Clone Sequence Records
BS15110.3prime Sequence
827 bp (741 high quality bases) assembled on 2006-10-23
> BS15110.3prime
ATGGTCTAGAAAGCTTCTACATCTGCTCGAGTTCCTTGTCGGCCTTTTTG
CAGAATGAATCTAAGAGTTGGAACCCGAAGCTACTGGCAGGTGCCCTGTG
TATGGCGACGTCGCAGGACCGTAAGCCGTAGTAGCTGTGGCTGAACTCTA
AGGATATGCGATAAACCTCGGCGCAAAAGATGTGACTATAATTCAAATGA
TCGTGCATTATGTGTTGAAGCTGGACCAACTTGGCCAAGTATCTCATTTG
ACTGTGGGTCAGTGGACGAGCAGTGAAGTTACGCTGCGACTCACAGCCTC
CAGTCACCTTCTCCATGGGTAGTCCGAAGACGAGAGATATAGCCTCTGGC
AAGGTGTACGGAATTCTTGTGTTGCTGCTCAGGCATACAGCCACAAAGGT
ATCAAATATTCCTCCCAACGAGATGCGTTGCCTATGCAACAGATGATCGG
CGATCCGGTGGCTGTAGTGGATTACCTTGCGCGGCTGATCCGCCTCCAGA
ATCTTGGCCAGTTCCAGAAATATCAAGCCAAGGGCCTTGATGTCGAAAAT
GTACGTTCCATTGCACGTGGCTACCACCAAAATAGACGTGGGGTGATGTC
GTCCGTAAAAACTGGGCTCCACCAGCAGCGATATGATCTTCTGATCCTTT
ATGTCCTTTAGTGCACTGTGGTATGTGGTATCCACCTGGTATATCAAAAC
AATTCGATCTAGTTGCTTCTCCAGGATTTCCAGTTCTCGTTTTCCGAAAG
GGTAACGAATGTTTTCCGGGAGACTGTCCAGAGCAAAGCTCTCGTTTTCA
TCGCTCTTGTTCATGTCGACTGATAAC
BS15110.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:14:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11263-PA | 798 | CG11263-RA | 1..794 | 814..21 | 3895 | 99.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:23:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11263-RB | 1017 | CG11263-RB | 48..845 | 814..17 | 3930 | 99.5 | Minus |
| CG11263-RA | 1065 | CG11263-RA | 96..893 | 814..17 | 3930 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:23:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13006912..13007709 | 814..17 | 3930 | 99.5 | Minus |
Blast to na_te.dros performed on 2015-02-12 10:23:28 has no hits.
BS15110.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:17:09 Download gff for
BS15110.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11263-PA | 1..798 | 17..814 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:50:31 Download gff for
BS15110.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11263-PA | 1..798 | 17..814 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:56:47 Download gff for
BS15110.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11263-RA | 96..896 | 14..814 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:58:21 Download gff for
BS15110.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11263-RA | 96..896 | 14..814 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:58:21 Download gff for
BS15110.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13006912..13007712 | 14..814 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:56:47 Download gff for
BS15110.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13000012..13000812 | 14..814 | 99 | | Minus |
BS15110.5prime Sequence
819 bp (802 high quality bases) assembled on 2006-10-23
> BS15110.5prime
GAAGTTATCAGTCGACATGAACAAGAGCGATGGAAACGAGAGCTTTGCTC
TGGACAGTCTCCCGGAAAACATTCGTTACCCTTTCGGAAAACGAGAACTG
GAAATCCTGGAGAAGCAACTAGATCGAATTGTTTTGATATACCAGGTGGA
TACCACATACCACAGTGCACTAAAGGACATAAAGGATCAGAAGATCATAT
CGCTGCTGGTGGAGCCCAGTTTTTACGGACGACATCACCCCACGTCTATT
TTGGTGGTAGCCACGTGCAATGGAACGTACATTTTCGACATCAAGGCCCT
TGGCTTGATATTTCTGGAACTGGCCAAGATTCTGGAGGCGGATCAGCCGC
GCAAGGTAATCCACTACAGCCACCGGATCGCCGATCATCTGTTGCATAGG
CAACGCATCTCGTTGGGAGGAATATTTGATACCTTTGTGGCTGTATGCCT
GAGCAGCAACACAAGAATTCCGTACACCTTGCCAGAGGCTATATCTCTCG
TCTTCGGACTACCCATGGAGAAGGTGACTGGAGGCTGTGAGTCGCAGCGT
AACTTCACTGCTCGTCCACTGACCCACAGTCAAATGAGATACTTGGCCAA
GTTGGTCCAGCTTCAACACATAATGCACGATCATTTGAATTATAGTCACA
TCTTTTGCGCCGAGGTTTATCGCATATCCTTAGAGTTCAGCCACAGCTAC
TACGGCTTACGGTCCTGCGACGTCGCCATAAACATGGCACCTGCCAGTAG
CTTCGGGTTCCAACTCTTAGATTCATTCTGCAAAAAGGGCGACAAGGAAC
TCGAGCAGATCTAGAAGCT
BS15110.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:14:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11263-PA | 798 | CG11263-RA | 1..798 | 17..814 | 3965 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:18:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11263-RB | 1017 | CG11263-RB | 48..845 | 17..814 | 3975 | 99.9 | Plus |
| CG11263-RA | 1065 | CG11263-RA | 96..893 | 17..814 | 3975 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 21:18:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13006912..13007709 | 17..814 | 3975 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-04 21:18:20 has no hits.
BS15110.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:17:10 Download gff for
BS15110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11263-PA | 1..798 | 17..814 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:50:33 Download gff for
BS15110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11263-PA | 1..798 | 17..814 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:41:49 Download gff for
BS15110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11263-RA | 96..896 | 17..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-05 00:45:30 Download gff for
BS15110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11263-RA | 96..896 | 17..819 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-05 00:45:30 Download gff for
BS15110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13006912..13007712 | 17..819 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:41:49 Download gff for
BS15110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13000012..13000812 | 17..819 | 99 | | Plus |
BS15110.complete Sequence
830 bp assembled on 2006-11-01
GenBank Submission: FJ637875
> BS15110.complete
GAAGTTATCAGTCGACATGAACAAGAGCGATGGAAACGAGAGCTTTGCTC
TGGACAGTCTCCCGGAAAACATTCGTTACCCTTTCGGAAAACGAGAACTG
GAAATCCTGGAGAAGCAACTAGATCGAATTGTTTTGATATACCAGGTGGA
TACCACATACCACAGTGCACTAAAGGACATAAAGGATCAGAAGATCATAT
CGCTGCTGGTGGAGCCCAGTTTTTACGGACGACATCACCCCACGTCTATT
TTGGTGGTAGCCACGTGCAATGGAACGTACATTTTCGACATCAAGGCCCT
TGGCTTGATATTTCTGGAACTGGCCAAGATTCTGGAGGCGGATCAGCCGC
GCAAGGTAATCCACTACAGCCACCGGATCGCCGATCATCTGTTGCATAGG
CAACGCATCTCGTTGGGAGGAATATTTGATACCTTTGTGGCTGTATGCCT
GAGCAGCAACACAAGAATTCCGTACACCTTGCCAGAGGCTATATCTCTCG
TCTTCGGACTACCCATGGAGAAGGTGACTGGAGGCTGTGAGTCGCAGCGT
AACTTCACTGCTCGTCCACTGACCCACAGTCAAATGAGATACTTGGCCAA
GTTGGTCCAGCTTCAACACATAATGCACGATCATTTGAATTATAGTCACA
TCTTTTGCGCCGAGGTTTATCGCATATCCTTAGAGTTCAGCCACAGCTAC
TACGGCTTACGGTCCTGCGACGTCGCCATAAACATGGCACCTGCCAGTAG
CTTCGGGTTCCAACTCTTAGATTCATTCTGCAAAAAGGCCGACAAGGAAC
TCGAGCAGATCTAGAAGCTTTCTAGACCAT
BS15110.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:36:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11263-RB | 798 | CG11263-PB | 1..798 | 17..814 | 3990 | 100 | Plus |
| CG11263-RA | 798 | CG11263-PA | 1..798 | 17..814 | 3990 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:36:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11263-RB | 1017 | CG11263-RB | 48..845 | 17..814 | 3990 | 100 | Plus |
| CG11263-RA | 1065 | CG11263-RA | 96..893 | 17..814 | 3990 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:36:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13006912..13007709 | 17..814 | 3990 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:36:24 has no hits.
BS15110.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:33:37 Download gff for
BS15110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11263-RA | 1..798 | 17..814 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:54:15 Download gff for
BS15110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11263-RA | 89..889 | 17..817 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:27:54 Download gff for
BS15110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11263-RA | 96..893 | 17..814 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:33:37 Download gff for
BS15110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11263-RA | 89..889 | 17..817 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:34:45 Download gff for
BS15110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11263-RA | 96..893 | 17..814 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:34:45 Download gff for
BS15110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13006912..13007709 | 17..814 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:27:54 Download gff for
BS15110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13000012..13000809 | 17..814 | 100 | | Plus |
BS15110.pep Sequence
Translation from 16 to 813
> BS15110.pep
MNKSDGNESFALDSLPENIRYPFGKRELEILEKQLDRIVLIYQVDTTYHS
ALKDIKDQKIISLLVEPSFYGRHHPTSILVVATCNGTYIFDIKALGLIFL
ELAKILEADQPRKVIHYSHRIADHLLHRQRISLGGIFDTFVAVCLSSNTR
IPYTLPEAISLVFGLPMEKVTGGCESQRNFTARPLTHSQMRYLAKLVQLQ
HIMHDHLNYSHIFCAEVYRISLEFSHSYYGLRSCDVAINMAPASSFGFQL
LDSFCKKADKELEQI*
BS15110.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:30:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11263-PB | 265 | CG11263-PB | 1..265 | 1..265 | 1374 | 100 | Plus |
| CG11263-PA | 265 | CG11263-PA | 1..265 | 1..265 | 1374 | 100 | Plus |
