Clone Sequence Records
BS15079.3prime Sequence
480 bp (480 high quality bases) assembled on 2006-10-23
> BS15079.3prime
ATGGTCTAGAAAGCTTTTAGACCTTGACGCTGTGCTGCACCAGCTGCAGG
TTGGAGTTCATGAAGCACATGCCGGCGTGGTAGGCCTTCGAGCAGGAGTC
GCCCTCCTTGGAGTGGGTCTCGGCGCAGTGGGCGATCTTCTGGTGCACCT
CGTCCGATTCGTGCACCTCAACTCCAGGGCCGGCCAGCTGGATGTGGATC
TTGTGGACATCGAATCCGTGCTCGGTGTCGTAGAAGCCGAACTTCTGGAA
GATGCACTCCAGGTAGCAGTGGGTCACCGCGTCATCGGGGTACTGCCACT
TCTTGTACTTCTCCACGAGCTCCTCGCTGGCGTGAACCTTCTCCACGCAC
TGCGTGCGATAGTTGGTCAGATCCTCGTGCGTCTTCACCACATAGTCGTG
GTGATGGTGATGGTGATCGGCCAGGACAAAGGCCAGACCCAATAGGAGAA
CGATGAGAACCTTCATGTCGACTGATAACT
BS15079.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7592-PA | 450 | Obp99b-RA | 1..450 | 466..17 | 2250 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:40:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp99b-RB | 586 | CG7592-RB | 52..503 | 467..16 | 2260 | 100 | Minus |
Obp99b-RA | 574 | CG7592-RA | 40..491 | 467..16 | 2260 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:40:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29716337..29716788 | 16..467 | 2260 | 100 | Plus |
Blast to na_te.dros performed 2015-02-13 12:40:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 7609..7647 | 123..161 | 105 | 74.4 | Plus |
BS15079.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:27 Download gff for
BS15079.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7592-PA | 1..450 | 17..466 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:49:40 Download gff for
BS15079.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7592-PA | 1..450 | 17..466 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:03:37 Download gff for
BS15079.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99b-RA | 32..491 | 16..477 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:19:23 Download gff for
BS15079.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99b-RA | 32..491 | 16..477 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:19:23 Download gff for
BS15079.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29716337..29716796 | 16..477 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:03:37 Download gff for
BS15079.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25542059..25542518 | 16..477 | 99 | | Plus |
BS15079.5prime Sequence
480 bp (480 high quality bases) assembled on 2006-10-23
> BS15079.5prime
GAAGTTATCCTTCGACATGAAGGTTCTCATCGTTCTCCTATTGGGTCTGG
CCTTTGTCCTGGCCGATCACCATCACCATCACCACGACTATGTGGTGAAG
ACGCACGAGGATCTGACCAACTATCGCACGCAGTGCGTGGAGAAGGTTCA
CGCCAGCGAGGAGCTCGTGGAGAAGTACAAGAAGTGGCAGTACCCCGATG
ACGCGGTGACCCACTGCTACCTGGAGTGCATCTTCCAGAAGTTCGGCTTC
TACGACACCGAGCACGGATTCGATGTCCACAAGATCCACATCCAGCTGGC
CGGCCCTGGAGTTGAGGTGCACGAATCGGACGAGGTGCACCAGAAGATCG
CCCACTGCGCCGAGACCCACTCCAAGGAGGGCGACTCCTGCTCGAAGGCC
TACCACGCCGGCATGTGCTTCATGAACTCCAACCTGCAGCTGGTGCAGCA
CAGCGTCAAGGTCTAAAAGCTTTCTAGACC
BS15079.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7592-PA | 450 | Obp99b-RA | 1..450 | 17..466 | 2250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:36:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp99b-RB | 586 | CG7592-RB | 52..503 | 16..467 | 2260 | 100 | Plus |
Obp99b-RA | 574 | CG7592-RA | 40..491 | 16..467 | 2260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:36:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29716337..29716788 | 467..16 | 2260 | 100 | Minus |
Blast to na_te.dros performed 2015-02-11 04:36:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 7609..7647 | 360..322 | 105 | 74.4 | Minus |
BS15079.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:28 Download gff for
BS15079.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7592-PA | 1..450 | 17..466 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:49:41 Download gff for
BS15079.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7592-PA | 1..450 | 17..466 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:37:34 Download gff for
BS15079.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99b-RA | 31..491 | 7..467 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 06:38:40 Download gff for
BS15079.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99b-RA | 31..491 | 7..467 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 06:38:40 Download gff for
BS15079.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29716337..29716797 | 7..467 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:37:34 Download gff for
BS15079.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25542059..25542519 | 7..467 | 99 | | Minus |
BS15079.complete Sequence
482 bp assembled on 2006-11-01
GenBank Submission: FJ637869
> BS15079.complete
GAAGTTATCAGTCGACATGAAGGTTCTCATCGTTCTCCTATTGGGTCTGG
CCTTTGTCCTGGCCGATCACCATCACCATCACCACGACTATGTGGTGAAG
ACGCACGAGGATCTGACCAACTATCGCACGCAGTGCGTGGAGAAGGTTCA
CGCCAGCGAGGAGCTCGTGGAGAAGTACAAGAAGTGGCAGTACCCCGATG
ACGCGGTGACCCACTGCTACCTGGAGTGCATCTTCCAGAAGTTCGGCTTC
TACGACACCGAGCACGGATTCGATGTCCACAAGATCCACATCCAGCTGGC
CGGCCCTGGAGTTGAGGTGCACGAATCGGACGAGGTGCACCAGAAGATCG
CCCACTGCGCCGAGACCCACTCCAAGGAGGGCGACTCCTGCTCGAAGGCC
TACCACGCCGGCATGTGCTTCATGAACTCCAACCTGCAGCTGGTGCAGCA
CAGCGTCAAGGTCTAAAAGCTTTCTAGACCAT
BS15079.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:06:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp99b-RB | 450 | CG7592-PB | 1..450 | 17..466 | 2250 | 100 | Plus |
Obp99b-RA | 450 | CG7592-PA | 1..450 | 17..466 | 2250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:06:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp99b-RB | 586 | CG7592-RB | 52..503 | 16..467 | 2260 | 100 | Plus |
Obp99b-RA | 574 | CG7592-RA | 40..491 | 16..467 | 2260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:06:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29716337..29716788 | 467..16 | 2260 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 01:06:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 7609..7647 | 360..322 | 105 | 74.4 | Minus |
BS15079.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:33:50 Download gff for
BS15079.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99b-RA | 1..450 | 17..466 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:06:31 Download gff for
BS15079.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99b-RA | 15..474 | 6..467 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:45:00 Download gff for
BS15079.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99b-RA | 41..488 | 17..464 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:33:50 Download gff for
BS15079.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99b-RA | 15..474 | 6..467 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:18:30 Download gff for
BS15079.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99b-RA | 41..488 | 17..464 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:18:30 Download gff for
BS15079.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29716340..29716787 | 17..464 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:45:00 Download gff for
BS15079.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25542062..25542509 | 17..464 | 100 | | Minus |
BS15079.pep Sequence
Translation from 16 to 465
> BS15079.pep
MKVLIVLLLGLAFVLADHHHHHHDYVVKTHEDLTNYRTQCVEKVHASEEL
VEKYKKWQYPDDAVTHCYLECIFQKFGFYDTEHGFDVHKIHIQLAGPGVE
VHESDEVHQKIAHCAETHSKEGDSCSKAYHAGMCFMNSNLQLVQHSVKV*
BS15079.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:29:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp99b-PB | 149 | CG7592-PB | 1..149 | 1..149 | 823 | 100 | Plus |
Obp99b-PA | 149 | CG7592-PA | 1..149 | 1..149 | 823 | 100 | Plus |
Obp99a-PB | 142 | CG18111-PB | 5..138 | 3..147 | 290 | 37.9 | Plus |
Obp99a-PA | 142 | CG18111-PA | 5..138 | 3..147 | 290 | 37.9 | Plus |
Obp44a-PB | 143 | CG2297-PB | 7..141 | 3..148 | 216 | 34.9 | Plus |