Clone Sequence Records
BS15075.3prime Sequence
444 bp (444 high quality bases) assembled on 2006-10-23
> BS15075.3prime
ATGGTCTAGAAAGCTTTTAGACCTTAGGAGGCTTAGCATAGTCAAGATCT
GGTTGGGGCACCTGCTCGCTGACCTGCTTGGCGGCCAGCGAAATCTGGGG
CAGGATTGCTCCGCCCTCTGGTACAAATCCGTGGTCATCGGCCTTGTAGG
TGACGGTCACCTCCTGTCCGTTGGCATCGAAGTAGGAGTAGGAGCCGCTG
ATCTCCAGGTACTCGTTCTCGGTGCCTTGGTTTCTGACCACGGCCTCCTC
CCTTCTGTGGGTGCCGTCCTCGCCGAGGTAAGAGAAGTTGTACGATCCAT
CCTCGTGCTTTTCGTGAGATGATTCGAGAATGGCCACCGGTGGCTGGGTG
GTGGATGTGACGTGGTCCACTGGAGCACTCAGCACGACGGCCGTGCAAAG
GGACAGGGCGACGATGAGAATCTTAAACATGTCGACTGATAACT
BS15075.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7160-PA | 414 | CG7160-RA | 1..414 | 430..17 | 2070 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:27:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cpr78E-RA | 463 | CG7160-RA | 24..438 | 431..17 | 2075 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:27:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21666477..21666878 | 17..418 | 2010 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 15:27:34 has no hits.
BS15075.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:25 Download gff for
BS15075.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7160-PA | 1..414 | 17..430 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:49:37 Download gff for
BS15075.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7160-PA | 1..414 | 17..430 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:54:20 Download gff for
BS15075.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr78E-RA | 18..438 | 17..438 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:50:22 Download gff for
BS15075.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr78E-RA | 18..438 | 17..438 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:50:22 Download gff for
BS15075.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21666477..21666878 | 17..418 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:54:20 Download gff for
BS15075.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21659577..21659978 | 17..418 | 100 | <- | Plus |
BS15075.5prime Sequence
444 bp (444 high quality bases) assembled on 2006-10-23
> BS15075.5prime
GAAGTTATCATTCGACATGTTTAAGATTCTCATCGTCGCCCTGTCCCTTT
GCACGGCCGTCGTGCTGAGTGCTCCAGTGGACCACGTCACATCCACCACC
CAGCCACCGGTGGCCATTCTCGAATCATCTCACGAAAAGCACGAGGATGG
ATCGTACAACTTCTCTTACCTCGGCGAGGACGGCACCCACAGAAGGGAGG
AGGCCGTGGTCAGAAACCAAGGCACCGAGAACGAGTACCTGGAGATCAGC
GGCTCCTACTCCTACTTCGATGCCAACGGACAGGAGGTGACCGTCACCTA
CAAGGCCGATGACCACGGATTTGTACCAGAGGGCGGAGCAATCCTGCCCC
AGATTTCGCTGGCCGCCAAGCAGGTCAGCGAGCAGGTGCCCCAACCAGAT
CTTGACTATGCTAAGCCTCCTAAGGTCTAAAAGCTTTCTAGACC
BS15075.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7160-PA | 414 | CG7160-RA | 1..414 | 17..430 | 2070 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:36:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cpr78E-RA | 463 | CG7160-RA | 24..438 | 16..430 | 2075 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:36:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21666477..21666878 | 430..29 | 2010 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 12:36:53 has no hits.
BS15075.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:26 Download gff for
BS15075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7160-PA | 1..414 | 17..430 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:49:38 Download gff for
BS15075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7160-PA | 1..414 | 17..430 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:03:02 Download gff for
BS15075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr78E-RA | 18..438 | 9..430 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:16:13 Download gff for
BS15075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr78E-RA | 18..438 | 9..430 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:16:13 Download gff for
BS15075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21666477..21666878 | 29..430 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:03:02 Download gff for
BS15075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21659577..21659978 | 29..430 | 100 | <- | Minus |
BS15075.complete Sequence
446 bp assembled on 2006-11-01
GenBank Submission: FJ637868
> BS15075.complete
GAAGTTATCAGTCGACATGTTTAAGATTCTCATCGTCGCCCTGTCCCTTT
GCACGGCCGTCGTGCTGAGTGCTCCAGTGGACCACGTCACATCCACCACC
CAGCCACCGGTGGCCATTCTCGAATCATCTCACGAAAAGCACGAGGATGG
ATCGTACAACTTCTCTTACCTCGGCGAGGACGGCACCCACAGAAGGGAGG
AGGCCGTGGTCAGAAACCAAGGCACCGAGAACGAGTACCTGGAGATCAGC
GGCTCCTACTCCTACTTCGATGCCAACGGACAGGAGGTGACCGTCACCTA
CAAGGCCGATGACCACGGATTTGTACCAGAGGGCGGAGCAATCCTGCCCC
AGATTTCGCTGGCCGCCAAGCAGGTCAGCGAGCAGGTGCCCCAACCAGAT
CTTGACTATGCTAAGCCTCCTAAGGTCTAAAAGCTTTCTAGACCAT
BS15075.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:42:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cpr78E-RA | 414 | CG7160-PA | 1..414 | 17..430 | 2070 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:42:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cpr78E-RA | 463 | CG7160-RA | 24..438 | 16..430 | 2075 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:42:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21666477..21666878 | 430..29 | 2010 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 06:42:56 has no hits.
BS15075.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:33:48 Download gff for
BS15075.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr78E-RA | 1..414 | 17..430 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:54:16 Download gff for
BS15075.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr78E-RA | 18..438 | 9..430 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:51:42 Download gff for
BS15075.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr78E-RA | 31..436 | 23..428 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:33:49 Download gff for
BS15075.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr78E-RA | 18..438 | 9..430 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:52:27 Download gff for
BS15075.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr78E-RA | 31..436 | 23..428 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:52:27 Download gff for
BS15075.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21666479..21666880 | 23..428 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:51:42 Download gff for
BS15075.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21659579..21659980 | 23..428 | 99 | | Minus |
BS15075.pep Sequence
Translation from 16 to 429
> BS15075.pep
MFKILIVALSLCTAVVLSAPVDHVTSTTQPPVAILESSHEKHEDGSYNFS
YLGEDGTHRREEAVVRNQGTENEYLEISGSYSYFDANGQEVTVTYKADDH
GFVPEGGAILPQISLAAKQVSEQVPQPDLDYAKPPKV*
BS15075.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:29:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cpr78E-PA | 137 | CG7160-PA | 1..137 | 1..137 | 708 | 100 | Plus |
Cpr47Eb-PA | 214 | CG13224-PA | 1..136 | 1..133 | 227 | 42.3 | Plus |
Cpr47Ec-PA | 131 | CG9077-PA | 1..118 | 1..122 | 210 | 42.3 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 121..231 | 19..121 | 199 | 39.6 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 121..231 | 19..121 | 199 | 39.6 | Plus |