Clone Sequence Records
BS15092.complete Sequence
1466 bp assembled on 2009-12-07
GenBank Submission: KX805710
> BS15092.complete
GAAGTTATCAGTCGACATGGGTTTCGAACCCTCTGAGGATAAGGCAAGGC
CTGGAGGTCTTGGCGTGCGACACTGGCAGGCGGTTCTTCTGTTCGTGGGC
ATGATGATCAACTACTTCCAGCGGGTGAACATCTCGGCTGCCATTGTGCC
CATGACGCAGTCCACCGCGGGGGCTCCGTTCTACACCTGGGATACGTCGG
ACAAGTCCCTGATCCTCAGCAGCTTTTTCTGGGGCTATGTGGTCTCCCAG
GTGCCGGCAGGACTGCTTGCCAAGCGATTTGGAGCCAAGTTAGTGCTGGG
CCTGGCGACTGCAATCGGAGGTATTTTGTGCTTCTTCCATCCCATTGCAG
CCAAAAGCGGGTGGCAGAGTATCTGCGTTCTGCGCGTTCTTACCGGTCTG
GTCCAGGGCACGGTTTATCCGTGTGTCCACACGCTGCTGGCTAAGTGGGT
GCCACGCACTGAGCGGGGACTGCTAACCACTGGCGTTTATTCGGGAGCAC
AGTTCGGAACGGCTGTCATCCTGGTCACCAGTGGCTTCATCTTCGAATCC
AGCATGGGTTGGCCAGGGTTGTTCTACCTTTCCGGAGGTCTCAGCCTCGC
TTGGGCGCTGCTTTTCTTTTGGCAGGCCGCCAATGAACCGGTTACAGCCA
GCAGGATCAGCAAAGGCGAGGTGGAGTATATCGAAAGCCTTACGGGCAGC
AACAGCTCCAGTCAGTCTATGCCTGTGCCCTGGATGTCGATCTTTAGGTC
GCCAGCCTTTTACGGTCTGCTGGCAGCCCATTGTGGATTCACCTGGGGTT
TCTACACGCTGCTCACCGAAATGCCCACTTACATGAGCATGGTTCTGCAG
CTAAATGTCAAGTCCAATGCCTTCCTCTCCTCGCTGCCGTACTTTGCTAT
GGGCCTGCTCTGCTTTGTGGTCAGTCCCATATCGGATTTGCTTATCAACA
GAGGCACTATATCGATCACCACGGCTCGAAAGCTGTTTAATTCGATTGGA
CAGTGGGGACCGATGGCTTGTTTGATTGGACTGGGCTACATGACAGCCGA
TGAGAAAACGTGGGCCATTCTTCTGCTGACACTGGCAGTGGGCATCAATG
CGGGCTGTTCCTGTGGATATCTGATCAATCACATCGACCTGTCGCCCAAC
TTTGCCGGCCCAATGATGGGAGTCACCAATGGGATTGCGGGAGTGACCTC
CATAATAGCTCCTTTGGTGGTGGGAGCGATCGTATCGGATGAGGAGGATC
CCAGCCAGTGGCGCATGGTATTCTTTATTACAGGAGGTATTTACCTAGTG
TGCAACACAATTTTTGTGATATTTGGCAAGGCCACTATTCAGATTTGGAA
CGAACCTCCATCGACGTCTAGCACGATGACGCTCCGCAGCCACCAGGAAA
ACGATTCAAAGTCCATTGTTCCCACGTCAGATAAAGACATTCGGTACTAA
AAGCTTTCTAGACCAT
BS15092.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:23:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8791-RA | 1434 | CG8791-PA | 1..1434 | 17..1450 | 7170 | 100 | Plus |
CG8791-RB | 1350 | CG8791-PB | 1..1350 | 101..1450 | 6750 | 100 | Plus |
CG8791-RC | 1350 | CG8791-PC | 1..1350 | 101..1450 | 6750 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:23:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8791-RA | 1840 | CG8791-RA | 95..1528 | 17..1450 | 7170 | 100 | Plus |
CG8791-RB | 2292 | CG8791-RB | 581..1980 | 51..1450 | 7000 | 100 | Plus |
CG8791-RC | 1811 | CG8791-RC | 100..1499 | 51..1450 | 7000 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:23:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7928874..7929610 | 714..1450 | 3685 | 100 | Plus |
2R | 25286936 | 2R | 7928357..7928813 | 259..715 | 2285 | 100 | Plus |
2R | 25286936 | 2R | 7928086..7928296 | 51..261 | 1055 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:23:50 has no hits.
BS15092.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:49:15 Download gff for
BS15092.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-RA | 71..1502 | 17..1448 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:13:13 Download gff for
BS15092.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-RA | 95..1526 | 17..1448 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:25:46 Download gff for
BS15092.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-RA | 71..1502 | 17..1448 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:10:32 Download gff for
BS15092.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-RA | 95..1526 | 17..1448 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:10:32 Download gff for
BS15092.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7926747..7926780 | 17..50 | 100 | -> | Plus |
2R | 7928086..7928295 | 51..260 | 100 | -> | Plus |
2R | 7928359..7928813 | 261..715 | 100 | -> | Plus |
2R | 7928876..7929608 | 716..1448 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:13:13 Download gff for
BS15092.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3814252..3814285 | 17..50 | 100 | -> | Plus |
arm_2R | 3815591..3815800 | 51..260 | 100 | -> | Plus |
arm_2R | 3815864..3816318 | 261..715 | 100 | -> | Plus |
arm_2R | 3816381..3817113 | 716..1448 | 100 | | Plus |
BS15092.3prime Sequence
775 bp (719 high quality bases) assembled on 2006-10-23
> BS15092.3prime
ATGGTCTAGAAAGCTTTTACTACCGAATGTCTTTATCTGACGTGGGAACA
ATGGACTTTGAATCGTTTTCCTGGTGGCTGCGGAGCGTCATCGTGCTAGA
CGTCGATGGAGGTTCGTTCCAAATCTGAATAGTGGCCTTGCCAAATATCA
CAAAAATTGTGTTGCACACTAGGTAAATACCTCCTGTAATAAAGAATACC
ATGCGCCACTGGCTGGGATCCTCCTCATCCGATACGATCGCTCCCACCAC
CAAAGGAGCTATTATGGAGGTCACTCCCGCAATCCCATTGGTGACTCCCA
TCATTGGGCCGGCAAAGTTGGGCGACAGGTCGATGTGATTGATCAGATAT
CCACAGGAACAGCCCGCATTGATGCCCACTGCCAGTGTCAGCAGAAGAAT
GGCCCACGTTTTCTCATCGGCTGTCATGTAGCCCAGTCCAATCAAACAAG
CCATCGGTCCCCACTGTCCAATCGAATTAAACAGCTTTCGAGCCGTGGTG
ATCGATATAGTGCCTCTGTTGATAAGCAAATCCGATATGGGACTGACCAC
AAAGCAGAGCAGGCCCATAGCAAAGTACGGCAGCGAGGAGAGGAAGGCAT
TGGACTTGACATTTAGCTGCAGAACCATGCTCATGTAAGTGGGCATTTCG
GTGAGCAGCGTGTAGAAACCCCAGGTGAATCCACAATGGGCTGCCAGCAG
ACCGTAAAAGGCTGGCGACCTAAAGATCGACATCCAGGGCACAGGCATAG
ACTGACTGGAGCTGTTGCTGCCCGT
BS15092.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:14:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8791-PA | 1434 | CG8791-RA | 676..1430 | 775..21 | 3775 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:04:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8791-RB | 2292 | CG8791-RB | 1222..1980 | 775..17 | 3780 | 99.9 | Minus |
CG8791-RC | 1811 | CG8791-RC | 741..1499 | 775..17 | 3780 | 99.9 | Minus |
CG8791-RA | 1840 | CG8791-RA | 770..1528 | 775..17 | 3780 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:04:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7928874..7929610 | 753..17 | 3670 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-11 23:04:35 has no hits.
BS15092.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:47 Download gff for
BS15092.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-PA | 676..1434 | 17..775 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:50:06 Download gff for
BS15092.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-PA | 676..1434 | 17..775 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:35:05 Download gff for
BS15092.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-RA | 770..1534 | 9..775 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:26:00 Download gff for
BS15092.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-RA | 770..1534 | 9..775 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:26:00 Download gff for
BS15092.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7928790..7928813 | 752..775 | 100 | -> | Minus |
2R | 7928876..7929606 | 21..751 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:35:05 Download gff for
BS15092.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3816295..3816318 | 752..775 | 100 | -> | Minus |
arm_2R | 3816381..3817111 | 21..751 | 100 | <- | Minus |
BS15092.5prime Sequence
927 bp (771 high quality bases) assembled on 2006-10-23
> BS15092.5prime
GAAGTTATCCGTCGACATGGGTTTCGAACCCTCTGAGGATAAGGCAAGGC
CTGGAGGTCTTGGCGTGCGACACTGGCAGGCGGTTCTTCTGTTCGTGGGC
ATGATGATCAACTACTTCCAGCGGGTGAACATCTCGGCTGCCATTGTGCC
CATGACGCAGTCCACCGCGGGGGCTCCGTTCTACACCTGGGATACGTCGG
ACAAGTCCCTGATCCTCAGCAGCTTTTTCTGGGGCTATGTGGTCTCCCAG
GTGCCGGCAGGACTGCTTGCCAAGCGATTTGGAGCCAAGTTAGTGCTGGG
CCTGGCGACTGCAATCGGAGGTATTTTGTGCTTCTTCCATCCCATTGCAG
CCAAAAGCGGGTGGCAGAGTATCTGCGTTCTGCGCGTTCTTACCGGTCTG
GTCCAGGGCACGGTTTATCCGTGTGTCCACACGCTGCTGGCTAAGTGGGT
GCCACGCACTGAGCGGGGACTGCTAACCACTGGCGTTTATTCGGGAGCAC
AGTTCGGAACGGCTGTCATCCTGGTCACCAGTGGCTTCATCTTCGAATCC
AGCATGGGTTGGCCAGGGTTGTTCTACCTTTCCGGAGGTCTCAGCCTCGC
TTGGGCGCTGCTTTTCTTTTGGCAGGCCGCCAATGAACCGGTTACAGCCA
GCAGGATCAGCAAAGGCGAGGTGGAGTATATCGAAAGCCTTACGGGCAGC
AACAGCTCCAGTCAGTCTATGCCTGTGCCCTGGATGTCGATCTTTAGGTC
GCCAGCCTTTTACGGTCTGCTGGCAGCCCATTGTGGATTCACCTGGGGTT
TCTACACGCTGCTCACCGAAATGCCCACTTACATGAGCATGGTTCTGCAG
CTAAATGTCAAGTCCAATGCCTTCCTCTCCTCGCTGCCGTACTTTGCTAT
GGGGCTGCTCTGCTTTGTGGTCAGTCC
BS15092.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:14:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8791-PA | 1434 | CG8791-RA | 1..911 | 17..927 | 4530 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:49:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8791-RA | 1840 | CG8791-RA | 95..1005 | 17..927 | 4540 | 99.9 | Plus |
CG8791-RB | 2292 | CG8791-RB | 581..1457 | 51..927 | 4370 | 99.9 | Plus |
CG8791-RC | 1811 | CG8791-RC | 100..976 | 51..927 | 4370 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:49:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7928357..7928813 | 259..715 | 2285 | 100 | Plus |
2R | 25286936 | 2R | 7928086..7928296 | 51..261 | 1055 | 100 | Plus |
2R | 25286936 | 2R | 7928874..7929087 | 714..927 | 1055 | 99.5 | Plus |
Blast to na_te.dros performed on 2015-02-12 23:49:50 has no hits.
BS15092.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:48 Download gff for
BS15092.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-PA | 1..911 | 17..927 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:50:07 Download gff for
BS15092.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-PA | 1..911 | 17..927 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:21:35 Download gff for
BS15092.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-RA | 95..1005 | 17..927 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:15:38 Download gff for
BS15092.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-RA | 95..1005 | 17..927 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:15:38 Download gff for
BS15092.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7928876..7929087 | 716..927 | 99 | | Plus |
2R | 7926748..7926780 | 18..50 | 100 | -> | Plus |
2R | 7928086..7928295 | 51..260 | 100 | -> | Plus |
2R | 7928359..7928813 | 261..715 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:21:35 Download gff for
BS15092.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3814253..3814285 | 18..50 | 100 | -> | Plus |
arm_2R | 3815591..3815800 | 51..260 | 100 | -> | Plus |
arm_2R | 3815864..3816318 | 261..715 | 100 | -> | Plus |
arm_2R | 3816381..3816592 | 716..927 | 99 | | Plus |
BS15092.pep Sequence
Translation from 16 to 1449
> BS15092.pep
MGFEPSEDKARPGGLGVRHWQAVLLFVGMMINYFQRVNISAAIVPMTQST
AGAPFYTWDTSDKSLILSSFFWGYVVSQVPAGLLAKRFGAKLVLGLATAI
GGILCFFHPIAAKSGWQSICVLRVLTGLVQGTVYPCVHTLLAKWVPRTER
GLLTTGVYSGAQFGTAVILVTSGFIFESSMGWPGLFYLSGGLSLAWALLF
FWQAANEPVTASRISKGEVEYIESLTGSNSSSQSMPVPWMSIFRSPAFYG
LLAAHCGFTWGFYTLLTEMPTYMSMVLQLNVKSNAFLSSLPYFAMGLLCF
VVSPISDLLINRGTISITTARKLFNSIGQWGPMACLIGLGYMTADEKTWA
ILLLTLAVGINAGCSCGYLINHIDLSPNFAGPMMGVTNGIAGVTSIIAPL
VVGAIVSDEEDPSQWRMVFFITGGIYLVCNTIFVIFGKATIQIWNEPPST
SSTMTLRSHQENDSKSIVPTSDKDIRY*
BS15092.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:02:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8791-PA | 477 | CG8791-PA | 1..477 | 1..477 | 2498 | 100 | Plus |
CG8791-PB | 449 | CG8791-PB | 1..449 | 29..477 | 2346 | 100 | Plus |
CG8791-PC | 449 | CG8791-PC | 1..449 | 29..477 | 2346 | 100 | Plus |
CG15096-PC | 491 | CG15096-PC | 23..477 | 7..449 | 1178 | 50.5 | Plus |
CG15096-PA | 491 | CG15096-PA | 23..477 | 7..449 | 1178 | 50.5 | Plus |