Clone BS15094 Report

Search the DGRC for BS15094

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:150
Well:94
Vector:pDNR-Dual
Associated Gene/TranscriptCG11852-RA
Protein status:BS15094.pep: full length peptide match
Sequenced Size:785

Clone Sequence Records

BS15094.complete Sequence

785 bp assembled on 2010-02-09

GenBank Submission: KX803702

> BS15094.complete
GAAGTTATCAGTCGACATGATGCTGCTCCAGCTGGGCTGCGTGGCCCTCT
TCTGCTGCTTGGTTAGCGGTGCCTCGAATTTCCCTCCCGAACTGCCGCGC
TGCCACATGGGCGACACCAGCTGCATCATCAACGTGTCGCACATGCTGAT
CAGACAGCACGCGAGGACCGGCTATCCGTCCGCTGGATTCCCCCAGGTGG
AGCCCTTCCTGATCAAGCGCTTCGACATCTCCGACGGACGCACTGGCTCC
CTGAATCTAAAGCTCAACTTCAGGGACGTGAATGTGGAGGGCCTGTCCAG
TGTGAAGTTCGACAGAGCCGTTGGCTTTGGCGCTGATCCTGCAACCAGCA
AGTTTGAGATGTACGGATCCTTTCCCAAGATCGTGCTGAAGGGCAAGTAC
GTGGCGGATGGACGCATCCTGATCCTGCCGATTCGTGGCGATGGCGATGC
CGAGATCGTGTTGCACAATCCCAAGTTTTCGGTGAAATTCAAGCCGGGCA
CACAGCAGCGCAATGGACGCACCTACCTGAGCGTGGATAAGCTCAAGGTT
CTGGTGGAGCCACAAAAGATGAACATTCGGCTGGAGAACCTCTTTAATGG
CGACCAGGCATTGGGCACCAATCTGAATCAGTTCCTCAACGACAACTGGA
CGGAGGTGTGGAACGAGCTGCATCCCTCCATTCATGTGGCCATCGCCGAG
ATCATGAAGAGCGTTCTCTCGCAGCTCTTCAAGCGCTTCGCCTACGAGGA
TTTATTCCTCGAGAACTGAAAGCTTTCTAGACCAT

BS15094.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:34:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG11852-RA 753 CG11852-PA 1..753 17..769 3765 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:34:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG11852-RA 1045 CG11852-RA 100..852 17..769 3765 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:34:39
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25238200..25238446 322..568 1235 100 Plus
3R 32079331 3R 25237837..25238074 84..321 1190 100 Plus
3R 32079331 3R 25238501..25238702 568..769 1010 100 Plus
3R 32079331 3R 25237713..25237779 17..83 335 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:34:41 has no hits.

BS15094.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:12:21 Download gff for BS15094.complete
Subject Subject Range Query Range Percent Splice Strand
CG11852-RA 89..840 17..768 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:06 Download gff for BS15094.complete
Subject Subject Range Query Range Percent Splice Strand
CG11852-RA 100..851 17..768 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:21:44 Download gff for BS15094.complete
Subject Subject Range Query Range Percent Splice Strand
CG11852-RA 89..840 17..768 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:32:01 Download gff for BS15094.complete
Subject Subject Range Query Range Percent Splice Strand
CG11852-RA 100..851 17..768 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:32:01 Download gff for BS15094.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25237837..25238074 84..321 100 -> Plus
3R 25238200..25238445 322..567 100 -> Plus
3R 25238501..25238701 568..768 100   Plus
3R 25237713..25237779 17..83 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:06 Download gff for BS15094.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21063435..21063501 17..83 100 -> Plus
arm_3R 21063559..21063796 84..321 100 -> Plus
arm_3R 21063922..21064167 322..567 100 -> Plus
arm_3R 21064223..21064423 568..768 100   Plus

BS15094.3prime Sequence

783 bp (731 high quality bases) assembled on 2006-10-23

> BS15094.3prime
ATGGTCTAGAAAGCTTTCACTTCTCGAGGAATAAATCCTCGTAGGCGAAG
CGCTTGAAGAGCTGCGAGAGAACGCTCTTCATGATCTCGGCGATGGCCAC
ATGAATGGAGGGATGCAGCTCGTTCCACACCTCCGTCCAGTTGTCGTTGA
GGAACTGATTCAGATTGGTGCCCAATGCCTGGTCGCCATTAAAGAGGTTC
TCCAGCCGAATGTTCATCTTTTGTGGCTCCACCAGAACCTTGAGCTTATC
CACGCTCAGGTAGGTGCGTCCATTGCGCTGCTGTGTGCCCGGCTTGAATT
TCACCGAAAACTTGGGATTGTGCAACACGATCTCGGCATCGCCATCGCCA
CGAATCGGCAGGATCAGGATGCGTCCATCCGCCACGTACTTGCCCTTCAG
CACGATCTTGGGAAAGGATCCGTACATCTCAAACTTGCTGGTTGCAGGAT
CAGCGCCAAAGCCAACGGCTCTGTCGAACTTCACACTGGACAGGCCCTCC
ACATTCACGTCCCTGAAGTTGAGCTTTAGATTCAGGGAGCCAGTGCGTCC
GTCGGAGATGTCGAAGCGCTTGATCAGGAAGGGCTCCACCTGGGGGAATC
CAGCGGACGGATAGCCGGTCCTCGCGTGCTGTCTGATCAGCATGTGCGAC
ACGTTGATGATGCAGCTGGTGTCGCCCATGTGGCAGCGCGGCAGTTCGGG
AGGGAAATTCGAGGCACCGCTAACCAAGCAGCAGAAGAGGGCCACGCAGC
CCAGCTGGAGCAGCATCATGTCCACTGATAACT

BS15094.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:14:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG11852-PA 753 CG11852-RA 1..749 769..21 3745 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:17:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG11852-RA 1045 CG11852-RA 100..852 769..17 3750 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 21:17:41
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25238200..25238446 464..218 1235 100 Minus
3R 32079331 3R 25237837..25238074 702..465 1190 100 Minus
3R 32079331 3R 25238501..25238702 218..17 995 99.5 Minus
3R 32079331 3R 25237713..25237779 769..703 335 100 Minus
Blast to na_te.dros performed on 2015-02-04 21:17:43 has no hits.

BS15094.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:51 Download gff for BS15094.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11852-PA 1..753 17..769 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:50:12 Download gff for BS15094.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11852-PA 1..753 17..769 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:41:37 Download gff for BS15094.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11852-RA 96..854 13..777 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-05 00:45:20 Download gff for BS15094.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11852-RA 96..854 13..777 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-05 00:45:20 Download gff for BS15094.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 25237709..25237779 703..777 94 -> Minus
3R 25237837..25238074 465..702 100 -> Minus
3R 25238200..25238445 219..464 100 -> Minus
3R 25238501..25238704 13..218 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:41:37 Download gff for BS15094.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21063431..21063501 703..777 94 -> Minus
arm_3R 21063559..21063796 465..702 100 -> Minus
arm_3R 21063922..21064167 219..464 100 -> Minus
arm_3R 21064223..21064426 13..218 98   Minus

BS15094.5prime Sequence

783 bp (726 high quality bases) assembled on 2006-10-23

> BS15094.5prime
GAAGTTATCCTTCGACATGATGCTGCTCCAGCTGGGCTGCGTGGCCCTCT
TCTGCTGCTTGGTTAGCGGTGCCTCGAATTTCCCTCCCGAACTGCCGCGC
TGCCACATGGGCGACACCAGCTGCATCATCAACGTGTCGCACATGCTGAT
CAGACAGCACGCGAGGACCGGCTATCCGTCCGCTGGATTCCCCCAGGTGG
AGCCCTTCCTGATCAAGCGCTTCGACATCTCCGACGGACGCACTGGCTCC
CTGAATCTAAAGCTCAACTTCAGGGACGTGAATGTGGAGGGCCTGTCCAG
TGTGAAGTTCGACAGAGCCGTTGGCTTTGGCGCTGATCCTGCAACCAGCA
AGTTTGAGATGTACGGATCCTTTCCCAAGATCGTGCTGAAGGGCAAGTAC
GTGGCGGATGGACGCATCCTGATCCTGCCGATTCGTGGCGATGGCGATGC
CGAGATCGTGTTGCACAATCCCAAGTTTTCGGTGAAATTCAAGCCGGGCA
CACAGCAGCGCAATGGACGCACCTACCTGAGCGTGGATAAGCTCAAGGTT
CTGGTGGAGCCACAAAAGATGAACATTCGGCTGGAGAACCTCTTTAATGG
CGACCAGGCATTGGGCACCAATCTGAATCAGTTCCTCAACGACAACTGGA
CGGAGGTGTGGAACGAGCTGCATCCCTCCATTCATGTGGCCATCGCCGAG
ATCATGAAGAGCGTTCTCTCGCAGCTCTTNCAGCGCTTCGCCTACGAGGA
TTTATTCCTCGAGAACTGAAAGCTTTCTAGACC

BS15094.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:14:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG11852-PA 753 CG11852-RA 1..753 17..769 3721 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:56:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG11852-RA 1045 CG11852-RA 100..852 17..769 3739 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:56:52
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25238200..25238446 322..568 1235 100 Plus
3R 32079331 3R 25237837..25238074 84..321 1190 100 Plus
3R 32079331 3R 25238501..25238702 568..769 984 99 Plus
3R 32079331 3R 25237713..25237779 17..83 335 100 Plus
Blast to na_te.dros performed on 2015-02-12 23:56:54 has no hits.

BS15094.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:16:52 Download gff for BS15094.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11852-PA 1..753 17..769 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:50:13 Download gff for BS15094.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11852-PA 1..753 17..769 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:22:02 Download gff for BS15094.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11852-RA 92..854 6..773 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:30:28 Download gff for BS15094.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11852-RA 92..854 6..773 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:30:28 Download gff for BS15094.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 25237705..25237779 6..83 94 -> Plus
3R 25237837..25238074 84..321 100 -> Plus
3R 25238200..25238445 322..567 100 -> Plus
3R 25238501..25238704 568..773 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:22:02 Download gff for BS15094.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21063427..21063501 6..83 94 -> Plus
arm_3R 21063559..21063796 84..321 100 -> Plus
arm_3R 21063922..21064167 322..567 100 -> Plus
arm_3R 21064223..21064426 568..773 98   Plus

BS15094.pep Sequence

Translation from 16 to 768

> BS15094.pep
MMLLQLGCVALFCCLVSGASNFPPELPRCHMGDTSCIINVSHMLIRQHAR
TGYPSAGFPQVEPFLIKRFDISDGRTGSLNLKLNFRDVNVEGLSSVKFDR
AVGFGADPATSKFEMYGSFPKIVLKGKYVADGRILILPIRGDGDAEIVLH
NPKFSVKFKPGTQQRNGRTYLSVDKLKVLVEPQKMNIRLENLFNGDQALG
TNLNQFLNDNWTEVWNELHPSIHVAIAEIMKSVLSQLFKRFAYEDLFLEN
*

BS15094.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:11:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG11852-PA 250 CG11852-PA 1..250 1..250 1311 100 Plus
CG11854-PB 250 CG11854-PB 1..249 2..248 371 34.4 Plus
to-PB 249 CG11853-PB 1..247 3..249 341 30.6 Plus
to-PA 249 CG11853-PA 1..247 3..249 341 30.6 Plus
CG10407-PB 259 CG10407-PB 31..256 19..246 313 30 Plus