Clone Sequence Records
BS15087.complete Sequence
2669 bp assembled on 2009-12-07
GenBank Submission: KX804295
> BS15087.complete
GAAGTTATCAGTCGACATGGAGGAAAAGACTGATAAAGAGAATCCCATCG
ACACTGAACTAGTCGAATCCCTTTCGCTGCGAAAAGGATACGTCCGCCGG
CCGCGATTGTCCTGGTACTATGCCCCCTCCTTTCTGCTCCTCTGGCTGGC
GCTCTTTTATGCCATCGTGATCCCGCTCTACTACAGACTTCCGGATAGGT
TGACCATATCCGAGGAGTCACACAGGCCAGGAGAATTCGTGGCCGAGCGG
GCACAGCAATATCTGTACACATACGACCGCATTGGACCCAAAGTAACTGG
CAGCTATGCGAACGAGGTGACCACGGTTGAGTTCCTCGTAAACGAAACGG
AAAAGATTCGTGCAGAGATGCGTAGTGACCTCTACGACCTCGAATTGGAT
GTCCAGTCACCAACGGGTGGATACGTATTCAACGACATGGTTAACATGTA
TCAGGGTATTCACAATGTGATCGTCAAGCTGAGTTCCAAGAGCTCCCAGA
GTGAATCGTACCTGTTGCTCAACAGCCATTTCGACTCAAAGCCAGGAAGC
CCAGGCTCCGGTGATGATGGCACAATGGTTGTGGTCATGATGGAGGTCCT
TCGCCAAATGTCTATATCGGAGATCCCATTCGAGCATCCAATTGTGTTCC
TGTTTAACGGAGCTGAGGAGAATCCTCTTCAGGCTTCCCATGGCTTTATT
ACGCAACACAAGTGGGCGGAAAAGTGCAAGGCCTTTATCAACCTCGAAGT
CGGCGGAAGCGGAGGACGTGACTTGTTATTCCAGAGCGGTCCAAATAATC
CTTGGCTAATGAAGTACTACAGGCAACACGCGAAGCACCCGTTCGCGACC
ACAATGGCGGAGGAGATCTTTCAGAGTGGGGTTTTGCCCTCTGATTCAGA
CTTTCGAATTTTCCGAGATTATGGTAACATAGCTGGTTTGGACATTGCCC
AGATCGAGAACGGCTATGTTTACCACACAGCCTTTGATACCTATGAGAAC
GTTCCTGGCCGATCCATTCAGAACTCCGGAAACAATGTCCTTGCTCTGGT
GCGTGCCTACAGCAATGCCAGTGAGTTGTATAACACAGAGAGTGATGATA
GCCATGCCGTCTTCTTTGACTTCCTCGGACTCTTCTTCGTTTACTACACG
GAGACCACGGGCATTGTTGTCAACTGTGTGATTGGAGTGCTAAGTCTGGT
TTTGGTTGGCTGCTCCGTCTGGAGAATGTGCCACCAGTCGGAGGAGGCGT
CTCTTCCTCAGATTTCGATTTGGTTCCTCAGCATTTTGGGACTGCACGTG
GTGGGCTTTCTGTTGTGCATTTGCCTGCCTCTTCTGATGGCAGTTCTATT
CGATGCTGGAGATCGATCTCTCACCTACTTCACCAGCAACTGGTTGGTTT
TTGGACTCTACGTGTGTCCGGCCATCATTGGGCTAGTACTCCCATTGACC
CTCTACTATACCCTGCTGCCCAATGAAAAACTTAGCCAGGCTTACCAGCT
GCAGCTCAGTTTGCACGCTCACCTGGTTGTGCAGGCCCTGTTGGCCCTTA
TACTGACCGCCATGGGTCTACGATCCCAGTACCTGTGCCTCATTTCCATG
ATCTTTTATGGAGGGGCCCTCCTGATTAACCTAGTAAGCACGCTGCACGA
TCGTGGCTACTATTGGGTGCCGATTGTGATGTTTCTGCAAGTGCTACCGT
TCTCGTACTTCTGCTACTTGTTCTACATGTTCCTCGTGATCTTCATTCCG
GTGCTGGGCAGGAATGGCTATAGTACAAATCCAGACCTTATCGTTGGTCT
ATTGTGCGGCGTTTGCGTCTTCTTTGCTCTTGGATTTGCGGCTCAACTTA
TTAATATGTTCCGGTGGCCAAAGCTCATACTTCTCGGATTGGGTGTAATG
ACCTTTATCTTTTGCATGATAGCCGTCTCAGATGTGGGATTCCCCTACCG
AGCCAAGACGAATGTGATGCGAGCCAACTGCTTGCACACTCGTCGCATTT
TCTACGAGCATGATGGTTCTGTGAGCCGCAGTGATTCCGGTTACTATTTC
AACTACCAGGATAGACGAGCATTTGCCCCACTCGAGGACTCTGCACTTGA
CCTGACCGGATTGGAGCCGGTGGCAAATCGCTGTGATGATTACGTGATGT
GCGGCATTCCGTGCTTCTACTACAGCTGGTGCAAGTGGCGCCAGTGGGAT
GGATGGCTGCCCCGCGAATCGGAGGTGATTTTACCCGGTGAACTTACCCT
GGACTTTCTGGGATATACGGTGCTCGAGTCCGGAACAGTAGCTCGTTACG
AATTCGAGTTGGCCGGTCCGCCCCACATGAATTTGTTTATCCAGCCGGTG
GGATCCGCCAAGGTCGACGACTGGTCATTTGTGAGGAAAATGCTGGACGA
ACCAGAGGAGTTCCAACCGCCGTACCAGATCTTCCATTCGTATGGAACCG
ATAATACCTCCTTGAAGTTCTTCATTGATATGGAGAAACCTGATGGTATT
TTCGATACTCCCACCTTGGAACTCGCAGCTGTGGGACACTGGGTCAGCTT
CGAGTACGAAAGGGATGCAGAGGCTAAAGATTTTGTGGCCGCCTTCCCCG
ACTTTGTCCACGTCATGGAATGGCCATCTATATTTAAGCGATATATTTTT
TAGAAGCTTTCTAGACCAT
BS15087.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:59:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30043-RA | 2637 | CG30043-PA | 1..2637 | 17..2653 | 13185 | 100 | Plus |
| CG30049-RA | 2637 | CG30049-PA | 97..905 | 113..921 | 835 | 73.5 | Plus |
| CG30047-RA | 2640 | CG30047-PA | 424..882 | 437..895 | 780 | 78 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:59:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30043-RA | 3082 | CG30043-RA | 64..2701 | 16..2653 | 13190 | 100 | Plus |
| CG30049-RA | 2796 | CG30049-RA | 141..949 | 113..921 | 835 | 73.5 | Plus |
| CG30047-RA | 2809 | CG30047-RA | 472..930 | 437..895 | 780 | 78 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:59:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12362115..12362784 | 1984..2653 | 3350 | 100 | Plus |
| 2R | 25286936 | 2R | 12359584..12360101 | 38..555 | 2590 | 100 | Plus |
| 2R | 25286936 | 2R | 12360987..12361373 | 1089..1475 | 1935 | 100 | Plus |
| 2R | 25286936 | 2R | 12364758..12365140 | 1093..1475 | 1210 | 87.7 | Plus |
| 2R | 25286936 | 2R | 12361674..12361860 | 1655..1841 | 935 | 100 | Plus |
| 2R | 25286936 | 2R | 12361436..12361617 | 1475..1656 | 910 | 100 | Plus |
| 2R | 25286936 | 2R | 12360153..12360330 | 553..730 | 890 | 100 | Plus |
| 2R | 25286936 | 2R | 12360778..12360933 | 935..1090 | 780 | 100 | Plus |
| 2R | 25286936 | 2R | 12361917..12362061 | 1840..1984 | 725 | 100 | Plus |
| 2R | 25286936 | 2R | 12360596..12360720 | 813..937 | 625 | 100 | Plus |
| 2R | 25286936 | 2R | 12352495..12352672 | 553..730 | 470 | 84.3 | Plus |
| 2R | 25286936 | 2R | 12360384..12360468 | 730..814 | 425 | 100 | Plus |
| 2R | 25286936 | 2R | 12363481..12363930 | 106..555 | 375 | 72.2 | Plus |
| 2R | 25286936 | 2R | 12365681..12365814 | 1840..1973 | 325 | 82.8 | Plus |
| 2R | 25286936 | 2R | 12356367..12356532 | 552..717 | 320 | 79.5 | Plus |
| 2R | 25286936 | 2R | 12355870..12356115 | 113..358 | 285 | 74.4 | Plus |
| 2R | 25286936 | 2R | 19377593..19377688 | 635..730 | 240 | 83.3 | Plus |
| 2R | 25286936 | 2R | 19382355..19382451 | 634..730 | 215 | 81.4 | Plus |
| 2R | 25286936 | 2R | 12363983..12364147 | 553..717 | 210 | 75.2 | Plus |
| 2R | 25286936 | 2R | 12367926..12368032 | 437..543 | 205 | 79.4 | Plus |
| 2R | 25286936 | 2R | 12354571..12354643 | 1990..2062 | 185 | 83.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:59:21 has no hits.
BS15087.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:44:03 Download gff for
BS15087.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30043-RA | 48..2684 | 17..2653 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:03:02 Download gff for
BS15087.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30043-RA | 65..2701 | 17..2653 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:07:32 Download gff for
BS15087.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30043-RA | 48..2684 | 17..2653 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:01:23 Download gff for
BS15087.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30043-RA | 65..2701 | 17..2653 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:01:23 Download gff for
BS15087.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12361918..12362061 | 1841..1984 | 100 | -> | Plus |
| 2R | 12359500..12359520 | 17..37 | 100 | -> | Plus |
| 2R | 12359584..12360100 | 38..554 | 100 | -> | Plus |
| 2R | 12360155..12360329 | 555..729 | 100 | -> | Plus |
| 2R | 12360384..12360468 | 730..814 | 100 | -> | Plus |
| 2R | 12360598..12360718 | 815..935 | 100 | -> | Plus |
| 2R | 12360779..12360933 | 936..1090 | 100 | -> | Plus |
| 2R | 12360989..12361372 | 1091..1474 | 100 | -> | Plus |
| 2R | 12361436..12361616 | 1475..1655 | 100 | -> | Plus |
| 2R | 12361675..12361859 | 1656..1840 | 100 | -> | Plus |
| 2R | 12362116..12362784 | 1985..2653 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:03:02 Download gff for
BS15087.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8247660..8247834 | 555..729 | 100 | -> | Plus |
| arm_2R | 8247889..8247973 | 730..814 | 100 | -> | Plus |
| arm_2R | 8248103..8248223 | 815..935 | 100 | -> | Plus |
| arm_2R | 8248284..8248438 | 936..1090 | 100 | -> | Plus |
| arm_2R | 8248941..8249121 | 1475..1655 | 100 | -> | Plus |
| arm_2R | 8248494..8248877 | 1091..1474 | 100 | -> | Plus |
| arm_2R | 8247005..8247025 | 17..37 | 100 | -> | Plus |
| arm_2R | 8247089..8247605 | 38..554 | 100 | -> | Plus |
| arm_2R | 8249180..8249364 | 1656..1840 | 100 | -> | Plus |
| arm_2R | 8249423..8249566 | 1841..1984 | 100 | -> | Plus |
| arm_2R | 8249621..8250289 | 1985..2653 | 100 | | Plus |
BS15087.3prime Sequence
838 bp (760 high quality bases) assembled on 2006-10-23
> BS15087.3prime
ATGGTCTAGAAAGCTTCTAAAAAATATATCGCTTAAATATAGATGGCCAT
TCCATGACGTGGACAAAGTCGGGGAAGGCGGCCACAAAATCTTTAGCCTC
TGCATCCCTTTCGTACTCGAAGCTGACCCAGTGTCCCACAGCTGCGAGTT
CCAAGGTGGGAGTATCGAAAATACCATCAGGTTTCTCCATATCAATGAAG
AACTTCAAGGAGGTATTATCGGTTCCATACGAATGGAAGATCTGGTACGG
CGGTTGGAACTCCTCTGGTTCGTCCAGCATTTTCCTCACAAATGACCAGT
CGTCGACCTTGGCGGATCCCACCGGCTGGATAAACAAATTCATGTGGGGC
GGACCGGCCAACTCGAATTCGTAACGAGCTACTGTTCCGGACTCGAGCAC
CGTATATCCCAGAAAGTCCAGGGTAAGTTCACCGGGTAAAATCACCTCCG
ATTCGCGGGGCAGCCATCCATCCCACTGGCGCCACTTGCACCAGCTGTAG
TAGAAGCACGGAATGCCGCACATCACGTAATCATCACAGCGATTTGCCAC
CGGCTCCAATCCGGTCAGGTCAAGTGCAGAGTCCTCGAGTGGGGCAAATG
CTCGTCTATCCTGGTAGTTGAAATAGTAACCGGAATCACTGCGGCTCACA
GAACCATCATGCTCGTAGAAAATGCGACGAGTGTGCAAGCAGTTGGCTCG
CATCACATTCGTCTTGGCTCGGTAGGGGAATCCCACATCTGAGACGGCTA
TCATGCAAAAGATAAAGGTCATTACACCCAATCCGAGAAGTATGAGCTTT
GGCCACCGGAACATATTTATAAGTTGAGCCGCAAATCC
BS15087.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30043-PA | 2637 | CG30043-RA | 1816..2637 | 838..17 | 4085 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:23:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30043-RA | 3082 | CG30043-RA | 1880..2701 | 838..17 | 4095 | 99.9 | Minus |
| CG30047-RA | 2809 | CG30047-RA | 1867..2097 | 838..608 | 285 | 74.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:23:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12362115..12362784 | 686..17 | 3350 | 100 | Minus |
| 2R | 25286936 | 2R | 12361917..12362061 | 830..686 | 710 | 99.3 | Minus |
| 2R | 25286936 | 2R | 12365681..12365814 | 830..697 | 325 | 82.8 | Minus |
| 2R | 25286936 | 2R | 12354571..12354643 | 680..608 | 185 | 83.6 | Minus |
Blast to na_te.dros performed on 2015-02-10 16:23:40 has no hits.
BS15087.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:43 Download gff for
BS15087.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30043-PA | 1816..2637 | 17..838 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:50:01 Download gff for
BS15087.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30043-PA | 1816..2637 | 17..838 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 02:39:33 Download gff for
BS15087.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30043-RA | 1880..2706 | 10..838 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:31:33 Download gff for
BS15087.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30043-RA | 1880..2706 | 10..838 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:31:33 Download gff for
BS15087.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12361917..12362061 | 686..830 | 99 | -> | Minus |
| 2R | 12362116..12362789 | 10..685 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 02:39:33 Download gff for
BS15087.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8249422..8249566 | 686..830 | 99 | -> | Minus |
| arm_2R | 8249621..8250294 | 10..685 | 99 | | Minus |
BS15087.5prime Sequence
904 bp (760 high quality bases) assembled on 2006-10-23
> BS15087.5prime
GAAGTTATCAGTCGACATGGAGGAAAAGACTGATAAAGAGAATCCCATCG
ACACTGAACTAGTCGAATCCCTTTCGCTGCGAAAAGGATACGTCCGCCGG
CCGCGATTGTCCTGGTACTATGCCCCCTCCTTTCTGCTCCTCTGGCTGGC
GCTCTTTTATGCCATCGTGATCCCGCTCTACTACAGACTTCCGGATAGGT
TGACCATATCCGAGGAGTCACACAGGCCAGGAGAATTCGTGGCCGAGCGG
GCACAGCAATATCTGTACACATACGACCGCATTGGACCCAAAGTAACTGG
CAGCTATGCGAACGAGGTGACCACGGTTGAGTTCCTCGTAAACGAAACGG
AAAAGATTCGTGCAGAGATGCGTAGTGACCTCTACGACCTCGAATTGGAT
GTCCAGTCACCAACGGGTGGATACGTATTCAACGACATGGTTAACATGTA
TCAGGGTATTCACAATGTGATCGTCAAGCTGAGTTCCAAGAGCTCCCAGA
GTGAATCGTACCTGTTGCTCAACAGCCATTTCGACTCAAAGCCAGGAAGC
CCAGGCTCCGGTGATGATGGCACAATGGTTGTGGTCATGATGGAGGTCCT
TCGCCAAATGTCTATATCGGAGATCCCATTCGAGCATCCAATTGTGTTCC
TGTTTAACGGAGCTGAGGAGAATCCTCTTCAGGCTTCCCATGGCTTTATT
ACGCAACACAAGTGGGCGGAAAAGTGCAAGGCCTTTATCAACCTCGAAGT
CGGCGGAAGCGGAGGACGTGACTTGTTATTCCAGAGCGGTCCAAATAATC
CTTGGCTAATGAAGTACTACAGGCAACACGCGAAGCACCCGTTCGCGACC
ACAATGGCGGAGGAGATCTTTCAGAGTGGGGGTTTGCCCTCTGATTCAAC
TTTC
BS15087.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30043-PA | 2637 | CG30043-RA | 1..882 | 17..898 | 4385 | 99.8 | Plus |
| CG33013-PB | 1590 | CG33013-RB | 83..135 | 519..571 | 165 | 92.4 | Plus |
| CG30047-PA | 2640 | CG30047-RA | 601..663 | 614..676 | 140 | 88.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:36:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30043-RA | 3082 | CG30043-RA | 64..953 | 16..904 | 4410 | 99.8 | Plus |
| CG30047-RA | 2809 | CG30047-RA | 472..909 | 437..874 | 780 | 79.1 | Plus |
| CG30049-RA | 2796 | CG30049-RA | 141..902 | 113..874 | 770 | 74.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:36:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12359584..12360101 | 38..555 | 2590 | 100 | Plus |
| 2R | 25286936 | 2R | 12360153..12360330 | 553..730 | 890 | 100 | Plus |
| 2R | 25286936 | 2R | 12352495..12352672 | 553..730 | 470 | 84.3 | Plus |
| 2R | 25286936 | 2R | 12360384..12360468 | 730..814 | 425 | 100 | Plus |
| 2R | 25286936 | 2R | 12360596..12360681 | 813..898 | 415 | 98.8 | Plus |
| 2R | 25286936 | 2R | 12363481..12363930 | 106..555 | 375 | 72.2 | Plus |
| 2R | 25286936 | 2R | 12356367..12356532 | 552..717 | 320 | 79.5 | Plus |
| 2R | 25286936 | 2R | 12355870..12356115 | 113..358 | 285 | 74.4 | Plus |
| 2R | 25286936 | 2R | 19377593..19377688 | 635..730 | 240 | 83.3 | Plus |
| 2R | 25286936 | 2R | 19382355..19382451 | 634..730 | 215 | 81.4 | Plus |
| 2R | 25286936 | 2R | 12363983..12364147 | 553..717 | 210 | 75.2 | Plus |
| 2R | 25286936 | 2R | 12367926..12368032 | 437..543 | 205 | 79.4 | Plus |
Blast to na_te.dros performed on 2015-02-11 04:36:33 has no hits.
BS15087.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:44 Download gff for
BS15087.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30043-PA | 1..889 | 17..904 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:50:02 Download gff for
BS15087.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30043-PA | 1..889 | 17..904 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:37:36 Download gff for
BS15087.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30043-RA | 55..953 | 9..904 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 06:39:22 Download gff for
BS15087.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30043-RA | 55..953 | 9..904 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 06:39:22 Download gff for
BS15087.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12360598..12360688 | 815..904 | 97 | | Plus |
| 2R | 12359584..12360100 | 38..554 | 100 | -> | Plus |
| 2R | 12360155..12360329 | 555..729 | 100 | -> | Plus |
| 2R | 12360384..12360468 | 730..814 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:37:36 Download gff for
BS15087.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8247089..8247605 | 38..554 | 100 | -> | Plus |
| arm_2R | 8247660..8247834 | 555..729 | 100 | -> | Plus |
| arm_2R | 8247889..8247973 | 730..814 | 100 | -> | Plus |
| arm_2R | 8248103..8248193 | 815..904 | 97 | | Plus |
BS15087.pep Sequence
Translation from 16 to 2652
> BS15087.pep
MEEKTDKENPIDTELVESLSLRKGYVRRPRLSWYYAPSFLLLWLALFYAI
VIPLYYRLPDRLTISEESHRPGEFVAERAQQYLYTYDRIGPKVTGSYANE
VTTVEFLVNETEKIRAEMRSDLYDLELDVQSPTGGYVFNDMVNMYQGIHN
VIVKLSSKSSQSESYLLLNSHFDSKPGSPGSGDDGTMVVVMMEVLRQMSI
SEIPFEHPIVFLFNGAEENPLQASHGFITQHKWAEKCKAFINLEVGGSGG
RDLLFQSGPNNPWLMKYYRQHAKHPFATTMAEEIFQSGVLPSDSDFRIFR
DYGNIAGLDIAQIENGYVYHTAFDTYENVPGRSIQNSGNNVLALVRAYSN
ASELYNTESDDSHAVFFDFLGLFFVYYTETTGIVVNCVIGVLSLVLVGCS
VWRMCHQSEEASLPQISIWFLSILGLHVVGFLLCICLPLLMAVLFDAGDR
SLTYFTSNWLVFGLYVCPAIIGLVLPLTLYYTLLPNEKLSQAYQLQLSLH
AHLVVQALLALILTAMGLRSQYLCLISMIFYGGALLINLVSTLHDRGYYW
VPIVMFLQVLPFSYFCYLFYMFLVIFIPVLGRNGYSTNPDLIVGLLCGVC
VFFALGFAAQLINMFRWPKLILLGLGVMTFIFCMIAVSDVGFPYRAKTNV
MRANCLHTRRIFYEHDGSVSRSDSGYYFNYQDRRAFAPLEDSALDLTGLE
PVANRCDDYVMCGIPCFYYSWCKWRQWDGWLPRESEVILPGELTLDFLGY
TVLESGTVARYEFELAGPPHMNLFIQPVGSAKVDDWSFVRKMLDEPEEFQ
PPYQIFHSYGTDNTSLKFFIDMEKPDGIFDTPTLELAAVGHWVSFEYERD
AEAKDFVAAFPDFVHVMEWPSIFKRYIF*
BS15087.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:56:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30043-PA | 878 | CG30043-PA | 1..878 | 1..878 | 4669 | 100 | Plus |
| CG30047-PA | 879 | CG30047-PA | 15..879 | 12..878 | 3170 | 67.1 | Plus |
| CG30049-PA | 878 | CG30049-PA | 8..878 | 6..878 | 3038 | 64.6 | Plus |
| CG13160-PB | 875 | CG13160-PB | 26..875 | 26..878 | 2386 | 52.2 | Plus |
| CG13160-PA | 874 | CG13160-PA | 25..874 | 26..878 | 2386 | 52.2 | Plus |
