Clone BS15125 Report

Search the DGRC for BS15125

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:151
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG6912-RA
Protein status:BS15125.pep: full length peptide match
Sequenced Size:1334

Clone Sequence Records

BS15125.3prime Sequence

822 bp (756 high quality bases) assembled on 2006-10-23

> BS15125.3prime
ATGGTCTAGAAAGCTTCTACTATCAGTTCTTGTTGCACCAATCCCAGATA
CATCCGTCCATTGCATTGCAACCAAATTCTCCAGGATAAATGCCACAAAA
GTCCTCGATATTCATGAAGGCACAGCTTCCTTTGGGACAGTAGTAACTGT
AGCAGCCCGGTGAGCACTTATCCCGCTGGTGATCCTTGCAGCCGGAGCAA
TCCAAAATGTCGCTCTCCTTGCAATCCGGCGTGCTGCACGCCAGAAGTGG
AGGATTTGGCGGCATGACCACTCGTTTCGCGTTTTCGTCATATACGACCT
TCGGTGGCTTGAGATATACCACCGGGGCCGTGCAGACTCTGGAATCGCAG
AACTTATTCTCCTTGTTGGAGCACACCCAGTTGGGCGCATAGTTGATGCA
GATGCGAGGGCTCTTTACAAAACAGCATTGCGGTGGAGGATGACGCCCCG
GAAAGACTTCATTAGCCGCCGACTGTTCCGTAGATGGCCTCAAACTGGGG
TATATCCAGGGACGTCTGGTTGTTGTTGTGGCTACGATGTTATCTATAGT
ATAGTCATAGCTCTTGTCGTTATCGGGATCATAGGGTGCGGATGTAATGT
ACTCCACACGATTTATATTTTCGCTGGTCACCGAGTACTTGTGCTCATTG
TGGATCACATTGTCAATCTCAAGGATAGTGGTGATAAATCCCGGTTGTTG
GCAGCGTTTTTGATACCACACGGTTCCCGCTGGGCATGCCAATGAAATGC
AACGGCCAGCCTTATATTCACCCTCCGAACAGACGATTTTCCTGCACTGC
GAGTCGAATTAAATCGATCCCG

BS15125.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:14:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG6912-PA 1302 CG6912-RA 497..1292 822..27 3955 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:28:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG6912-RA 1428 CG6912-RA 576..1381 822..17 3970 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:27:59
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15135499..15136110 211..822 3045 99.8 Plus
3R 32079331 3R 15135185..15135379 17..211 930 98.5 Plus
Blast to na_te.dros performed on 2015-02-13 15:28:01 has no hits.

BS15125.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:17:38 Download gff for BS15125.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6912-PA 497..1302 17..822 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:51:11 Download gff for BS15125.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6912-PA 497..1302 17..822 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:54:30 Download gff for BS15125.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6912-RA 552..1357 17..822 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:52:57 Download gff for BS15125.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6912-RA 576..1381 17..822 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:52:57 Download gff for BS15125.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 15135185..15135378 17..210 98 <- Plus
3R 15135499..15136110 211..822 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:54:30 Download gff for BS15125.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10960907..10961100 17..210 98 <- Plus
arm_3R 10961221..10961832 211..822 99   Plus

BS15125.5prime Sequence

798 bp (797 high quality bases) assembled on 2006-10-23

> BS15125.5prime
GAAGTTATCATTCGACATGCTTGTGAAGTCATTCAGATCGGCCCTGGTTG
CCTGCCTGATCACCCTTGTGCCTTGCGGAAGTGCTCAAGCATACATCGCG
AAGCCGACATCTCCGCAGGGATATCAGGATGTCAACGGCGTGTGGCAAAG
CTCTTTCGTTTGTCAAACAGGATATCAATTGAAAGCGGATGGAAAATGTT
ATCCACAGACTAACAAAACGTGCGGGCCTGGATACTTTCTTAGCATTGAT
GAACTATGCTATCGTACGAATCCTGAGCCTTGCCCGCTTGAATCGACGAC
CACTACTACTACGACAACAACAACAACAACAACAGAGCCCACTACCACAA
CAACAACGGCAGAGCCCACTACCACAACAACAACAACAGAGCCCACTACC
ACAACAACAACAACAGAGCCCACTACCACAACAACAACAACAGAGCCCAC
TACCACAACAACAACAACAACAACTGCGCCTCCCGTCATTACAGAACTGA
CTCGCTGTCCACCGGGATCGATTTACTTCGACTCGCAGTGCAGGAAAATC
GTCTGTTCGGAGGGTGAATATAAGGCTGGCCGTTGCATTTCATTGGCATG
CCCAGCGGGAACCGTGTGGTATCAAAAACGCTGCCAACAACCGGGATTTA
TCACCACTATCCTTGAGATTGACAATGTGATCCACAATGAGCACAAGTAC
TCGGTGACCAGCGAAAATATAAATCGTGTGGAGTACATTACATCCGCACC
CTATGATCCCGATAACGACAAGAGCTATGACTATACTATAGATAACAT

BS15125.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:14:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG6912-PA 1302 CG6912-RA 1..782 17..798 3910 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:52:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG6912-RA 1428 CG6912-RA 80..861 17..798 3910 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:52:54
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15135825..15136393 798..230 2845 100 Minus
3R 32079331 3R 15136842..15136925 100..17 420 100 Minus
3R 32079331 3R 15136709..15136780 171..100 360 100 Minus
3R 32079331 3R 15136471..15136533 231..169 315 100 Minus
Blast to na_te.dros performed on 2015-02-12 05:52:56 has no hits.

BS15125.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:17:39 Download gff for BS15125.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6912-PA 1..782 17..798 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:51:13 Download gff for BS15125.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6912-PA 1..782 17..798 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 06:29:46 Download gff for BS15125.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6912-RA 56..837 17..798 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:04:52 Download gff for BS15125.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6912-RA 80..861 17..798 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:04:52 Download gff for BS15125.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 15135825..15136392 231..798 100 <- Minus
3R 15136472..15136531 171..230 100 <- Minus
3R 15136710..15136779 101..170 100 <- Minus
3R 15136842..15136925 17..100 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 06:29:46 Download gff for BS15125.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10962194..10962253 171..230 100 <- Minus
arm_3R 10962432..10962501 101..170 100 <- Minus
arm_3R 10962564..10962647 17..100 100   Minus
arm_3R 10961547..10962114 231..798 100 <- Minus

BS15125.complete Sequence

1334 bp assembled on 2010-06-25

GenBank Submission: KX803514

> BS15125.complete
GAAGTTATCAGTCGACATGCTTGTGAAGTCATTCAGATCGGCCCTGGTTG
CCTGCCTGATCACCCTTGTGCCTTGCGGAAGTGCTCAAGCATACATCGCG
AAGCCGACATCTCCGCAGGGATATCAGGATGTCAACGGCGTGTGGCAAAG
CTCTTTCGTTTGTCAAACAGGATATCAATTGAAAGCGGATGGAAAATGTT
ATCCACAGACTAACAAAACGTGCGGGCCTGGATACTTTCTTAGCATTGAT
GAACTATGCTATCGTACGAATCCTGAGCCTTGCCCGCTTGAATCGACGAC
CACTACTACTACGACAACAACAACAACAACAACAGAGCCCACTACCACAA
CAACAACGGCAGAGCCCACTACCACAACAACAACAACAGAGCCCACTACC
ACAACAACAACAACAGAGCCCACTACCACAACAACAACAACAGAGCCCAC
TACCACAACAACAACAACAACAACTGCGCCTCCCGTCATTACAGAACTGA
CTCGCTGTCCACCGGGATCGATTTACTTCGACTCGCAGTGCAGGAAAATC
GTCTGTTCGGAGGGTGAATATAAGGCTGGCCGTTGCATTTCATTGGCATG
CCCAGCGGGAACCGTGTGGTATCAAAAACGCTGCCAACAACCGGGATTTA
TCACCACTATCCTTGAGATTGACAATGTGATCCACAATGAGCACAAGTAC
TCGGTGACCAGCGAAAATATAAATCGTGTGGAGTACATTACATCCGCACC
CTATGATCCCGATAACGACAAGAGCTATGACTATACTATAGATAACATCG
TAGCCACAACAACAACCAGACGTCCCTGGATATACCCCAGTTTGAGGCCA
TCTACGGAACAGTCGGCGGCTAATGAAGTCTTTCCGGGGCGTCATCCTCC
ACCGCAATGCTGTTTTGTAAAGAGCCCTCGCATCTGCATCAACTATGCGC
CCAACTGGGTGTGCTCCAACAAGGAGAATAAGTTCTGCGATTCCAGAGTC
TGCACGGCCCCGGTGGTATATCTCAAGCCACCGAAGGTCGTATATGACGA
AAACGCGAAACGAGTGGTCATGCCGCCAAATCCTCCACTTCTGGCGTGCA
GCACGCCGGATTGCAAGGAGAGCGACATTTTGGATTGCTCCGGCTGCAAG
GATCACCAGCGGGATAAGTGCTCACCGGGCTGCTACAGTTACTACTGTCC
CAAAGGAAGCTGTGCCTTCATGAATATCGAGGACTTTTGTGGCATTTATC
CTGGAGAATTTGGTTGCAATGCAATGGACGGATGTATCTGGGATTGGTGC
AACAAGAAGTGCTATTAGAAGCTTTCTAGACCAT

BS15125.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:48:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG6912-RA 1302 CG6912-PA 1..1302 17..1318 6510 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:48:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG6912-RA 1428 CG6912-RA 80..1381 17..1318 6510 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:48:09
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15135499..15136393 1124..230 4475 100 Minus
3R 32079331 3R 15135185..15135379 1318..1124 975 100 Minus
3R 32079331 3R 15136842..15136925 100..17 420 100 Minus
3R 32079331 3R 15136709..15136780 171..100 360 100 Minus
3R 32079331 3R 15136471..15136533 231..169 315 100 Minus
Blast to na_te.dros performed on 2014-11-28 08:48:10 has no hits.

BS15125.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-25 11:52:51 Download gff for BS15125.complete
Subject Subject Range Query Range Percent Splice Strand
CG6912-RA 56..1357 17..1318 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:51 Download gff for BS15125.complete
Subject Subject Range Query Range Percent Splice Strand
CG6912-RA 56..1357 17..1318 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:25:15 Download gff for BS15125.complete
Subject Subject Range Query Range Percent Splice Strand
CG6912-RA 80..1381 17..1318 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:25:15 Download gff for BS15125.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15135185..15135378 1125..1318 100 <- Minus
3R 15135499..15136392 231..1124 100 <- Minus
3R 15136472..15136531 171..230 100 <- Minus
3R 15136710..15136779 101..170 100 <- Minus
3R 15136842..15136925 17..100 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:51 Download gff for BS15125.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10962564..10962647 17..100 100   Minus
arm_3R 10960907..10961100 1125..1318 100 <- Minus
arm_3R 10961221..10962114 231..1124 100 <- Minus
arm_3R 10962194..10962253 171..230 100 <- Minus
arm_3R 10962432..10962501 101..170 100 <- Minus

BS15125.pep Sequence

Translation from 16 to 1317

> BS15125.pep
MLVKSFRSALVACLITLVPCGSAQAYIAKPTSPQGYQDVNGVWQSSFVCQ
TGYQLKADGKCYPQTNKTCGPGYFLSIDELCYRTNPEPCPLESTTTTTTT
TTTTTTEPTTTTTTAEPTTTTTTTEPTTTTTTTEPTTTTTTTEPTTTTTT
TTTAPPVITELTRCPPGSIYFDSQCRKIVCSEGEYKAGRCISLACPAGTV
WYQKRCQQPGFITTILEIDNVIHNEHKYSVTSENINRVEYITSAPYDPDN
DKSYDYTIDNIVATTTTRRPWIYPSLRPSTEQSAANEVFPGRHPPPQCCF
VKSPRICINYAPNWVCSNKENKFCDSRVCTAPVVYLKPPKVVYDENAKRV
VMPPNPPLLACSTPDCKESDILDCSGCKDHQRDKCSPGCYSYYCPKGSCA
FMNIEDFCGIYPGEFGCNAMDGCIWDWCNKKCY*

BS15125.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:04:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG6912-PA 433 CG6912-PA 1..433 1..433 2429 100 Plus
CG3984-PA 537 CG3984-PA 209..534 80..422 350 29.7 Plus
Muc96D-PA 881 CG31439-PA 333..406 93..166 265 73 Plus
CG34220-PA 726 CG34220-PA 272..347 84..162 259 70.9 Plus
CG34220-PA 726 CG34220-PA 58..151 65..162 256 60.2 Plus
Muc96D-PA 881 CG31439-PA 607..677 93..166 253 73 Plus
CG34220-PA 726 CG34220-PA 276..357 86..164 253 67.1 Plus
CG34220-PA 726 CG34220-PA 522..607 84..166 252 64 Plus
Muc96D-PA 881 CG31439-PA 215..284 93..162 251 74.3 Plus
Muc96D-PA 881 CG31439-PA 350..437 84..166 251 64.8 Plus
Muc96D-PA 881 CG31439-PA 77..239 21..166 250 41.6 Plus
Muc96D-PA 881 CG31439-PA 631..704 90..162 250 73 Plus
Muc96D-PA 881 CG31439-PA 574..658 90..166 249 64.7 Plus
Muc96D-PA 881 CG31439-PA 239..324 90..166 248 64 Plus
Muc96D-PA 881 CG31439-PA 224..293 93..162 245 72.9 Plus
Muc96D-PA 881 CG31439-PA 468..537 93..162 245 72.9 Plus
CG34220-PA 726 CG34220-PA 121..181 93..153 244 82 Plus
Muc96D-PA 881 CG31439-PA 406..492 86..166 243 62.1 Plus
Muc96D-PA 881 CG31439-PA 438..510 93..162 243 72.6 Plus
Muc96D-PA 881 CG31439-PA 492..574 90..165 243 66.3 Plus
CG34220-PA 726 CG34220-PA 112..181 93..162 243 72.9 Plus
Muc96D-PA 881 CG31439-PA 173..245 90..162 242 69.9 Plus
Muc96D-PA 881 CG31439-PA 291..363 90..162 242 69.9 Plus
Muc96D-PA 881 CG31439-PA 616..683 93..162 242 74.3 Plus
Muc96D-PA 881 CG31439-PA 182..266 93..166 241 63.5 Plus
Muc96D-PA 881 CG31439-PA 264..357 81..166 241 58.5 Plus
Muc96D-PA 881 CG31439-PA 300..384 93..166 241 63.5 Plus
Muc96D-PA 881 CG31439-PA 342..411 93..162 241 72.9 Plus
Muc96D-PA 881 CG31439-PA 422..498 93..162 241 68.8 Plus
Muc96D-PA 881 CG31439-PA 435..519 81..166 241 62.9 Plus
Muc96D-PA 881 CG31439-PA 517..631 61..165 241 51.3 Plus
CG34220-PA 726 CG34220-PA 46..126 81..162 241 66.7 Plus
CG34220-PA 726 CG34220-PA 68..163 65..162 241 57.6 Plus
Muc96D-PA 881 CG31439-PA 651..737 84..166 240 62.1 Plus
CG34220-PA 726 CG34220-PA 104..182 84..162 240 65.8 Plus
Muc96D-PA 881 CG31439-PA 462..544 86..166 239 63.9 Plus
Muc96D-PA 881 CG31439-PA 477..546 93..162 239 71.4 Plus
Muc96D-PA 881 CG31439-PA 568..637 93..162 239 71.4 Plus
Muc96D-PA 881 CG31439-PA 644..719 93..166 238 68.4 Plus
Muc96D-PA 881 CG31439-PA 343..412 93..162 237 71.4 Plus
Muc96D-PA 881 CG31439-PA 357..443 90..162 237 62.1 Plus
Muc96D-PA 881 CG31439-PA 478..550 93..162 237 71.2 Plus
Muc96D-PA 881 CG31439-PA 512..601 84..166 236 62.6 Plus
CG34220-PA 726 CG34220-PA 73..145 93..166 236 71.1 Plus
Muc96D-PA 881 CG31439-PA 380..462 84..166 235 61.4 Plus
CG34220-PA 726 CG34220-PA 106..189 81..164 235 60.7 Plus
CG34220-PA 726 CG34220-PA 299..369 93..166 235 68.9 Plus
CG34220-PA 726 CG34220-PA 513..597 86..166 235 61.4 Plus
Muc96D-PA 881 CG31439-PA 384..468 86..162 234 62.4 Plus
CG34220-PA 726 CG34220-PA 128..201 93..166 234 67.6 Plus
Muc96D-PA 881 CG31439-PA 207..272 94..162 233 73.9 Plus
Muc96D-PA 881 CG31439-PA 377..455 84..162 233 63.3 Plus
Muc96D-PA 881 CG31439-PA 625..727 65..166 232 54.4 Plus
CG34220-PA 726 CG34220-PA 125..197 93..165 232 68.5 Plus
Muc96D-PA 881 CG31439-PA 177..246 93..162 231 70 Plus
Muc96D-PA 881 CG31439-PA 295..364 93..162 231 70 Plus
Muc96D-PA 881 CG31439-PA 486..580 65..162 231 55.1 Plus
Muc96D-PA 881 CG31439-PA 568..665 65..162 230 54.1 Plus
Muc96D-PA 881 CG31439-PA 205..273 94..162 228 71 Plus
Muc96D-PA 881 CG31439-PA 456..562 65..162 227 53.3 Plus
Muc96D-PA 881 CG31439-PA 595..696 65..164 225 54.9 Plus
Hmu-PA 579 CG3373-PA 425..531 70..166 225 54.2 Plus
Muc96D-PA 881 CG31439-PA 191..268 93..162 224 65.4 Plus
Muc96D-PA 881 CG31439-PA 200..309 65..162 224 51.8 Plus
Muc96D-PA 881 CG31439-PA 309..386 93..162 224 65.4 Plus
Muc96D-PA 881 CG31439-PA 652..762 65..165 224 50.5 Plus
CG34220-PA 726 CG34220-PA 95..172 93..162 224 65.4 Plus
Muc96D-PA 881 CG31439-PA 233..331 65..162 220 53.5 Plus
Muc96D-PA 881 CG31439-PA 691..771 84..164 204 55.8 Plus
CG34220-PA 726 CG34220-PA 27..110 83..162 198 56.5 Plus
CG34220-PA 726 CG34220-PA 256..338 84..162 191 54.2 Plus
CG34220-PA 726 CG34220-PA 549..618 93..166 190 62.7 Plus
CG34220-PA 726 CG34220-PA 138..219 84..160 186 55.4 Plus
CG34220-PA 726 CG34220-PA 503..580 85..162 181 52.6 Plus
CG34220-PA 726 CG34220-PA 424..562 84..162 176 39.6 Plus
CG34220-PA 726 CG34220-PA 415..483 86..156 175 56.3 Plus
CG34220-PA 726 CG34220-PA 555..624 93..162 173 58.3 Plus
CG34220-PA 726 CG34220-PA 493..576 84..162 170 51.2 Plus
CG34220-PA 726 CG34220-PA 319..380 95..156 168 58.1 Plus
CG34220-PA 726 CG34220-PA 410..479 88..155 161 54.3 Plus
CG34220-PA 726 CG34220-PA 231..320 86..166 160 47.4 Plus
CG34220-PA 726 CG34220-PA 320..385 90..155 158 51.5 Plus