Clone BS15111 Report

Search the DGRC for BS15111

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:151
Well:11
Vector:pDNR-Dual
Associated Gene/TranscriptCG10362-RA
Protein status:BS15111.pep: full length peptide match
Sequenced Size:3146

Clone Sequence Records

BS15111.3prime Sequence

786 bp (735 high quality bases) assembled on 2006-10-24

> BS15111.3prime
ATGGTCTAGAAAGCTTCTCCTGTAGCACCACACCCTGGGCATGTTGCAGA
CCCGTGCACAAGTACAGCATGATGATGCTGAGCGCCTGGACACCCTCATC
CGATCTGTCCGATTTCCAGGGCGAGGATTCGGTGGCCTTCTCCGCATCGT
TCATCAGCGTATAGCCCTCGGTCTCCGCATCCAGGGCTACTTTCAGTTTC
GTTAACAACTCGTTTATCTTGGCCACACGCTCATCGGGCGGCAGGGCAGC
GTATAGGAGTTTGCTGGTGCTCTTGGCCAGATTCATCAGATCCTCGTTGC
GGGTGTGACGAATGATGGGCTCCGTGATGACGATCACCTGCTCGAAGCTG
AGCTCCGGACAGTCCAAGGGCAGGGCCTCCAGGTGCTGGGTGACGCTCTC
GAAAGGATTCTGCTGCAGAGCAGGAGTCGCCTCTTCCACAATCGACGATT
TTCGCGATGGCGTGTGCTGTGGACTGGGAGGCAGGCTCTTGGAGTTCACC
TGCTGACCACTGCCAGTTAGCGAGGATACGATGCCGGGAATGTCCAAGTT
GCTCGCCTGCCGCTTGATGCCCTGGGCCAGCATCCCGGTGAGGCTGGATC
GATGGACATCCAAGCCAGAGGCCGTTGGCGATTGAATTTGCCCCTGATCT
CCGCCAGATGCAGCAGACGTCTCATCAAACGGAGTCGCACCCGTGCTGGA
ATCAACGATCTGTGGATTGTCGGCCTGTGTGATGGTGAACTCCGGTCGGC
TGGCCATTGAAGGAGTGGAGGAGGTTGCCGGTATGG

BS15111.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:14:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG10362-PA 3114 CG10362-RA 2345..3107 786..24 3790 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:04:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG10362-RA 3776 CG10362-RA 2682..3452 786..16 3810 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:04:25
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11927322..11927655 453..786 1670 100 Plus
X 23542271 X 11927006..11927257 202..453 1245 99.6 Plus
X 23542271 X 11926748..11926938 16..206 910 98.4 Plus
Blast to na_te.dros performed on 2015-02-12 16:04:26 has no hits.

BS15111.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:17:11 Download gff for BS15111.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10362-PA 2345..3114 17..786 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:50:35 Download gff for BS15111.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10362-PA 2345..3114 17..786 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:24:21 Download gff for BS15111.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10362-RA 2682..3452 16..786 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:40:00 Download gff for BS15111.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10362-RA 2682..3452 16..786 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:40:00 Download gff for BS15111.3prime
Subject Subject Range Query Range Percent Splice Strand
X 11926748..11926937 16..205 98 <- Plus
X 11927010..11927256 206..452 100 <- Plus
X 11927322..11927655 453..786 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:24:21 Download gff for BS15111.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11820781..11820970 16..205 98 <- Plus
arm_X 11821043..11821289 206..452 100 <- Plus
arm_X 11821355..11821688 453..786 100   Plus

BS15111.5prime Sequence

698 bp (664 high quality bases) assembled on 2006-10-23

> BS15111.5prime
GAAGTTACCCTTCGACATGGAGATACCCATTTCAAACATTCTGCTGCTCT
GCCTGATCTTTCTGTTGATCGGCGGAGTGGTGATGATCCTGCTGCAGTAT
CTCATCTTCATCAAGTTCTCGAATCTGCCCGACGAAAGCGAGGAGCAGAA
GCAGGCGAATGCCAAATACACCCTGCCATTGAACATCAAGCAGACGGCCA
GGAACCTGAAGAGGCTATCCAATTCCGGACTGGGTGGTGGCGCTGGGAAT
GGATGCGAGAACCATCAGGAGAGCCTCCGACGGGCCTCCGCCCTGGTCTC
CCTCAACTTTGTCATGCAGTTTCTCTTCCACGAGTTCAAGAACTCCAATC
GGGTGCGGAAATGGTTCTATCGCAAGCTGTCCATCGAGCTGGACGAACTG
ATTTCCAAGACTACCACCGGAAAACTGCTGGACAAGCTAACGATTAAAGA
GCTCGAGTTGGGCGACCAGTTTCCGGACGTCAAGTCGCTATCGGTGCACA
ACGTGGAATTGGACAAGGATGAGCAGCGCATCGAGAATCTCGACCTTCTG
CTGGACATCAACTACGTTGGCAATTTCACAACTTCCCATTGACGCGGACA
TGGTGCTGGGCAAGAAGGGATCGATAACGCTTAGGGTCAACAGCTTTCGG
GAATGGCGCGCCTGCAGTTCACGAGAAAGCCCTACACGCACTGGTCCA

BS15111.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:14:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG10362-PA 3114 CG10362-RA 1..570 17..586 2850 100 Plus
CG10362-PA 3114 CG10362-RA 623..680 639..696 290 100 Plus
CG10362-PA 3114 CG10362-RA 569..623 586..640 275 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:42:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG10362-RA 3776 CG10362-RA 337..1017 16..696 3360 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:41:58
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11930021..11930282 442..181 1310 100 Minus
X 23542271 X 11929712..11929905 636..442 925 99.5 Minus
X 23542271 X 11930349..11930514 181..16 830 100 Minus
X 23542271 X 11929448..11929505 696..639 290 100 Minus
Blast to na_te.dros performed on 2015-02-13 12:41:59 has no hits.

BS15111.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:17:13 Download gff for BS15111.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10362-PA 1..680 17..697 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:50:36 Download gff for BS15111.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10362-PA 1..680 17..697 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:03:50 Download gff for BS15111.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10362-RA 333..1017 9..697 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:20:31 Download gff for BS15111.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10362-RA 333..1017 9..697 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:20:31 Download gff for BS15111.5prime
Subject Subject Range Query Range Percent Splice Strand
X 11930021..11930281 182..442 100 <- Minus
X 11930349..11930518 9..181 97   Minus
X 11929447..11929508 637..697 96 <- Minus
X 11929712..11929904 443..636 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:03:50 Download gff for BS15111.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11824382..11824551 9..181 97   Minus
arm_X 11823480..11823541 637..697 96 <- Minus
arm_X 11823745..11823937 443..636 99 <- Minus
arm_X 11824054..11824314 182..442 100 <- Minus

BS15111.complete Sequence

3146 bp assembled on 2010-08-12

GenBank Submission: KX802120

> BS15111.complete
GAAGTTATCATTCGACATGGAGATACCCATTTCAAACATTCTGCTGCTCT
GCCTGATCTTTCTGTTGATCGGCGGAGTGGTGATGATCCTGCTGCAGTAT
CTCATCTTCATCAAGTTCTCGAATCTGCCCGACGAAAGCGAGGAGCAGAA
GCAGGCGAATGCCAAATACACCCTGCCATTGAACATCAAGCAGACGGCCA
GGAACCTGAAGAGGCTATCCAATTCCGGACTGGGTGGTGGCGCTGGGAAT
GGATGCGAGAACCATCAGGAGAGCCTCCGACGGGCCTCCGCCCTGGTCTC
CCTCAACTTTGTCATGCAGTTTCTCTTCCACGAGTTCAAGAACTCCAATC
GGGTGCGGAAATGGTTCTATCGCAAGCTGTCCATCGAGCTGGACGAACTG
ATTTCCAAGACTACCACCGGAAAACTGCTGGACAAGCTAACGATTAAAGA
GCTCGAGTTGGGCGACCAGTTTCCGGACGTCAAGTCGCTATCGGTGCACA
ACGTGGAATTGGACAAGGATGAGCAGCGCATCGAGAATCTCGACCTTCTG
CTGGACATCAACTACGTTGGCAATTTCACAACTTCCATTGACGCGGACAT
GGTGCTGGGCAAGAAGGGATCGATAACGCTTAGGGTCAAACAGCTTTCGG
GAATGGCGCGCCTGCAGTTCACGAGAAAGCCCTACACGCACTGGTCAATT
AGTTTCCTGGGCGATCCGGAGCTGATCCTGGACATCGAGTCGAAGTACCA
GGGCCGCCAGATGCAGTCGAACATAACCAACCTGATCTCAAACCAGATCC
GAAAGGCGGTTCGCCGGAAACACACGTTGCCCAACTACAAGCTGCGCTAC
AAGCCCTTCTTCCACTGGACGGCGGAGGAGGACGCGAGCGACTGTGACAT
TCAACCGAATGGCCTGCTCACCGTCAAGCTGGCGGAGCTGTCCCGGTTGA
TGGGCTATCCGGGCGCCAGTGAGACGTACTGCACCATCACGCTGGCGCCG
GTGCCGTTTATCGAGGCCAGTCAGCGGGATAGCCGGAATGTGCTCATCTC
GTTGGACGTGTTCATTCACAAGGCGAAGAACCAGCAGATTGGAATCGTCT
TCAAGCAGAGCGGCAGCCAGGTGGTGCGAATCGAGTCCGTGCTCCCGAAT
ACACCGGCCTGCAAGTCCAACCTGCTGGCCGGCGACGTTCTGGTGGCCAT
CGAAGGCAGGCCGGTGACCACCATTCAGCAGATCGCCAAGGTGGTCAAGA
CGCTGCAGGCCACTGTCTTTAGTCTGCGCATTGAGCGCATTATTCCTGGA
ATTATTCGCAACGATGCCATACTGGAGGACTTCGAAAAGTACGAGGATAT
CGGCGATTTGCCAAGTTCGTATCCCTGCCAACCGAAGTTGGAAACGGATG
AGGCTGCAACCGCTGATCCGACACCCAAGCACCTGGTGGTGAAGCCCAGT
TTGAGCGGAACACCAACCAATTCCCCCAAGAAGTCCAACCTCATTGCCAA
GGCTATCAAGAAGACAATGAGTCGAGAGAGTGGGGATAAGGATCGGGACA
AGGATAAGGATAAGGACAAAGATAAAGATAAAGACAAGGACAAAGATAAG
GACAAGGATAAGGACAAGGATAAGGACAAAGGCAAGGAGGAGGTGGAGGA
GCCGGTCAACTACTTCTATCAGCACTCCACCATCGACTGTCCATTTAGTC
CACTTATCCACATGGAAGACGTGTGCAGCTTCCAGTTGGACAATTCCAGT
CGCTTCCTCAACGTCTGCGTCTTTGGCAAATCCGCCGGCGAGAGTGTGCT
TCTGGGTTATAACAATGTCCAGATCGGTCAGATTCTCGTCGAGTGCTCCG
AAACCAGTTTGAACCAGTGCCTCAAGCAGATCAGTCTCAATCCGGCATCA
CTGCAGGCTGTAAAGACGCATCCGCTGTCCAATCAGTCCGGCTTCAATCC
GAACCTCTGCTTTGGCGACATTCTGTTTGGCTTCTCCTGGATGGGCAATC
CCAATTTGACGGTGGGTGATGTTCCCATCAAAAGCACATCCAAGTCCCAG
TCTCCGGCCAGAAATCCCTTAGCTGGCGACCGAGTAGCTTCAGAAGATCA
GTCGCAGTTCCTCAAGCTGACGAGCTCTATGGCAGACAGCTCCACATCTG
GCGAATCCTCTAGTGGCACCACTGCCGCTCCAAGGGCACACGACTTTGTG
AGGACCCACTTCCATCGGGCAACACAGTGCGACTTCTGCGGCAAGAAAAT
TTGGTTGAAGGACGCCATGCAGTGCCAGGAGTGCTCCATGTGCTGCCACA
AAAAGTGCATAGTCAAGTGCCAGATGGCCACCGTCTGCGGTCCGGTTGAC
TGTACCGGCTCCATACCGGCAACCTCCTCCACTCCTTCAATGGCCAGCCG
ACCGGAGTTCACCATCACACAGGCCGACAATCCACAGATCGTTGATTCCA
GCACGGGTGCGACTCCGTTTGATGAGACGTCTGCTGCATCTGGCGGAGAT
CAGGGGCAAATTCAATCGCCAACGGCCTCTGGCTTGGATGTCCATCGATC
CAGCCTCACCGGGATGCTGGCCCAGGGCATCAAGCGGCAGGCGAGCAACT
TGGACATTCCCGGCATCGTATCCTCGCTAACTGGCAGTGGTCAGCAGGTG
AACTCCAAGAGCCTGCCTCCCAGTCCACAGCACACGCCATCGCGAAAATC
GTCGATTGTGGAAGAGGCGACTCCTGCTCTGCAGCAGAATCCTTTCGAGA
GCGTCACCCAGCACCTGGAGGCCCTGCCCTTGGACTGTCCGGAGCTCAGC
TTCGAGCAGGTGATCGTCATCACGGAGCCCATCATTCGTCACACCCGCAA
CGAGGATCTGATGAATCTGGCCAAGAGCACCAGCAAACTCCTATACGCTG
CCCTGCCGCCCGATGAGCGTGTGGCCAAGATAAACGAGTTGTTAACGAAA
CTGAAAGTAGCCCTGGATGCGGAGACCGAGGGCTATACGCTGATGAACGA
TGCGGAGAAGGCCACCGAATCCTCGCCCTGGAAATCGGACAGATCGGATG
AGCGTGTCCAGGCGCTCAGCATCATCATGCTGTACTTGTGCACGGGTCTG
CAACATGCCCAGGGTGTGGTGCTGCAGTAGAAGCTTTCTAGACCAT

BS15111.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:56:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG10362-RA 3114 CG10362-PA 1..3114 17..3130 15570 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:56:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG10362-RA 3776 CG10362-RA 337..3452 16..3131 15580 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:56:36
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11928233..11929509 1911..635 6385 100 Minus
X 23542271 X 11927322..11927957 2694..2059 3180 100 Minus
X 23542271 X 11930021..11930282 442..181 1310 100 Minus
X 23542271 X 11927006..11927257 2945..2694 1245 99.6 Minus
X 23542271 X 11929712..11929905 635..442 970 100 Minus
X 23542271 X 11926748..11926938 3131..2941 955 100 Minus
X 23542271 X 11930349..11930514 181..16 830 100 Minus
X 23542271 X 11928009..11928158 2061..1912 750 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:56:37 has no hits.

BS15111.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-12 09:37:30 Download gff for BS15111.complete
Subject Subject Range Query Range Percent Splice Strand
CG10362-RA 338..3451 17..3130 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:30:56 Download gff for BS15111.complete
Subject Subject Range Query Range Percent Splice Strand
CG10362-RA 338..3451 17..3130 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:39:13 Download gff for BS15111.complete
Subject Subject Range Query Range Percent Splice Strand
CG10362-RA 338..3451 17..3130 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:39:13 Download gff for BS15111.complete
Subject Subject Range Query Range Percent Splice Strand
X 11930349..11930513 17..181 100   Minus
X 11929712..11929904 443..635 100 <- Minus
X 11930021..11930281 182..442 100 <- Minus
X 11926749..11926937 2942..3130 100 <- Minus
X 11927010..11927256 2695..2941 100 <- Minus
X 11927322..11927954 2062..2694 100 <- Minus
X 11928009..11928158 1912..2061 100 <- Minus
X 11928233..11929508 636..1911 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:30:56 Download gff for BS15111.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11820782..11820970 2942..3130 100 <- Minus
arm_X 11821043..11821289 2695..2941 100 <- Minus
arm_X 11821355..11821987 2062..2694 100 <- Minus
arm_X 11822042..11822191 1912..2061 100 <- Minus
arm_X 11822266..11823541 636..1911 100 <- Minus
arm_X 11823745..11823937 443..635 100 <- Minus
arm_X 11824054..11824314 182..442 100 <- Minus
arm_X 11824382..11824546 17..181 100   Minus

BS15111.pep Sequence

Translation from 16 to 3129

> BS15111.pep
MEIPISNILLLCLIFLLIGGVVMILLQYLIFIKFSNLPDESEEQKQANAK
YTLPLNIKQTARNLKRLSNSGLGGGAGNGCENHQESLRRASALVSLNFVM
QFLFHEFKNSNRVRKWFYRKLSIELDELISKTTTGKLLDKLTIKELELGD
QFPDVKSLSVHNVELDKDEQRIENLDLLLDINYVGNFTTSIDADMVLGKK
GSITLRVKQLSGMARLQFTRKPYTHWSISFLGDPELILDIESKYQGRQMQ
SNITNLISNQIRKAVRRKHTLPNYKLRYKPFFHWTAEEDASDCDIQPNGL
LTVKLAELSRLMGYPGASETYCTITLAPVPFIEASQRDSRNVLISLDVFI
HKAKNQQIGIVFKQSGSQVVRIESVLPNTPACKSNLLAGDVLVAIEGRPV
TTIQQIAKVVKTLQATVFSLRIERIIPGIIRNDAILEDFEKYEDIGDLPS
SYPCQPKLETDEAATADPTPKHLVVKPSLSGTPTNSPKKSNLIAKAIKKT
MSRESGDKDRDKDKDKDKDKDKDKDKDKDKDKDKDKDKGKEEVEEPVNYF
YQHSTIDCPFSPLIHMEDVCSFQLDNSSRFLNVCVFGKSAGESVLLGYNN
VQIGQILVECSETSLNQCLKQISLNPASLQAVKTHPLSNQSGFNPNLCFG
DILFGFSWMGNPNLTVGDVPIKSTSKSQSPARNPLAGDRVASEDQSQFLK
LTSSMADSSTSGESSSGTTAAPRAHDFVRTHFHRATQCDFCGKKIWLKDA
MQCQECSMCCHKKCIVKCQMATVCGPVDCTGSIPATSSTPSMASRPEFTI
TQADNPQIVDSSTGATPFDETSAASGGDQGQIQSPTASGLDVHRSSLTGM
LAQGIKRQASNLDIPGIVSSLTGSGQQVNSKSLPPSPQHTPSRKSSIVEE
ATPALQQNPFESVTQHLEALPLDCPELSFEQVIVITEPIIRHTRNEDLMN
LAKSTSKLLYAALPPDERVAKINELLTKLKVALDAETEGYTLMNDAEKAT
ESSPWKSDRSDERVQALSIIMLYLCTGLQHAQGVVLQ*

BS15111.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:51:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG10362-PA 1037 CG10362-PA 1..1037 1..1037 5336 100 Plus
Fip1-PA 701 CG1078-PA 525..642 429..542 167 37 Plus
CG43921-PD 1449 CG43921-PD 352..412 469..538 167 51.4 Plus
CG43921-PB 1510 CG43921-PB 413..473 469..538 167 51.4 Plus
CG43921-PA 1768 CG43921-PA 671..731 469..538 167 51.4 Plus
Fip1-PA 701 CG1078-PA 593..641 497..545 164 59.2 Plus
Fip1-PA 701 CG1078-PA 602..643 499..541 164 72.1 Plus
Fip1-PA 701 CG1078-PA 606..643 508..545 164 76.3 Plus
CG43921-PD 1449 CG43921-PD 378..411 508..541 163 85.3 Plus
CG43921-PB 1510 CG43921-PB 439..472 508..541 163 85.3 Plus