Clone Sequence Records
BS15070.3prime Sequence
822 bp (722 high quality bases) assembled on 2006-10-23
> BS15070.3prime
ATGGTCTAGAAAGCTTTCAACATACTAAGCATGTTTGAGTAAACTCCACG
ACTAGTTCAACAAATTGTTCCGGCTGATCCTCATACACACAGTGTCCAGC
ATCCAGAATCTGTACCACTGTATTTGGAAAGTATCTCTGCATCACGGCAA
TACTGGTCGTGGTCACGAATTCCGACTGGGAACCGGCTATGAGCAAGACT
TCGCCCATGTAGGGACGCAGTCCGCCCAAAGTGGCCTCGTAATTGATCAT
CATCTCCCCCCAGGAGCTTAGGACCGCCTGGGGATTAACTGCCCAGCCAA
AGGTGTTGTCCTGCATCTTGCGCAGATTGTAAATAATGCGACGCAGCTCG
GAGGCGTCGTGGACCACATCCTGGAACAGTGGCAGGATGAACGTACGCCC
CTCGGAAAGTGATAGATTTGAGGGAATACTGGGCGCCACCTGGAGCATCA
TCTCGAACACCTGCCGAGTGAGATAGAAGTTACTGGGCACCGGTGCTGGT
GTGATGTCCACCAGTATGACCCGCTCGACGAGTTGCGGCTGAGTGAGTGC
CAGTGTCATCATTGCCCGACCGCCCATTCCATGTCCAAGTGCAACGATCT
TGTTCAGTCTCTGGTGGCTCATCAGGGCCTCCACGTCGGCGGCCAGGTGC
ATTGGCGAATGCCCGGTTATGTAAGGACTAAGGCCATGATTCCGAGCATC
CACGGTGATCACCTGGCGCAATCCAACCTGACTGAGGTTAACAGCTACCT
GGCGCCAGGATTCCAGTGACAGATTGAGGTCGTGCATCACCACAATTGGT
GGCGCCTGCATCTGATTGCGCG
BS15070.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14717-PA | 921 | CG14717-RA | 116..921 | 822..17 | 4030 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:24:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14717-RB | 1819 | CG14717-RB | 253..1059 | 822..16 | 4035 | 100 | Minus |
CG14717-RA | 1154 | CG14717-RA | 253..1059 | 822..16 | 4035 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:24:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11696761..11697567 | 822..16 | 4035 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 16:24:03 has no hits.
BS15070.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:17 Download gff for
BS15070.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14717-PA | 116..921 | 17..822 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:49:28 Download gff for
BS15070.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14717-PA | 116..921 | 17..822 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 02:39:37 Download gff for
BS15070.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14717-RA | 253..1059 | 16..822 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:31:36 Download gff for
BS15070.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14717-RA | 253..1059 | 16..822 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:31:36 Download gff for
BS15070.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11696761..11697567 | 16..822 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 02:39:37 Download gff for
BS15070.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7522483..7523289 | 16..822 | 100 | | Minus |
BS15070.5prime Sequence
863 bp (767 high quality bases) assembled on 2006-10-23
> BS15070.5prime
GAAGTTATCCGTCGACATGGCAAGACAGCGACTTCTCGGCTCGATCCTTT
CCAAAGGCGGAGCCCAAGTGCTGCGAAACTTCCAGTCATTTGTCCAGGGC
ACTCGTTTGGAGTATGTCTCCTACACCTCGCCGCGCAATCAGATGCAGGC
GCCACCAATTGTGGTGATGCACGACCTCAATCTGTCACTGGAATCCTGGC
GCCAGGTAGCTGTTAACCTCAGTCAGGTTGGATTGCGCCAGGTGATCACC
GTGGATGCTCGGAATCATGGCCTTAGTCCTTACATAACCGGGCATTCGCC
AATGCACCTGGCCGCCGACGTGGAGGCCCTGATGAGCCACCAGAGACTGA
ACAAGATCGTTGCACTTGGACATGGAATGGGCGGTCGGGCAATGATGACA
CTGGCACTCACTCAGCCGCAACTCGTCGAGCGGGTCATACTGGTGGACAT
CACACCAGCACCGGTGCCCAGTAACTTCTATCTCACTCGGCAGGTGTTCG
AGATGATGCTCCAGGTGGCGCCCAGTATTCCCTCAAATCTATCACTTTCC
GAGGGGCGTACGTTCATCCTGCCACTGTTCCAGGATGTGGTCCACGACGC
CTCCGAGCTGCGTCGCATTATTTACAATCTGCGCAAGATGCAGGACAACA
CCTTTGGCTGGGCAGTTAATCCCCAGGCGGTCCTAAGCTCCTGGGGGGAG
ATGATGATCAATTACGAGGCCACTTTGGGCGGACTGCGTCCCTACATGGG
CGAAGTCTTGCTCATAGCCGGTTCCCAGTCGGAATTCGTGACCACGACCA
GTATTGCCGTGATGCAGAGATACTTTCCAAATACAGTGGTACAGATTCTG
GATGCTGGACACT
BS15070.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14717-PA | 921 | CG14717-RA | 1..847 | 17..863 | 4235 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:15:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14717-RB | 1819 | CG14717-RB | 137..984 | 16..863 | 4240 | 100 | Plus |
CG14717-RA | 1154 | CG14717-RA | 137..984 | 16..863 | 4240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:15:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11696645..11697492 | 16..863 | 4240 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 06:15:46 has no hits.
BS15070.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:18 Download gff for
BS15070.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14717-PA | 1..847 | 17..863 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:49:30 Download gff for
BS15070.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14717-PA | 1..847 | 17..863 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:53:13 Download gff for
BS15070.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14717-RA | 137..984 | 16..863 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:20:00 Download gff for
BS15070.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14717-RA | 137..984 | 16..863 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:20:00 Download gff for
BS15070.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11696645..11697492 | 16..863 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:53:13 Download gff for
BS15070.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7522367..7523214 | 16..863 | 100 | | Plus |
BS15070.complete Sequence
953 bp assembled on 2010-02-09
GenBank Submission: KX805822
> BS15070.complete
GAAGTTATCAGTCGACATGGCAAGACAGCGACTTCTCGGCTCGATCCTTT
CCAAAGGCGGAGCCCAAGTGCTGCGAAACTTCCAGTCATTTGTCCAGGGC
ACTCGTTTGGAGTATGTCTCCTACACCTCGCCGCGCAATCAGATGCAGGC
GCCACCAATTGTGGTGATGCACGACCTCAATCTGTCACTGGAATCCTGGC
GCCAGGTAGCTGTTAACCTCAGTCAGGTTGGATTGCGCCAGGTGATCACC
GTGGATGCTCGGAATCATGGCCTTAGTCCTTACATAACCGGGCATTCGCC
AATGCACCTGGCCGCCGACGTGGAGGCCCTGATGAGCCACCAGAGACTGA
ACAAGATCGTTGCACTTGGACATGGAATGGGCGGTCGGGCAATGATGACA
CTGGCACTCACTCAGCCGCAACTCGTCGAGCGGGTCATACTGGTGGACAT
CACACCAGCACCGGTGCCCAGTAACTTCTATCTCACTCGGCAGGTGTTCG
AGATGATGCTCCAGGTGGCGCCCAGTATTCCCTCAAATCTATCACTTTCC
GAGGGGCGTACGTTCATCCTGCCACTGTTCCAGGATGTGGTCCACGACGC
CTCCGAGCTGCGTCGCATTATTTACAATCTGCGCAAGATGCAGGACAACA
CCTTTGGCTGGGCAGTTAATCCCCAGGCGGTCCTAAGCTCCTGGGGGGAG
ATGATGATCAATTACGAGGCCACTTTGGGCGGACTGCGTCCCTACATGGG
CGAAGTCTTGCTCATAGCCGGTTCCCAGTCGGAATTCGTGACCACGACCA
GTATTGCCGTGATGCAGAGATACTTTCCAAATACAGTGGTACAGATTCTG
GATGCTGGACACTGTGTGTATGAGGATCAGCCGGAACAATTTGTTGAACT
AGTCGTGGAGTTTACTCAAACATGCTTAGTATGTTGAAAGCTTTCTAGAC
CAT
BS15070.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:10:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14717-RB | 921 | CG14717-PB | 1..921 | 17..937 | 4605 | 100 | Plus |
CG14717-RA | 921 | CG14717-PA | 1..921 | 17..937 | 4605 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:10:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14717-RB | 1819 | CG14717-RB | 137..1059 | 16..938 | 4615 | 100 | Plus |
CG14717-RA | 1154 | CG14717-RA | 137..1059 | 16..938 | 4615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:10:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11696645..11697567 | 16..938 | 4615 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:10:04 has no hits.
BS15070.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:04 Download gff for
BS15070.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14717-RA | 138..1057 | 17..936 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:27:22 Download gff for
BS15070.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14717-RA | 138..1057 | 17..936 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:58:27 Download gff for
BS15070.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14717-RA | 138..1057 | 17..936 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:12:21 Download gff for
BS15070.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14717-RA | 138..1057 | 17..936 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:12:21 Download gff for
BS15070.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11696646..11697565 | 17..936 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:27:22 Download gff for
BS15070.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7522368..7523287 | 17..936 | 100 | | Plus |
BS15070.pep Sequence
Translation from 16 to 936
> BS15070.pep
MARQRLLGSILSKGGAQVLRNFQSFVQGTRLEYVSYTSPRNQMQAPPIVV
MHDLNLSLESWRQVAVNLSQVGLRQVITVDARNHGLSPYITGHSPMHLAA
DVEALMSHQRLNKIVALGHGMGGRAMMTLALTQPQLVERVILVDITPAPV
PSNFYLTRQVFEMMLQVAPSIPSNLSLSEGRTFILPLFQDVVHDASELRR
IIYNLRKMQDNTFGWAVNPQAVLSSWGEMMINYEATLGGLRPYMGEVLLI
AGSQSEFVTTTSIAVMQRYFPNTVVQILDAGHCVYEDQPEQFVELVVEFT
QTCLVC*
BS15070.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:10:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14717-PB | 306 | CG14717-PB | 1..306 | 1..306 | 1562 | 100 | Plus |
CG14717-PA | 306 | CG14717-PA | 1..306 | 1..306 | 1562 | 100 | Plus |
CG2059-PB | 308 | CG2059-PB | 39..303 | 31..299 | 379 | 33.7 | Plus |
CG2059-PA | 308 | CG2059-PA | 39..303 | 31..299 | 379 | 33.7 | Plus |