Clone Sequence Records
BS15090.complete Sequence
1475 bp assembled on 2009-12-07
GenBank Submission: KX802916
> BS15090.complete
GAAGTTATCAGTCGACATGTCGAATGTGTGGGGCAAACTGGTGCTGAAGT
TCTTTAAATATGCGCCCAGCTATGTGGTCTGCCTGTGCTTCCTGCCCTGC
GGCATGATCTTTGGCTATACGATCTGCGCCTTTGTTGCGGAGCGGAACCT
CAACGCTGGACTCATTCACTATGGACCATTGATTCTGGGCGCCTGCTGGG
CGTTGATCACTGCCCTGGCCATGCTGACGGTCAAGTTCGTGAAGAAGTGC
ATCGTCTACTGGCAGCCATGGCTGCTCCTGGCAGCCGGAGTCTTTAATCT
CATAGGCAGCTGCTTCTACTTTGCCGATGGATTTGACCACGTCGGAGCCT
ATATATCGTACTTGGCGCACAGCATGACCTTCGTGGCCGGCTATAGCTTC
CTGCTCACGATCAGCTCCAAGGGCAGCAGGTCGCTGTTCCTCTCGGGCAG
CTGCAGCTGCTACCTGCTGGGCGTGGCGTCCGCCGTCAGCCTGATCGTGG
CCTCCTACAGCCGGAATGTAAAGGAGCTGGCCGGACAGACGGTGACCACG
GAGCAACTGATCGATGGCATCTATGTAAACTTCGCCGGCACCTACTTGAG
TGTGGCGGCCGCCGTGTTGGCCATTCTGGTGGGCCAGAAGGTGCTCCACT
TTCTGGGCACCGTCGACCTGGTGAACAGCATGGACAACGACCTGCGGATC
GCCAACTCGAATGGCAGCATCTTCGAGCAGCGATCGGAGGTCATCAAGCG
ACTGCAGTTCTTCTACGTGACCAAGAACCAGCAGTGGAACATAATGCTAC
TGCTCCTCTTCACGGAGGCCGTGCAGTTCGCCCTGTTCGTGTACTTTGTC
TACTGGTTTGCCCTTAATCCGGCCATCCGGCTGACAGAGTTCTCCGGCAT
CGACGGCATGTTCTGGGTGATCTTTGCGGGCAGCCTGCTGGCCCTCATCT
GCCAGTGGTTCCTGTCGGTGAAGGTCACCTTTGTGGGCTCGCAGGTGGCC
CTCATCTCCTTCACTCTGCTGGCCATGATCCTCTGCAGCGTTACGGACTC
CAGGTGGTCGCTCTGGCTGCTCCTTGTGCTCTTTGGCCTGTCGTACTCGC
AGCAGCAGATTCTCCTGCTGGAGGTCACCCATCTGCGCTTCACCGAATGC
ATCATATGCATCTCGTATGTGCTCAAGTTGATCTGCACCAGCATCGTGTA
CTTCTACTTTGTGGCGGATGCGAAGAACTCCTACTTCTATGCCACCGACT
CGAGCACTCTGATGGCCCAGGGATTCGTCTTTCTCATCATCACCTCGCTG
CTGGCACTCGTGGTGGGCATGAAGGTGCCCCGGACGCATCGCGCCCAGCT
GCTGGAGATCCAGTACGAGGTGTACGGCATCATCTTTATGAAGCACCAGA
TCGAGCAGCTCAACGTCCGTTGGCTGAACGACGGCACCATTCCCACCATC
AACCAGTGAAAGCTTTCTAGACCAT
BS15090.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:40:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7992-RA | 1443 | CG7992-PA | 1..1443 | 17..1459 | 7215 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:40:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7992-RA | 1693 | CG7992-RA | 137..1579 | 17..1459 | 7215 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:40:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19245272..19246396 | 1459..335 | 5625 | 100 | Minus |
| X | 23542271 | X | 19246737..19246995 | 335..77 | 1295 | 100 | Minus |
| X | 23542271 | X | 19247054..19247114 | 77..17 | 305 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:40:21 has no hits.
BS15090.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:16:49 Download gff for
BS15090.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7992-RA | 1..1443 | 17..1459 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:40:23 Download gff for
BS15090.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7992-RA | 106..1547 | 17..1458 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:54:23 Download gff for
BS15090.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7992-RA | 137..1578 | 17..1458 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:45:21 Download gff for
BS15090.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7992-RA | 106..1547 | 17..1458 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:54:11 Download gff for
BS15090.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7992-RA | 137..1578 | 17..1458 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:54:11 Download gff for
BS15090.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19246737..19246994 | 78..335 | 100 | <- | Minus |
| X | 19247054..19247114 | 17..77 | 100 | | Minus |
| X | 19245273..19246395 | 336..1458 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:54:23 Download gff for
BS15090.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19139306..19140428 | 336..1458 | 100 | <- | Minus |
| arm_X | 19140770..19141027 | 78..335 | 100 | <- | Minus |
| arm_X | 19141087..19141147 | 17..77 | 100 | | Minus |
BS15090.3prime Sequence
826 bp (710 high quality bases) assembled on 2006-10-23
> BS15090.3prime
ATGGTCTAGAAAGCTTTCACTGGTTGATGGTGGGAATGGTGCCGTCGTTC
AGCCAACGGACGTTGAGCTGCTCGATCTGGTGCTTCATAAAGATGATGCC
GTACACCTCGTACTGGATCTCCAGCAGCTGGGCGCGATGCGTCCGGGGCA
CCTTCATGCCCACCACGAGTGCCAGCAGCGAGGTGATGATGAGAAAGACG
AATCCCTGGGCCATCAGAGTGCTCGAGTCGGTGGCATAGAAGTAGGAGTT
CTTCGCATCCGCCACAAAGTAGAAGTACACGATGCTGGTGCAGATCAACT
TGAGCACATACGAGATGCATATGATGCATTCGGTGAAGCGCAGATGGGTG
ACCTCCAGCAGGAGAATCTGCTGCTGCGAGTACGACAGGCCAAAGAGCAC
AAGGAGCAGCCAGAGCGACCACCTGGAGTCCGTAACGCTGCAGAGGATCA
TGGCCAGCAGAGTGAAGGAGATGAGGGCCACCTGCGAGCCCACAAAGGTG
ACCTTCACCGACAGGAACCACTGGCAGATGAGGGCCAGCAGGCTGCCCGC
AAAGATCACCCAGAACATGCCGTCGATGCCGGAGAACTCTGTCAGCCGGA
TGGCCGGATTAAGGGCAAACCAGTAGACAAAGTACACGAACAGGGCGAAC
TGCACGGCCTCCGTGAAGAGGAGCAGTAGCATTATGTTCCACTGCTGGTT
CTTGGTCACGTAGAAGAACTGCAGTCGCTTGATGACCTCCGATCGCTGCT
CGAAGATGCTGCCATTCGAGTTGGCGATCCCGCAGGTCGTTGTCCATGCT
GTTCCCCAGGTCGACGGTGCCCAGAA
BS15090.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:13:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7992-PA | 1443 | CG7992-RA | 680..1443 | 780..17 | 3820 | 100 | Minus |
| CG7992-PA | 1443 | CG7992-RA | 635..681 | 826..780 | 210 | 97.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:15:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7992-RA | 1693 | CG7992-RA | 771..1579 | 826..17 | 4010 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:15:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19245272..19246080 | 17..826 | 3985 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-10 22:15:44 has no hits.
BS15090.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:45 Download gff for
BS15090.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7992-PA | 637..1443 | 17..824 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:50:03 Download gff for
BS15090.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7992-PA | 637..1443 | 17..824 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 11:20:25 Download gff for
BS15090.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7992-RA | 771..1581 | 13..826 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:05:12 Download gff for
BS15090.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7992-RA | 771..1581 | 13..826 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:05:12 Download gff for
BS15090.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19245270..19246080 | 13..826 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 11:20:25 Download gff for
BS15090.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19139303..19140113 | 13..826 | 99 | | Plus |
BS15090.5prime Sequence
770 bp (742 high quality bases) assembled on 2006-10-23
> BS15090.5prime
GAAGTTATCAGTCGACATGTCGAATGTGTGGGGCAAACTGGTGCTGAAGT
TCTTTAAATATGCGCCCAGCTATGTGGTCTGCCTGTGCTTCCTGCCCTGC
GGCATGATCTTTGGCTATACGATCTGCGCCTTTGTTGCGGAGCGGAACCT
CAACGCTGGACTCATTCACTATGGACCATTGATTCTGGGCGCCTGCTGGG
CGTTGATCACTGCCCTGGCCATGCTGACGGTCAAGTTCGTGAAGAAGTGC
ATCGTCTACTGGCAGCCATGGCTGCTCCTGGCAGCCGGAGTCTTTAATCT
CATAGGCAGCTGCTTCTACTTTGCCGATGGATTTGACCACGTCGGAGCCT
ATATATCGTACTTGGCGCACAGCATGACCTTCGTGGCCGGCTATAGCTTC
CTGCTCACGATCAGCTCCAAGGGCAGCAGGTCGCTGTTCCTCTCGGGCAG
CTGCAGCTGCTACCTGCTGGGCGTGGCGTCCGCCGTCAGCCTGATCGTGG
CCTCCTACAGCCGGAATGTAAAGGAGCTGGCCGGACAGACGGTGACCACG
GAGCAACTGATCGATGGCATCTATGTAAACTTCGCCGGCACCTACTTGAG
TGTGGCGGCCGCCGTGTTGGCCATTCTGGTGGGCCAGAAGGTGCTCCACT
TTCTGGGCACCGTCGACCTGGTGAACAGCATGGACAACGACCTGCGGATC
GCCAACTCGAATGGCAGCATCTTCAAGCAGCGATCGGAGGTCATCAAGCG
ACTGCAGTTCTTCTACGTGA
BS15090.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:14:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7992-PA | 1443 | CG7992-RA | 1..754 | 17..770 | 3745 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:15:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7992-RA | 1693 | CG7992-RA | 137..890 | 17..770 | 3755 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:15:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19245961..19246396 | 770..335 | 2165 | 99.8 | Minus |
| X | 23542271 | X | 19246737..19246995 | 335..77 | 1295 | 100 | Minus |
| X | 23542271 | X | 19247054..19247114 | 77..17 | 305 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 06:15:55 has no hits.
BS15090.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:46 Download gff for
BS15090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7992-PA | 1..753 | 17..769 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:50:05 Download gff for
BS15090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7992-PA | 1..753 | 17..769 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:53:14 Download gff for
BS15090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7992-RA | 137..889 | 17..769 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:20:18 Download gff for
BS15090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7992-RA | 137..889 | 17..769 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:20:18 Download gff for
BS15090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19245962..19246395 | 336..769 | 99 | <- | Minus |
| X | 19246737..19246994 | 78..335 | 100 | <- | Minus |
| X | 19247054..19247114 | 17..77 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:53:14 Download gff for
BS15090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19139995..19140428 | 336..769 | 99 | <- | Minus |
| arm_X | 19140770..19141027 | 78..335 | 100 | <- | Minus |
| arm_X | 19141087..19141147 | 17..77 | 100 | | Minus |
BS15090.pep Sequence
Translation from 16 to 1458
> BS15090.pep
MSNVWGKLVLKFFKYAPSYVVCLCFLPCGMIFGYTICAFVAERNLNAGLI
HYGPLILGACWALITALAMLTVKFVKKCIVYWQPWLLLAAGVFNLIGSCF
YFADGFDHVGAYISYLAHSMTFVAGYSFLLTISSKGSRSLFLSGSCSCYL
LGVASAVSLIVASYSRNVKELAGQTVTTEQLIDGIYVNFAGTYLSVAAAV
LAILVGQKVLHFLGTVDLVNSMDNDLRIANSNGSIFEQRSEVIKRLQFFY
VTKNQQWNIMLLLLFTEAVQFALFVYFVYWFALNPAIRLTEFSGIDGMFW
VIFAGSLLALICQWFLSVKVTFVGSQVALISFTLLAMILCSVTDSRWSLW
LLLVLFGLSYSQQQILLLEVTHLRFTECIICISYVLKLICTSIVYFYFVA
DAKNSYFYATDSSTLMAQGFVFLIITSLLALVVGMKVPRTHRAQLLEIQY
EVYGIIFMKHQIEQLNVRWLNDGTIPTINQ*
BS15090.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:01:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7992-PA | 480 | CG7992-PA | 1..480 | 1..480 | 2472 | 100 | Plus |
