Clone Sequence Records
BS15072.complete Sequence
1616 bp assembled on 2009-12-07
GenBank Submission: KX802065
> BS15072.complete
GAAGTTATCAGTCGACATGTTTGATACCGCATTGGGAACAGTATTGAGCG
TTATGGTGCAGTTGATAATCCTAGTATTTGGTCAGATTCTGGGACAAGTG
GTCCAGCATCCATTGATTACTACTGGACTTTGCCTGTTGGGAGCATTTGC
ATACCACGCGGATCAGGAAACACTCAAGGAGATATATCAGCGTGTACTCC
TTTTGATTAGGACTCCACTTCAATTTGGGAACACATCTTGCTCAAGAAAT
TCTGCTCCAGTATACGGTTACGACATGCAACATGGTCCGCATACTTGGTT
GCCGAAGTCCAGGTCATCTTCCAGTTCTGTGGAGGAAGCGACTTTCTTCC
AGAGCCCAGTCAACATCGATGAATCTCAAATTCAACGCATGGCCATAAGA
GAGCTGCTGAGCTGGAACCACTATGATGATCTGCCCGCCAGCATCACTCT
GGAGAATACGGGTCAGACACTTATCCTCCGTGCCCAGTTCCACGGTAATG
CACCTACTATCAGTGGAGCTGATCTCCTGGCCAGCTATACGTTTCTGGAA
CTGCGCTTCCACTGGGGCTGGTGCAACAGCGAGGGATCCGAGCATACGAT
CAACCACCGAAAGTTCCCACTTGAGATGCAGGTGATGCACAAAACGGGAT
CGGGTATTCCCCGTACTTGCACCAGCAGCTATGATCTCCTGATGATCGGA
TACGTCTTTGAGCTATCCGCGCACAATCCGTTCCTGGATCCCCTGGTGCA
GAATTTGCGATTGGTTCAGAAGCCTGGAAAGCGTGTCCAGATTTCTCCAT
TTCCCATATCCTACTTGATGTATCAATTTCGATCTGGATTCTATTCCTAC
GGCGGTTCGCTGACCCATCCGCCCTGTTACCAGGGCACCGAATGGTTCAT
CTTTCCCGAATCCCTAGCCATTAGCGACTTTCAGCTGCGTCACTTTCGTT
TGCTCCTAGGTCCGGATGGGATCTCGCCCATAGCCCGTAACAGCCGACCA
GTCCAGCACATGGGCAATCGAGTTGTAAGCCTAAACTGCTTCTGCCCATA
CGATGCCGCCCAGTTGTCCAGAATGCATGTGGAGCTATGCCAGGCTCAAG
CTCAGGAGGAGCACGAAGAGGAACGTATCGAGCAGGAGCAGCAATTGGAA
CTAGAGCGCGAACTGGAGCGGCAAAGGGAAAGCGACTTGAAAGCTCAGCA
GGAGCAAGCAAGCGAGGCGGCCATCGCTGCTTCCGAGGATGAAGGTCAGC
TAATTGAGACCATAGATACCACGACCATAATAACTAGTAGCAGCAACACT
AGCATATGCATGACTACGCTGATGCGGAAGGATTCGCCTAGGCAACTGGA
ACAGCCATCTCAGATGCCTATGATGGCTCCCAATCAGGGTAACTTTTGCA
ATCCTGGCATTGTGATATTCAGCGGTGTCAATGAATCCAAGTCCAAGTGC
GGCATCCATCAGGATACACCGGAGGAGCTAATGATCCATAACAGAGGAAC
GGGAAGAAACATGGGTGTACAGAATGGCTGCAAGGCCGATGCCTTTTGCG
GCGTGGGCGATGGCGTCAACATCGGAATTCGCATGGAGCTGGTCGAGTAG
AAGCTTTCTAGACCAT
BS15072.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:49:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12309-RA | 1584 | CG12309-PA | 1..1584 | 17..1600 | 7920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:49:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12309-RA | 2003 | CG12309-RA | 205..1790 | 15..1600 | 7930 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:49:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10725474..10727059 | 15..1600 | 7930 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:49:53 has no hits.
BS15072.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:41:56 Download gff for
BS15072.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12309-RA | 213..1790 | 23..1600 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:59:01 Download gff for
BS15072.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12309-RA | 213..1790 | 23..1600 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:59:51 Download gff for
BS15072.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12309-RA | 213..1790 | 23..1600 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:57:50 Download gff for
BS15072.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12309-RA | 213..1790 | 23..1600 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:57:50 Download gff for
BS15072.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10725482..10727059 | 23..1600 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:59:01 Download gff for
BS15072.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6612987..6614564 | 23..1600 | 100 | | Plus |
BS15072.3prime Sequence
878 bp (717 high quality bases) assembled on 2006-10-23
> BS15072.3prime
ATGGTCTAGAAAGCTTCTACTCGACCAGCTCCATGCGAATTCCGATGTTG
ACGCCATCGCCCACGCCGCAAAAGGCATCGGCCTTGCAGCCATTCTGTAC
ACCCATGTTTCTTCCCGTTCCTCTGTTATGGATCATTAGCTCCTCCGGTG
TATCCTGATGGATGCCGCACTTGGACTTGGATTCATTGACACCGCTGAAT
ATCACAATGCCAGGATTGCAAAAGTTACCCTGATTGGGAGCCATCATAGG
CATCTGAGATGGCTGTTCCAGTTGCCTAGGCGAATCCTTCCGCATCAGCG
TAGTCATGCATATGCTAGTGTTGCTGCTACTAGTTATTATGGTCGTGGTA
TCTATGGTCTCAATTAGCTGACCTTCATCCTCGGAAGCAGCGATGGCCGC
CTCGCTTGCTTGCTCCTGCTGAGCTTTCAAGTCGCTTTCCCTTTGCCGCT
CCAGTTCGCGCTCTAGTTCCAATTGCTGCTCCTGCTCGATACGTTCCTCT
TCGTGCTCCTCCTGAGCTTGAGCCTGGCATAGCTCCACATGCATTCTGGA
CAACTGGGCGGCATCGTATGGGCAGAAGCAGTTTAGGCTTACAACTCGAT
TGCCCATGTGCTGGACTGGTCGGCTGTTACGGGCTATGGGCGAGATCCCA
TCCGGACCTAGGAGCAAACGAAAGTGACGCAGCTGAAAGTCGCTAATGGC
TAGGGATTCGGGAAAGATGAACCATTCGGTGCCCTGGTAACAGGGCGGAT
GGGTCAGCGAACCGCCGTAGGAATAGAATCCAGATCGAAATTGATACATC
AAGTAGGATATGGGGAATGGAGAAATCTGGACACGCTTTCCAAGCTTCTG
AACCAATCGCAAATTCTGCACCAGGGGA
BS15072.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12309-PA | 1584 | CG12309-RA | 723..1584 | 878..17 | 4260 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:07:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12309-RA | 2003 | CG12309-RA | 929..1790 | 878..17 | 4280 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:07:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10726198..10727059 | 878..17 | 4280 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-13 07:07:11 has no hits.
BS15072.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:19 Download gff for
BS15072.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12309-PA | 724..1584 | 17..877 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:49:31 Download gff for
BS15072.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12309-PA | 724..1584 | 17..877 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 20:50:36 Download gff for
BS15072.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12309-RA | 930..1792 | 12..877 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:25:59 Download gff for
BS15072.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12309-RA | 930..1792 | 12..877 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:25:59 Download gff for
BS15072.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10726199..10727061 | 12..877 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 20:50:36 Download gff for
BS15072.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6613704..6614566 | 12..877 | 99 | | Minus |
BS15072.5prime Sequence
841 bp (730 high quality bases) assembled on 2006-10-23
> BS15072.5prime
GAAGTTATCATTCGACATGTTTGATACCGCATTGGGAACAGTATTGAGCG
TTATGGTGCAGTTGATAATCCTAGTATTTGGTCATATTCTGGGACAAGTG
GTCCAGCATCCATTGATTACTACTGGACTTTGCCTGTTGGGAGCATTTGC
ATACCACGCGGATCAGGAAACACTCAAGGAGATATATCAGCGTGTACTCC
TTTTGATTAGGACTCCACTTCAATTTGGGAACACATCTTGCTCAAGAAAT
TCTGCTCCAGTATACGGTTACGACATGCAACATGGTCCGCATACTTGGTT
GCCGAAGTCCAGGTCATCTTCCAGTTCTGTGGAGGAAGCGACTTTCTTCC
AGAGCCCAGTCAACATCGATGAATCTCAAATTCAACGCATGGCCATAAGA
GAGCTGCTGAGCTGGAACCACTATGATGATCTGCCCGCCAGCATCACTCT
GGAGAATACGGGTCAGACACTTATCCTCCGTGCCCAGTTCCACGGTAATG
CACCTACTATCAGTGGAGCTGATCTCCTGGCCAGCTATACGTTTCTGGAA
CTGCGCTTCCACTGGGGCTGGTGCAACAGCGAGGGATCCGAGCATACGAT
CAACCACCGAAAGTTCCCACTTGAGATGCAGGTGATGCACAANACGGGAT
CGGGTATTCCCCGTACTTGCACCAGCAGCTATGATCTCCTGATGATCGGA
TACGTCTTTGAGCTATCCGCGCACAATCCGTTCCTGGATCCCCTGGTGCA
GAATTTGCGATTGGTTCAGAAGCCTGGAAAGCGTGTCCAGATTTCTCCAT
TTCCCATATCCTACTTGATGTATCATTTTCGATCTGGATTC
BS15072.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12309-PA | 1584 | CG12309-RA | 1..825 | 17..841 | 4056 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:55:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12309-RA | 2003 | CG12309-RA | 205..1031 | 15..841 | 4094 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:55:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10725474..10726300 | 15..841 | 4094 | 99.6 | Plus |
Blast to na_te.dros performed on 2015-02-12 23:55:39 has no hits.
BS15072.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:20 Download gff for
BS15072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12309-PA | 1..825 | 17..841 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:49:32 Download gff for
BS15072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12309-PA | 1..825 | 17..841 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:21:57 Download gff for
BS15072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12309-RA | 205..1031 | 15..841 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:27:53 Download gff for
BS15072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12309-RA | 205..1031 | 15..841 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:27:53 Download gff for
BS15072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10725474..10726300 | 15..841 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:21:57 Download gff for
BS15072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6612979..6613805 | 15..841 | 99 | | Plus |
BS15072.pep Sequence
Translation from 16 to 1599
> BS15072.pep
MFDTALGTVLSVMVQLIILVFGQILGQVVQHPLITTGLCLLGAFAYHADQ
ETLKEIYQRVLLLIRTPLQFGNTSCSRNSAPVYGYDMQHGPHTWLPKSRS
SSSSVEEATFFQSPVNIDESQIQRMAIRELLSWNHYDDLPASITLENTGQ
TLILRAQFHGNAPTISGADLLASYTFLELRFHWGWCNSEGSEHTINHRKF
PLEMQVMHKTGSGIPRTCTSSYDLLMIGYVFELSAHNPFLDPLVQNLRLV
QKPGKRVQISPFPISYLMYQFRSGFYSYGGSLTHPPCYQGTEWFIFPESL
AISDFQLRHFRLLLGPDGISPIARNSRPVQHMGNRVVSLNCFCPYDAAQL
SRMHVELCQAQAQEEHEEERIEQEQQLELERELERQRESDLKAQQEQASE
AAIAASEDEGQLIETIDTTTIITSSSNTSICMTTLMRKDSPRQLEQPSQM
PMMAPNQGNFCNPGIVIFSGVNESKSKCGIHQDTPEELMIHNRGTGRNMG
VQNGCKADAFCGVGDGVNIGIRMELVE*
BS15072.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:44:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12309-PA | 527 | CG12309-PA | 1..527 | 1..527 | 2772 | 100 | Plus |
| CG9235-PA | 332 | CG9235-PA | 68..326 | 71..340 | 655 | 49.3 | Plus |
| CG15227-PB | 295 | CG15227-PB | 74..294 | 113..340 | 328 | 33.5 | Plus |
| CAH2-PA | 335 | CG6906-PA | 28..285 | 83..340 | 254 | 25.8 | Plus |
| CG5379-PB | 303 | CG5379-PB | 6..301 | 53..371 | 238 | 25.7 | Plus |
