTTAACCAGTGGGTGAGGGCCAGCCAGTGGAGCTGCC
AGGGCAATGTTGTGGGCGGTGGCATCCGACGCTGCCGCACCAGGCCCATC
ATCATCAAGGACTAAAAGCTTTCTAGACC
BS15069.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4151-PA | 549 | CG4151-RA | 1..549 | 17..565 | 2745 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:14:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4151-RB | 1307 | CG4151-RB | 398..947 | 16..565 | 2750 | 100 | Plus |
| CG4151-RA | 758 | CG4151-RA | 61..610 | 16..565 | 2750 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:14:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5501873..5502422 | 16..565 | 2750 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 06:14:27 has no hits.
BS15069.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:16 Download gff for
BS15069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-PA | 1..549 | 17..565 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:49:27 Download gff for
BS15069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-PA | 1..549 | 17..565 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:53:04 Download gff for
BS15069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-RA | 42..598 | 16..574 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:19:01 Download gff for
BS15069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-RA | 61..617 | 16..574 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:19:01 Download gff for
BS15069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5501873..5502429 | 16..574 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:53:04 Download gff for
BS15069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5395906..5396462 | 16..574 | 99 | | Plus |
BS15069.complete Sequence
581 bp assembled on 2006-11-01
GenBank Submission: FJ637867
> BS15069.complete
GAAGTTATCAGTCGACATGAGCAAGTTCACCATTTGCCTTCTCCTCGTCG
TCCTGGCCATCGTGGCCATCCAGGCTGATGGCGATCGGCGTCCGTGTGTG
GGTCGCTGCACCGGTCTGTCCAGCGGCCAGAGTGTGTGCATCCGCAACAA
GGTGACCAATGTGTGCACCCGCCTGCCGGCCTGTCGTCTGCGGGAGAAGA
ATTGCCGCCGTCGGGACAATGGACTCGAACCCATTCGGGAGACATGCATC
ACCCGCTGTCGCAACATTCCCGGCACCAGCGGCGTGGGCCAGTGCGCCAT
CAGGCTGCGTCCTCGTCCCCAGTCCGATGGCAAGCGCATCAAGGAGTGCC
AGAGGAGGATCTGCCTTGACGACAAGCTGGCCAGCTGCTGGAGGGACCAG
CAGGGCGCTTGCATCCTGCAGACCCGCTGCGAGGCCCAGAGGAGGAACTG
CGTCCGGAATCCGCTTAACCAGTGGGTGAGGGCCAGCCAGTGGAGCTGCC
AGGGCAATGTTGTGGGCGGTGGCATCCGACGCTGCCGCACCAGGCCCATC
ATCATCAAGGACTAAAAGCTTTCTAGACCAT
BS15069.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:40:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4151-RB | 549 | CG4151-PB | 1..549 | 17..565 | 2745 | 100 | Plus |
| CG4151-RA | 549 | CG4151-PA | 1..549 | 17..565 | 2745 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:40:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4151-RB | 1307 | CG4151-RB | 398..947 | 16..565 | 2750 | 100 | Plus |
| CG4151-RA | 758 | CG4151-RA | 61..610 | 16..565 | 2750 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:40:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5501873..5502422 | 16..565 | 2750 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:40:40 has no hits.
BS15069.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:46:37 Download gff for
BS15069.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-RA | 1..549 | 17..565 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:34:22 Download gff for
BS15069.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-RA | 42..598 | 16..574 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:20:14 Download gff for
BS15069.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-RA | 43..589 | 17..563 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:46:38 Download gff for
BS15069.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-RA | 42..598 | 16..574 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:15:02 Download gff for
BS15069.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-RA | 62..608 | 17..563 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:15:02 Download gff for
BS15069.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5501874..5502420 | 17..563 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:20:14 Download gff for
BS15069.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5395907..5396453 | 17..563 | 100 | | Plus |
BS15069.pep Sequence
Translation from 16 to 564
> BS15069.pep
MSKFTICLLLVVLAIVAIQADGDRRPCVGRCTGLSSGQSVCIRNKVTNVC
TRLPACRLREKNCRRRDNGLEPIRETCITRCRNIPGTSGVGQCAIRLRPR
PQSDGKRIKECQRRICLDDKLASCWRDQQGACILQTRCEAQRRNCVRNPL
NQWVRASQWSCQGNVVGGGIRRCRTRPIIIKD*
BS15069.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:48:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4151-PB | 182 | CG4151-PB | 1..182 | 1..182 | 990 | 100 | Plus |
| CG4151-PA | 182 | CG4151-PA | 1..182 | 1..182 | 990 | 100 | Plus |
