Clone BS15070 Report

Search the DGRC for BS15070

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:150
Well:70
Vector:pDNR-Dual
Associated Gene/TranscriptCG14717-RA
Protein status:BS15070.pep: full length peptide match
Sequenced Size:953

Clone Sequence Records

BS15070.3prime Sequence

822 bp (722 high quality bases) assembled on 2006-10-23

> BS15070.3prime
ATGGTCTAGAAAGCTTTCAACATACTAAGCATGTTTGAGTAAACTCCACG
ACTAGTTCAACAAATTGTTCCGGCTGATCCTCATACACACAGTGTCCAGC
ATCCAGAATCTGTACCACTGTATTTGGAAAGTATCTCTGCATCACGGCAA
TACTGGTCGTGGTCACGAATTCCGACTGGGAACCGGCTATGAGCAAGACT
TCGCCCATGTAGGGACGCAGTCCGCCCAAAGTGGCCTCGTAATTGATCAT
CATCTCCCCCCAGGAGCTTAGGACCGCCTGGGGATTAACTGCCCAGCCAA
AGGTGTTGTCCTGCATCTTGCGCAGATTGTAAATAATGCGACGCAGCTCG
GAGGCGTCGTGGACCACATCCTGGAACAGTGGCAGGATGAACGTACGCCC
CTCGGAAAGTGATAGATTTGAGGGAATACTGGGCGCCACCTGGAGCATCA
TCTCGAACACCTGCCGAGTGAGATAGAAGTTACTGGGCACCGGTGCTGGT
GTGATGTCCACCAGTATGACCCGCTCGACGAGTTGCGGCTGAGTGAGTGC
CAGTGTCATCATTGCCCGACCGCCCATTCCATGTCCAAGTGCAACGATCT
TGTTCAGTCTCTGGTGGCTCATCAGGGCCTCCACGTCGGCGGCCAGGTGC
ATTGGCGAATGCCCGGTTATGTAAGGACTAAGGCCATGATTCCGAGCATC
CACGGTGATCACCTGGCGCAATCCAACCTGACTGAGGTTAACAGCTACCT
GGCGCCAGGATTCCAGTGACAGATTGAGGTCGTGCATCACCACAATTGGT
GGCGCCTGCATCTGATTGCGCG

BS15070.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG14717-PA 921 CG14717-RA 116..921 822..17 4030 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:24:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG14717-RB 1819 CG14717-RB 253..1059 822..16 4035 100 Minus
CG14717-RA 1154 CG14717-RA 253..1059 822..16 4035 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:24:00
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11696761..11697567 822..16 4035 100 Minus
Blast to na_te.dros performed on 2015-02-10 16:24:03 has no hits.

BS15070.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:17 Download gff for BS15070.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14717-PA 116..921 17..822 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:49:28 Download gff for BS15070.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14717-PA 116..921 17..822 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 02:39:37 Download gff for BS15070.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14717-RA 253..1059 16..822 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:31:36 Download gff for BS15070.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14717-RA 253..1059 16..822 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:31:36 Download gff for BS15070.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 11696761..11697567 16..822 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 02:39:37 Download gff for BS15070.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7522483..7523289 16..822 100   Minus

BS15070.5prime Sequence

863 bp (767 high quality bases) assembled on 2006-10-23

> BS15070.5prime
GAAGTTATCCGTCGACATGGCAAGACAGCGACTTCTCGGCTCGATCCTTT
CCAAAGGCGGAGCCCAAGTGCTGCGAAACTTCCAGTCATTTGTCCAGGGC
ACTCGTTTGGAGTATGTCTCCTACACCTCGCCGCGCAATCAGATGCAGGC
GCCACCAATTGTGGTGATGCACGACCTCAATCTGTCACTGGAATCCTGGC
GCCAGGTAGCTGTTAACCTCAGTCAGGTTGGATTGCGCCAGGTGATCACC
GTGGATGCTCGGAATCATGGCCTTAGTCCTTACATAACCGGGCATTCGCC
AATGCACCTGGCCGCCGACGTGGAGGCCCTGATGAGCCACCAGAGACTGA
ACAAGATCGTTGCACTTGGACATGGAATGGGCGGTCGGGCAATGATGACA
CTGGCACTCACTCAGCCGCAACTCGTCGAGCGGGTCATACTGGTGGACAT
CACACCAGCACCGGTGCCCAGTAACTTCTATCTCACTCGGCAGGTGTTCG
AGATGATGCTCCAGGTGGCGCCCAGTATTCCCTCAAATCTATCACTTTCC
GAGGGGCGTACGTTCATCCTGCCACTGTTCCAGGATGTGGTCCACGACGC
CTCCGAGCTGCGTCGCATTATTTACAATCTGCGCAAGATGCAGGACAACA
CCTTTGGCTGGGCAGTTAATCCCCAGGCGGTCCTAAGCTCCTGGGGGGAG
ATGATGATCAATTACGAGGCCACTTTGGGCGGACTGCGTCCCTACATGGG
CGAAGTCTTGCTCATAGCCGGTTCCCAGTCGGAATTCGTGACCACGACCA
GTATTGCCGTGATGCAGAGATACTTTCCAAATACAGTGGTACAGATTCTG
GATGCTGGACACT

BS15070.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG14717-PA 921 CG14717-RA 1..847 17..863 4235 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:15:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG14717-RB 1819 CG14717-RB 137..984 16..863 4240 100 Plus
CG14717-RA 1154 CG14717-RA 137..984 16..863 4240 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:15:45
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11696645..11697492 16..863 4240 100 Plus
Blast to na_te.dros performed on 2015-02-13 06:15:46 has no hits.

BS15070.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:18 Download gff for BS15070.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14717-PA 1..847 17..863 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:49:30 Download gff for BS15070.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14717-PA 1..847 17..863 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:53:13 Download gff for BS15070.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14717-RA 137..984 16..863 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:20:00 Download gff for BS15070.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14717-RA 137..984 16..863 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:20:00 Download gff for BS15070.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 11696645..11697492 16..863 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:53:13 Download gff for BS15070.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7522367..7523214 16..863 100   Plus

BS15070.complete Sequence

953 bp assembled on 2010-02-09

GenBank Submission: KX805822

> BS15070.complete
GAAGTTATCAGTCGACATGGCAAGACAGCGACTTCTCGGCTCGATCCTTT
CCAAAGGCGGAGCCCAAGTGCTGCGAAACTTCCAGTCATTTGTCCAGGGC
ACTCGTTTGGAGTATGTCTCCTACACCTCGCCGCGCAATCAGATGCAGGC
GCCACCAATTGTGGTGATGCACGACCTCAATCTGTCACTGGAATCCTGGC
GCCAGGTAGCTGTTAACCTCAGTCAGGTTGGATTGCGCCAGGTGATCACC
GTGGATGCTCGGAATCATGGCCTTAGTCCTTACATAACCGGGCATTCGCC
AATGCACCTGGCCGCCGACGTGGAGGCCCTGATGAGCCACCAGAGACTGA
ACAAGATCGTTGCACTTGGACATGGAATGGGCGGTCGGGCAATGATGACA
CTGGCACTCACTCAGCCGCAACTCGTCGAGCGGGTCATACTGGTGGACAT
CACACCAGCACCGGTGCCCAGTAACTTCTATCTCACTCGGCAGGTGTTCG
AGATGATGCTCCAGGTGGCGCCCAGTATTCCCTCAAATCTATCACTTTCC
GAGGGGCGTACGTTCATCCTGCCACTGTTCCAGGATGTGGTCCACGACGC
CTCCGAGCTGCGTCGCATTATTTACAATCTGCGCAAGATGCAGGACAACA
CCTTTGGCTGGGCAGTTAATCCCCAGGCGGTCCTAAGCTCCTGGGGGGAG
ATGATGATCAATTACGAGGCCACTTTGGGCGGACTGCGTCCCTACATGGG
CGAAGTCTTGCTCATAGCCGGTTCCCAGTCGGAATTCGTGACCACGACCA
GTATTGCCGTGATGCAGAGATACTTTCCAAATACAGTGGTACAGATTCTG
GATGCTGGACACTGTGTGTATGAGGATCAGCCGGAACAATTTGTTGAACT
AGTCGTGGAGTTTACTCAAACATGCTTAGTATGTTGAAAGCTTTCTAGAC
CAT

BS15070.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:10:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG14717-RB 921 CG14717-PB 1..921 17..937 4605 100 Plus
CG14717-RA 921 CG14717-PA 1..921 17..937 4605 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:10:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG14717-RB 1819 CG14717-RB 137..1059 16..938 4615 100 Plus
CG14717-RA 1154 CG14717-RA 137..1059 16..938 4615 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:10:03
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11696645..11697567 16..938 4615 100 Plus
Blast to na_te.dros performed on 2014-11-27 13:10:04 has no hits.

BS15070.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:04 Download gff for BS15070.complete
Subject Subject Range Query Range Percent Splice Strand
CG14717-RA 138..1057 17..936 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:27:22 Download gff for BS15070.complete
Subject Subject Range Query Range Percent Splice Strand
CG14717-RA 138..1057 17..936 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:58:27 Download gff for BS15070.complete
Subject Subject Range Query Range Percent Splice Strand
CG14717-RA 138..1057 17..936 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:12:21 Download gff for BS15070.complete
Subject Subject Range Query Range Percent Splice Strand
CG14717-RA 138..1057 17..936 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:12:21 Download gff for BS15070.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11696646..11697565 17..936 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:27:22 Download gff for BS15070.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7522368..7523287 17..936 100   Plus

BS15070.pep Sequence

Translation from 16 to 936

> BS15070.pep
MARQRLLGSILSKGGAQVLRNFQSFVQGTRLEYVSYTSPRNQMQAPPIVV
MHDLNLSLESWRQVAVNLSQVGLRQVITVDARNHGLSPYITGHSPMHLAA
DVEALMSHQRLNKIVALGHGMGGRAMMTLALTQPQLVERVILVDITPAPV
PSNFYLTRQVFEMMLQVAPSIPSNLSLSEGRTFILPLFQDVVHDASELRR
IIYNLRKMQDNTFGWAVNPQAVLSSWGEMMINYEATLGGLRPYMGEVLLI
AGSQSEFVTTTSIAVMQRYFPNTVVQILDAGHCVYEDQPEQFVELVVEFT
QTCLVC*

BS15070.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:10:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG14717-PB 306 CG14717-PB 1..306 1..306 1562 100 Plus
CG14717-PA 306 CG14717-PA 1..306 1..306 1562 100 Plus
CG2059-PB 308 CG2059-PB 39..303 31..299 379 33.7 Plus
CG2059-PA 308 CG2059-PA 39..303 31..299 379 33.7 Plus