Clone BS15092 Report

Search the DGRC for BS15092

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:150
Well:92
Vector:pDNR-Dual
Associated Gene/TranscriptCG8791-RA
Protein status:BS15092.pep: full length peptide match
Sequenced Size:1466

Clone Sequence Records

BS15092.complete Sequence

1466 bp assembled on 2009-12-07

GenBank Submission: KX805710

> BS15092.complete
GAAGTTATCAGTCGACATGGGTTTCGAACCCTCTGAGGATAAGGCAAGGC
CTGGAGGTCTTGGCGTGCGACACTGGCAGGCGGTTCTTCTGTTCGTGGGC
ATGATGATCAACTACTTCCAGCGGGTGAACATCTCGGCTGCCATTGTGCC
CATGACGCAGTCCACCGCGGGGGCTCCGTTCTACACCTGGGATACGTCGG
ACAAGTCCCTGATCCTCAGCAGCTTTTTCTGGGGCTATGTGGTCTCCCAG
GTGCCGGCAGGACTGCTTGCCAAGCGATTTGGAGCCAAGTTAGTGCTGGG
CCTGGCGACTGCAATCGGAGGTATTTTGTGCTTCTTCCATCCCATTGCAG
CCAAAAGCGGGTGGCAGAGTATCTGCGTTCTGCGCGTTCTTACCGGTCTG
GTCCAGGGCACGGTTTATCCGTGTGTCCACACGCTGCTGGCTAAGTGGGT
GCCACGCACTGAGCGGGGACTGCTAACCACTGGCGTTTATTCGGGAGCAC
AGTTCGGAACGGCTGTCATCCTGGTCACCAGTGGCTTCATCTTCGAATCC
AGCATGGGTTGGCCAGGGTTGTTCTACCTTTCCGGAGGTCTCAGCCTCGC
TTGGGCGCTGCTTTTCTTTTGGCAGGCCGCCAATGAACCGGTTACAGCCA
GCAGGATCAGCAAAGGCGAGGTGGAGTATATCGAAAGCCTTACGGGCAGC
AACAGCTCCAGTCAGTCTATGCCTGTGCCCTGGATGTCGATCTTTAGGTC
GCCAGCCTTTTACGGTCTGCTGGCAGCCCATTGTGGATTCACCTGGGGTT
TCTACACGCTGCTCACCGAAATGCCCACTTACATGAGCATGGTTCTGCAG
CTAAATGTCAAGTCCAATGCCTTCCTCTCCTCGCTGCCGTACTTTGCTAT
GGGCCTGCTCTGCTTTGTGGTCAGTCCCATATCGGATTTGCTTATCAACA
GAGGCACTATATCGATCACCACGGCTCGAAAGCTGTTTAATTCGATTGGA
CAGTGGGGACCGATGGCTTGTTTGATTGGACTGGGCTACATGACAGCCGA
TGAGAAAACGTGGGCCATTCTTCTGCTGACACTGGCAGTGGGCATCAATG
CGGGCTGTTCCTGTGGATATCTGATCAATCACATCGACCTGTCGCCCAAC
TTTGCCGGCCCAATGATGGGAGTCACCAATGGGATTGCGGGAGTGACCTC
CATAATAGCTCCTTTGGTGGTGGGAGCGATCGTATCGGATGAGGAGGATC
CCAGCCAGTGGCGCATGGTATTCTTTATTACAGGAGGTATTTACCTAGTG
TGCAACACAATTTTTGTGATATTTGGCAAGGCCACTATTCAGATTTGGAA
CGAACCTCCATCGACGTCTAGCACGATGACGCTCCGCAGCCACCAGGAAA
ACGATTCAAAGTCCATTGTTCCCACGTCAGATAAAGACATTCGGTACTAA
AAGCTTTCTAGACCAT

BS15092.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:23:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG8791-RA 1434 CG8791-PA 1..1434 17..1450 7170 100 Plus
CG8791-RB 1350 CG8791-PB 1..1350 101..1450 6750 100 Plus
CG8791-RC 1350 CG8791-PC 1..1350 101..1450 6750 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:23:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG8791-RA 1840 CG8791-RA 95..1528 17..1450 7170 100 Plus
CG8791-RB 2292 CG8791-RB 581..1980 51..1450 7000 100 Plus
CG8791-RC 1811 CG8791-RC 100..1499 51..1450 7000 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:23:49
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7928874..7929610 714..1450 3685 100 Plus
2R 25286936 2R 7928357..7928813 259..715 2285 100 Plus
2R 25286936 2R 7928086..7928296 51..261 1055 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:23:50 has no hits.

BS15092.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:49:15 Download gff for BS15092.complete
Subject Subject Range Query Range Percent Splice Strand
CG8791-RA 71..1502 17..1448 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:13:13 Download gff for BS15092.complete
Subject Subject Range Query Range Percent Splice Strand
CG8791-RA 95..1526 17..1448 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:25:46 Download gff for BS15092.complete
Subject Subject Range Query Range Percent Splice Strand
CG8791-RA 71..1502 17..1448 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:10:32 Download gff for BS15092.complete
Subject Subject Range Query Range Percent Splice Strand
CG8791-RA 95..1526 17..1448 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:10:32 Download gff for BS15092.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7926747..7926780 17..50 100 -> Plus
2R 7928086..7928295 51..260 100 -> Plus
2R 7928359..7928813 261..715 100 -> Plus
2R 7928876..7929608 716..1448 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:13:13 Download gff for BS15092.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3814252..3814285 17..50 100 -> Plus
arm_2R 3815591..3815800 51..260 100 -> Plus
arm_2R 3815864..3816318 261..715 100 -> Plus
arm_2R 3816381..3817113 716..1448 100   Plus

BS15092.3prime Sequence

775 bp (719 high quality bases) assembled on 2006-10-23

> BS15092.3prime
ATGGTCTAGAAAGCTTTTACTACCGAATGTCTTTATCTGACGTGGGAACA
ATGGACTTTGAATCGTTTTCCTGGTGGCTGCGGAGCGTCATCGTGCTAGA
CGTCGATGGAGGTTCGTTCCAAATCTGAATAGTGGCCTTGCCAAATATCA
CAAAAATTGTGTTGCACACTAGGTAAATACCTCCTGTAATAAAGAATACC
ATGCGCCACTGGCTGGGATCCTCCTCATCCGATACGATCGCTCCCACCAC
CAAAGGAGCTATTATGGAGGTCACTCCCGCAATCCCATTGGTGACTCCCA
TCATTGGGCCGGCAAAGTTGGGCGACAGGTCGATGTGATTGATCAGATAT
CCACAGGAACAGCCCGCATTGATGCCCACTGCCAGTGTCAGCAGAAGAAT
GGCCCACGTTTTCTCATCGGCTGTCATGTAGCCCAGTCCAATCAAACAAG
CCATCGGTCCCCACTGTCCAATCGAATTAAACAGCTTTCGAGCCGTGGTG
ATCGATATAGTGCCTCTGTTGATAAGCAAATCCGATATGGGACTGACCAC
AAAGCAGAGCAGGCCCATAGCAAAGTACGGCAGCGAGGAGAGGAAGGCAT
TGGACTTGACATTTAGCTGCAGAACCATGCTCATGTAAGTGGGCATTTCG
GTGAGCAGCGTGTAGAAACCCCAGGTGAATCCACAATGGGCTGCCAGCAG
ACCGTAAAAGGCTGGCGACCTAAAGATCGACATCCAGGGCACAGGCATAG
ACTGACTGGAGCTGTTGCTGCCCGT

BS15092.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:14:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG8791-PA 1434 CG8791-RA 676..1430 775..21 3775 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:04:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG8791-RB 2292 CG8791-RB 1222..1980 775..17 3780 99.9 Minus
CG8791-RC 1811 CG8791-RC 741..1499 775..17 3780 99.9 Minus
CG8791-RA 1840 CG8791-RA 770..1528 775..17 3780 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:04:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7928874..7929610 753..17 3670 99.9 Minus
Blast to na_te.dros performed on 2015-02-11 23:04:35 has no hits.

BS15092.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:47 Download gff for BS15092.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8791-PA 676..1434 17..775 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:50:06 Download gff for BS15092.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8791-PA 676..1434 17..775 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:35:05 Download gff for BS15092.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8791-RA 770..1534 9..775 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:26:00 Download gff for BS15092.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8791-RA 770..1534 9..775 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:26:00 Download gff for BS15092.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 7928790..7928813 752..775 100 -> Minus
2R 7928876..7929606 21..751 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:35:05 Download gff for BS15092.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3816295..3816318 752..775 100 -> Minus
arm_2R 3816381..3817111 21..751 100 <- Minus

BS15092.5prime Sequence

927 bp (771 high quality bases) assembled on 2006-10-23

> BS15092.5prime
GAAGTTATCCGTCGACATGGGTTTCGAACCCTCTGAGGATAAGGCAAGGC
CTGGAGGTCTTGGCGTGCGACACTGGCAGGCGGTTCTTCTGTTCGTGGGC
ATGATGATCAACTACTTCCAGCGGGTGAACATCTCGGCTGCCATTGTGCC
CATGACGCAGTCCACCGCGGGGGCTCCGTTCTACACCTGGGATACGTCGG
ACAAGTCCCTGATCCTCAGCAGCTTTTTCTGGGGCTATGTGGTCTCCCAG
GTGCCGGCAGGACTGCTTGCCAAGCGATTTGGAGCCAAGTTAGTGCTGGG
CCTGGCGACTGCAATCGGAGGTATTTTGTGCTTCTTCCATCCCATTGCAG
CCAAAAGCGGGTGGCAGAGTATCTGCGTTCTGCGCGTTCTTACCGGTCTG
GTCCAGGGCACGGTTTATCCGTGTGTCCACACGCTGCTGGCTAAGTGGGT
GCCACGCACTGAGCGGGGACTGCTAACCACTGGCGTTTATTCGGGAGCAC
AGTTCGGAACGGCTGTCATCCTGGTCACCAGTGGCTTCATCTTCGAATCC
AGCATGGGTTGGCCAGGGTTGTTCTACCTTTCCGGAGGTCTCAGCCTCGC
TTGGGCGCTGCTTTTCTTTTGGCAGGCCGCCAATGAACCGGTTACAGCCA
GCAGGATCAGCAAAGGCGAGGTGGAGTATATCGAAAGCCTTACGGGCAGC
AACAGCTCCAGTCAGTCTATGCCTGTGCCCTGGATGTCGATCTTTAGGTC
GCCAGCCTTTTACGGTCTGCTGGCAGCCCATTGTGGATTCACCTGGGGTT
TCTACACGCTGCTCACCGAAATGCCCACTTACATGAGCATGGTTCTGCAG
CTAAATGTCAAGTCCAATGCCTTCCTCTCCTCGCTGCCGTACTTTGCTAT
GGGGCTGCTCTGCTTTGTGGTCAGTCC

BS15092.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:14:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG8791-PA 1434 CG8791-RA 1..911 17..927 4530 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:49:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG8791-RA 1840 CG8791-RA 95..1005 17..927 4540 99.9 Plus
CG8791-RB 2292 CG8791-RB 581..1457 51..927 4370 99.9 Plus
CG8791-RC 1811 CG8791-RC 100..976 51..927 4370 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:49:48
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7928357..7928813 259..715 2285 100 Plus
2R 25286936 2R 7928086..7928296 51..261 1055 100 Plus
2R 25286936 2R 7928874..7929087 714..927 1055 99.5 Plus
Blast to na_te.dros performed on 2015-02-12 23:49:50 has no hits.

BS15092.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:48 Download gff for BS15092.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8791-PA 1..911 17..927 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:50:07 Download gff for BS15092.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8791-PA 1..911 17..927 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:21:35 Download gff for BS15092.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8791-RA 95..1005 17..927 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:15:38 Download gff for BS15092.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8791-RA 95..1005 17..927 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:15:38 Download gff for BS15092.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 7928876..7929087 716..927 99   Plus
2R 7926748..7926780 18..50 100 -> Plus
2R 7928086..7928295 51..260 100 -> Plus
2R 7928359..7928813 261..715 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:21:35 Download gff for BS15092.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3814253..3814285 18..50 100 -> Plus
arm_2R 3815591..3815800 51..260 100 -> Plus
arm_2R 3815864..3816318 261..715 100 -> Plus
arm_2R 3816381..3816592 716..927 99   Plus

BS15092.pep Sequence

Translation from 16 to 1449

> BS15092.pep
MGFEPSEDKARPGGLGVRHWQAVLLFVGMMINYFQRVNISAAIVPMTQST
AGAPFYTWDTSDKSLILSSFFWGYVVSQVPAGLLAKRFGAKLVLGLATAI
GGILCFFHPIAAKSGWQSICVLRVLTGLVQGTVYPCVHTLLAKWVPRTER
GLLTTGVYSGAQFGTAVILVTSGFIFESSMGWPGLFYLSGGLSLAWALLF
FWQAANEPVTASRISKGEVEYIESLTGSNSSSQSMPVPWMSIFRSPAFYG
LLAAHCGFTWGFYTLLTEMPTYMSMVLQLNVKSNAFLSSLPYFAMGLLCF
VVSPISDLLINRGTISITTARKLFNSIGQWGPMACLIGLGYMTADEKTWA
ILLLTLAVGINAGCSCGYLINHIDLSPNFAGPMMGVTNGIAGVTSIIAPL
VVGAIVSDEEDPSQWRMVFFITGGIYLVCNTIFVIFGKATIQIWNEPPST
SSTMTLRSHQENDSKSIVPTSDKDIRY*

BS15092.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:02:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG8791-PA 477 CG8791-PA 1..477 1..477 2498 100 Plus
CG8791-PB 449 CG8791-PB 1..449 29..477 2346 100 Plus
CG8791-PC 449 CG8791-PC 1..449 29..477 2346 100 Plus
CG15096-PC 491 CG15096-PC 23..477 7..449 1178 50.5 Plus
CG15096-PA 491 CG15096-PA 23..477 7..449 1178 50.5 Plus