Clone BS15079 Report

Search the DGRC for BS15079

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:150
Well:79
Vector:pDNR-Dual
Associated Gene/TranscriptObp99b-RA
Protein status:BS15079.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15079.3prime Sequence

480 bp (480 high quality bases) assembled on 2006-10-23

> BS15079.3prime
ATGGTCTAGAAAGCTTTTAGACCTTGACGCTGTGCTGCACCAGCTGCAGG
TTGGAGTTCATGAAGCACATGCCGGCGTGGTAGGCCTTCGAGCAGGAGTC
GCCCTCCTTGGAGTGGGTCTCGGCGCAGTGGGCGATCTTCTGGTGCACCT
CGTCCGATTCGTGCACCTCAACTCCAGGGCCGGCCAGCTGGATGTGGATC
TTGTGGACATCGAATCCGTGCTCGGTGTCGTAGAAGCCGAACTTCTGGAA
GATGCACTCCAGGTAGCAGTGGGTCACCGCGTCATCGGGGTACTGCCACT
TCTTGTACTTCTCCACGAGCTCCTCGCTGGCGTGAACCTTCTCCACGCAC
TGCGTGCGATAGTTGGTCAGATCCTCGTGCGTCTTCACCACATAGTCGTG
GTGATGGTGATGGTGATCGGCCAGGACAAAGGCCAGACCCAATAGGAGAA
CGATGAGAACCTTCATGTCGACTGATAACT

BS15079.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG7592-PA 450 Obp99b-RA 1..450 466..17 2250 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:40:48
Subject Length Description Subject Range Query Range Score Percent Strand
Obp99b-RB 586 CG7592-RB 52..503 467..16 2260 100 Minus
Obp99b-RA 574 CG7592-RA 40..491 467..16 2260 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:40:47
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29716337..29716788 16..467 2260 100 Plus
Blast to na_te.dros performed 2015-02-13 12:40:47
Subject Length Description Subject Range Query Range Score Percent Strand
Max-element 8556 Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). 7609..7647 123..161 105 74.4 Plus

BS15079.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:27 Download gff for BS15079.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7592-PA 1..450 17..466 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:49:40 Download gff for BS15079.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7592-PA 1..450 17..466 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:03:37 Download gff for BS15079.3prime
Subject Subject Range Query Range Percent Splice Strand
Obp99b-RA 32..491 16..477 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:19:23 Download gff for BS15079.3prime
Subject Subject Range Query Range Percent Splice Strand
Obp99b-RA 32..491 16..477 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:19:23 Download gff for BS15079.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 29716337..29716796 16..477 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:03:37 Download gff for BS15079.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25542059..25542518 16..477 99   Plus

BS15079.5prime Sequence

480 bp (480 high quality bases) assembled on 2006-10-23

> BS15079.5prime
GAAGTTATCCTTCGACATGAAGGTTCTCATCGTTCTCCTATTGGGTCTGG
CCTTTGTCCTGGCCGATCACCATCACCATCACCACGACTATGTGGTGAAG
ACGCACGAGGATCTGACCAACTATCGCACGCAGTGCGTGGAGAAGGTTCA
CGCCAGCGAGGAGCTCGTGGAGAAGTACAAGAAGTGGCAGTACCCCGATG
ACGCGGTGACCCACTGCTACCTGGAGTGCATCTTCCAGAAGTTCGGCTTC
TACGACACCGAGCACGGATTCGATGTCCACAAGATCCACATCCAGCTGGC
CGGCCCTGGAGTTGAGGTGCACGAATCGGACGAGGTGCACCAGAAGATCG
CCCACTGCGCCGAGACCCACTCCAAGGAGGGCGACTCCTGCTCGAAGGCC
TACCACGCCGGCATGTGCTTCATGAACTCCAACCTGCAGCTGGTGCAGCA
CAGCGTCAAGGTCTAAAAGCTTTCTAGACC

BS15079.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG7592-PA 450 Obp99b-RA 1..450 17..466 2250 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:36:27
Subject Length Description Subject Range Query Range Score Percent Strand
Obp99b-RB 586 CG7592-RB 52..503 16..467 2260 100 Plus
Obp99b-RA 574 CG7592-RA 40..491 16..467 2260 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:36:20
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29716337..29716788 467..16 2260 100 Minus
Blast to na_te.dros performed 2015-02-11 04:36:25
Subject Length Description Subject Range Query Range Score Percent Strand
Max-element 8556 Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). 7609..7647 360..322 105 74.4 Minus

BS15079.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:28 Download gff for BS15079.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7592-PA 1..450 17..466 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:49:41 Download gff for BS15079.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7592-PA 1..450 17..466 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:37:34 Download gff for BS15079.5prime
Subject Subject Range Query Range Percent Splice Strand
Obp99b-RA 31..491 7..467 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 06:38:40 Download gff for BS15079.5prime
Subject Subject Range Query Range Percent Splice Strand
Obp99b-RA 31..491 7..467 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 06:38:40 Download gff for BS15079.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 29716337..29716797 7..467 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:37:34 Download gff for BS15079.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25542059..25542519 7..467 99   Minus

BS15079.complete Sequence

482 bp assembled on 2006-11-01

GenBank Submission: FJ637869

> BS15079.complete
GAAGTTATCAGTCGACATGAAGGTTCTCATCGTTCTCCTATTGGGTCTGG
CCTTTGTCCTGGCCGATCACCATCACCATCACCACGACTATGTGGTGAAG
ACGCACGAGGATCTGACCAACTATCGCACGCAGTGCGTGGAGAAGGTTCA
CGCCAGCGAGGAGCTCGTGGAGAAGTACAAGAAGTGGCAGTACCCCGATG
ACGCGGTGACCCACTGCTACCTGGAGTGCATCTTCCAGAAGTTCGGCTTC
TACGACACCGAGCACGGATTCGATGTCCACAAGATCCACATCCAGCTGGC
CGGCCCTGGAGTTGAGGTGCACGAATCGGACGAGGTGCACCAGAAGATCG
CCCACTGCGCCGAGACCCACTCCAAGGAGGGCGACTCCTGCTCGAAGGCC
TACCACGCCGGCATGTGCTTCATGAACTCCAACCTGCAGCTGGTGCAGCA
CAGCGTCAAGGTCTAAAAGCTTTCTAGACCAT

BS15079.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:06:08
Subject Length Description Subject Range Query Range Score Percent Strand
Obp99b-RB 450 CG7592-PB 1..450 17..466 2250 100 Plus
Obp99b-RA 450 CG7592-PA 1..450 17..466 2250 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:06:10
Subject Length Description Subject Range Query Range Score Percent Strand
Obp99b-RB 586 CG7592-RB 52..503 16..467 2260 100 Plus
Obp99b-RA 574 CG7592-RA 40..491 16..467 2260 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:06:06
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29716337..29716788 467..16 2260 100 Minus
Blast to na_te.dros performed 2014-11-27 01:06:07
Subject Length Description Subject Range Query Range Score Percent Strand
Max-element 8556 Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). 7609..7647 360..322 105 74.4 Minus

BS15079.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:33:50 Download gff for BS15079.complete
Subject Subject Range Query Range Percent Splice Strand
Obp99b-RA 1..450 17..466 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:06:31 Download gff for BS15079.complete
Subject Subject Range Query Range Percent Splice Strand
Obp99b-RA 15..474 6..467 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:45:00 Download gff for BS15079.complete
Subject Subject Range Query Range Percent Splice Strand
Obp99b-RA 41..488 17..464 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:33:50 Download gff for BS15079.complete
Subject Subject Range Query Range Percent Splice Strand
Obp99b-RA 15..474 6..467 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:18:30 Download gff for BS15079.complete
Subject Subject Range Query Range Percent Splice Strand
Obp99b-RA 41..488 17..464 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:18:30 Download gff for BS15079.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29716340..29716787 17..464 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:45:00 Download gff for BS15079.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25542062..25542509 17..464 100   Minus

BS15079.pep Sequence

Translation from 16 to 465

> BS15079.pep
MKVLIVLLLGLAFVLADHHHHHHDYVVKTHEDLTNYRTQCVEKVHASEEL
VEKYKKWQYPDDAVTHCYLECIFQKFGFYDTEHGFDVHKIHIQLAGPGVE
VHESDEVHQKIAHCAETHSKEGDSCSKAYHAGMCFMNSNLQLVQHSVKV*

BS15079.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:29:48
Subject Length Description Subject Range Query Range Score Percent Strand
Obp99b-PB 149 CG7592-PB 1..149 1..149 823 100 Plus
Obp99b-PA 149 CG7592-PA 1..149 1..149 823 100 Plus
Obp99a-PB 142 CG18111-PB 5..138 3..147 290 37.9 Plus
Obp99a-PA 142 CG18111-PA 5..138 3..147 290 37.9 Plus
Obp44a-PB 143 CG2297-PB 7..141 3..148 216 34.9 Plus