Clone Sequence Records
BS15093.3prime Sequence
375 bp (375 high quality bases) assembled on 2006-10-23
> BS15093.3prime
ATGGTCTAGAAAGCTTTTACTCCTTGACCCGCTCCACCTCGCTGGCGTCG
AAGGGCACCTCCTCCACCTTGTGGAATCCAGAGAACCTGATGATCTTGCC
GGTCCCCTCGACCTTCAGGTGCTTGGCGAACTGTTGGGCCGGCGAAAGGG
CCATCTCCTCCTCCGTCTTGTAGCCGTAGTACTTGGCCCAGTCGTTGCGT
CCGGTGTAGACCATATAGCAAACGAGGCCGAATGCCTGCCAGGCCAGAAC
GGCGTACCCGATGCTCAGGCGCCGCTTCCACAGCTCCGCCCGGTGCTCCG
GTATGGGATTCGTGTTGCGCCGCACCCAGCGGCGCAGCCACTTCATCTCG
AACAGTGCCATGTCGACTGATAACT
BS15093.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:14:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13365-PA | 345 | CG13365-RA | 1..345 | 361..17 | 1725 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:07:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13365-RA | 499 | CG13365-RA | 71..415 | 361..17 | 1725 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:07:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 620801..621145 | 17..361 | 1725 | 100 | Plus |
X | 23542271 | X | 620419..620598 | 18..197 | 690 | 92.2 | Plus |
Blast to na_te.dros performed on 2015-02-13 00:07:34 has no hits.
BS15093.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:49 Download gff for
BS15093.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-PA | 1..345 | 17..361 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:50:09 Download gff for
BS15093.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-PA | 1..345 | 17..361 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:22:30 Download gff for
BS15093.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-RA | 65..415 | 17..369 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:40:26 Download gff for
BS15093.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-RA | 65..415 | 17..369 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:40:26 Download gff for
BS15093.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 620801..621149 | 17..369 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:22:30 Download gff for
BS15093.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 514834..515182 | 17..369 | 98 | | Plus |
BS15093.5prime Sequence
375 bp (375 high quality bases) assembled on 2006-10-23
> BS15093.5prime
GAAGTTATCAGTCGACATGGCACTGTTCGAGATGAAGTGGCTGCGCCGCT
GGGTGCGGCGCAACACGAATCCCATACCGGAGCACCGGGCGGAGCTGTGG
AAGCGGCGCCTGAGCATCGGGTACGCCGTTCTGGCCTGGCAGGCATTCGG
CCTCGTTTGCTATATGGTCTACACCGGACGCAACGACTGGGCCAAGTACT
ACGGCTACAAGACGGAGGAGGAGATGGCCCTTTCGCCGGCCCAACAGTTC
GCCAAGCACCTGAAGGTCGAGGGGACCGGCAAGATCATCAGGTTCTCTGG
ATTCCACAAGGTGGAGGAGGTGCCCTTCGACGCCAGCGAGGTGGAGCGGG
TCAAGGAGTAAAAGCTTTCTAGACC
BS15093.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:14:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13365-PA | 345 | CG13365-RA | 1..345 | 17..361 | 1725 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:50:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13365-RA | 499 | CG13365-RA | 71..415 | 17..361 | 1725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:50:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 620801..621145 | 361..17 | 1725 | 100 | Minus |
X | 23542271 | X | 620419..620598 | 360..181 | 690 | 92.2 | Minus |
Blast to na_te.dros performed on 2015-02-12 23:50:28 has no hits.
BS15093.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:50 Download gff for
BS15093.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-PA | 1..345 | 17..361 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:50:10 Download gff for
BS15093.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-PA | 1..345 | 17..361 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:21:42 Download gff for
BS15093.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-RA | 65..415 | 9..361 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:17:01 Download gff for
BS15093.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-RA | 65..415 | 9..361 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:17:01 Download gff for
BS15093.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 620801..621149 | 9..361 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:21:42 Download gff for
BS15093.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 514834..515182 | 9..361 | 98 | | Minus |
BS15093.complete Sequence
377 bp assembled on 2006-11-01
GenBank Submission: FJ637872
> BS15093.complete
GAAGTTATCAGTCGACATGGCACTGTTCGAGATGAAGTGGCTGCGCCGCT
GGGTGCGGCGCAACACGAATCCCATACCGGAGCACCGGGCGGAGCTGTGG
AAGCGGCGCCTGAGCATCGGGTACGCCGTTCTGGCCTGGCAGGCATTCGG
CCTCGTTTGCTATATGGTCTACACCGGACGCAACGACTGGGCCAAGTACT
ACGGCTACAAGACGGAGGAGGAGATGGCCCTTTCGCCGGCCCAACAGTTC
GCCAAGCACCTGAAGGTCGAGGGGACCGGCAAGATCATCAGGTTCTCTGG
ATTCCACAAGGTGGAGGAGGTGCCCTTCGACGCCAGCGAGGTGGAGCGGG
TCAAGGAGTAAAAGCTTTCTAGACCAT
BS15093.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:03:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13365-RA | 345 | CG13365-PA | 1..345 | 17..361 | 1725 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:03:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13365-RA | 499 | CG13365-RA | 71..415 | 17..361 | 1725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:03:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 620801..621145 | 361..17 | 1725 | 100 | Minus |
X | 23542271 | X | 620419..620598 | 360..181 | 690 | 92.2 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:03:23 has no hits.
BS15093.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:33:33 Download gff for
BS15093.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-RA | 1..345 | 17..361 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:06:13 Download gff for
BS15093.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-RA | 58..408 | 9..361 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:36:38 Download gff for
BS15093.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-RA | 71..413 | 17..359 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:33:33 Download gff for
BS15093.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-RA | 58..408 | 9..361 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:58:57 Download gff for
BS15093.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-RA | 71..413 | 17..359 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:58:57 Download gff for
BS15093.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 620803..621145 | 17..359 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:36:38 Download gff for
BS15093.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 514836..515178 | 17..359 | 100 | | Minus |
BS15093.pep Sequence
Translation from 16 to 360
> BS15093.pep
MALFEMKWLRRWVRRNTNPIPEHRAELWKRRLSIGYAVLAWQAFGLVCYM
VYTGRNDWAKYYGYKTEEEMALSPAQQFAKHLKVEGTGKIIRFSGFHKVE
EVPFDASEVERVKE*
BS15093.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:26:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13365-PA | 114 | CG13365-PA | 1..114 | 1..114 | 616 | 100 | Plus |