Clone Sequence Records
BS15130.complete Sequence
875 bp assembled on 2010-04-20
GenBank Submission: KX803184
> BS15130.complete
GAAGTTATCAGTCGACATGTCGGCTCTCAATCTGACCGTGCGCGTGCACC
CGGTGGTGCTTTTCCAGGTGGTGGACGCCTTCGAGCGGCGGAACGCGGAC
TCGCACCGCGTCATCGGCACCCTGCTCGGCTCTGTGGACAAAGGTGTGGT
GGAGGTTACCAACTGTTTCTGTGTGCCGCACAAGGAGCACGATGACCAGG
TGGAGGCAGAGCTGAGCTACGCCCTGGACATGTACGACCTCAACCGCAAG
GTGAACTCCAACGAGAGCGTGGTAGGCTGGTGGGCCACCGGCAACGACGT
TACCAACCACAGCTCGGTGATCCACGAGTATTACGCCCGCGAATGCAACA
ACCCGGTTCACCTCACCGTGGACACTTCGCTGCAGGGCGGACGTATGGGT
CTGCGTGCTTATGTCTGCATTCAACTAGGAGTTCCCGGCGGCAAGAGCGG
CTGCATGTTCACGCCCATTCCTGTCGAGCTGACCAGCTACGAGCCGGAGA
CATTTGGGCTCAAGCTGCTTCAGAAGACCGTAGGCGTTTCGCCCGCTCAC
CGTCCCAAGACCGTTCCGCCAATGCTGGACCTGGCCCAAATCTCGGAGGC
CTCCACGAAGCTGCAGTCCCTGCTGGATCTTATTCTCAAGTACGTTGACG
ACGTGATCGCTCACAAGGTAACCCCCGACAACGCCGTCGGACGCCAGCTG
CTAGACCTTATCCACTCCGTGCCGCACATGACCCACGAGCAGTTCACTCA
GATGTTCAACGCCAACGTACGCAACCTTCTGCTGGTCATCACGCTCTCCC
AGCTCATCAAAACCCAGCTGCAGCTTAACGAAAAGCTCACCTTCCTGCCC
ACCGCCTAGAAGCTTTCTAGACCAT
BS15130.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:25:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9769-RA | 843 | CG9769-PA | 1..843 | 17..859 | 4215 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:25:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9769-RA | 1301 | CG9769-RA | 97..942 | 16..861 | 4230 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:25:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4713241..4714086 | 861..16 | 4230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:25:27 has no hits.
BS15130.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-20 14:40:18 Download gff for
BS15130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9769-RA | 112..954 | 17..859 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:53:32 Download gff for
BS15130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9769-RA | 98..940 | 17..859 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:25:10 Download gff for
BS15130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9769-RA | 98..940 | 17..859 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:25:10 Download gff for
BS15130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4713243..4714085 | 17..859 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:53:32 Download gff for
BS15130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 538965..539807 | 17..859 | 100 | | Minus |
BS15130.3prime Sequence
822 bp (730 high quality bases) assembled on 2006-10-24
> BS15130.3prime
ATGGTCTAGAAAGCTTCTCCGTGGTGGGCAGGAAGGTGAGCTTTTCGTTA
AGCTGCAGCTGGGTTTTGATGAGCTGGGAGAGCGTGATGACCACCTCAAG
GTTGCGTACGTTGGCGTTGAACATCTGAGTGAACTGCTCGTGGGTCATGT
GCGGCACGGAGTGGATAAGGTCTAGCAGCTGGCGTCCGACGGCGTTGTCG
GGGGTTACCTTGTGAGCGATCACGTCGTCAACGTACTTGAGAATAAGATC
CAGCAGGGACTGCAGCTTCGTGGAGGCCTCCGAGATTTGGGCCAGGTCCA
GCATTGGCGGAACGGTCTTGGGACGGTGAGCGGGCGAAACGCCTACGGTC
TTCTGAAGCAGCTTGAGCCCAAATGTCTCCGGCTCGTAGCTGGTCAGCTC
GACAGGAATGGGCGTGAACATGCAGCCGCTCTTGCCGCCGGGAACTCCTA
GTTGAATGCAGACATAAGCACGCAGACCCATACGTCCGCCCTGCAGCGAA
GTGTCCACGGTGAGGTGAACCGGGTTGTTGCATTCGCGGGCGTAATACTC
GTGGATCACCGAGCTGTGGTTGGTAACGTCGTTGCCGGTGGCCCACCAGC
CTACCACGCTCTCGTTGGAGTTCACCTTGCGGTTGAGGTCGTACATGTCC
AGGGCGTAGCTCAGCTCTGCCTCCACCTGGTCATCGTGCTCCTTGTGCGG
CACACAGAAACAGTTGGTAACCTCCACCACACCTTTGTCCACAGAGCCGA
GCAGGGTGCCGATGACGCGGTGCGAGTCCGCGTTCCGCCGCTCGAAGGCG
TCCACCACCCTGGAAAAGCACC
BS15130.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:14:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9769-PA | 843 | CG9769-RA | 51..762 | 809..98 | 3560 | 100 | Minus |
| CG9769-PA | 843 | CG9769-RA | 767..837 | 93..23 | 355 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:44:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9769-RA | 1301 | CG9769-RA | 136..934 | 822..23 | 3930 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:44:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4713249..4714047 | 23..822 | 3905 | 99.5 | Plus |
Blast to na_te.dros performed on 2015-02-13 12:44:35 has no hits.
BS15130.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:17:46 Download gff for
BS15130.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9769-PA | 39..843 | 17..822 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:51:20 Download gff for
BS15130.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9769-PA | 39..843 | 17..822 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:04:13 Download gff for
BS15130.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9769-RA | 136..942 | 15..822 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:22:59 Download gff for
BS15130.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9769-RA | 136..942 | 15..822 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:22:59 Download gff for
BS15130.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4713241..4714047 | 15..822 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:04:13 Download gff for
BS15130.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 538963..539769 | 15..822 | 99 | | Plus |
BS15130.5prime Sequence
827 bp (798 high quality bases) assembled on 2006-10-23
> BS15130.5prime
GAAGTTATCAGTCGACATGTCGGCTCTCAATCTGACCGTGCGCGTGCACC
CGGTGGTGCTTTTCCAGGTGGTGGACGCCTTCGAGCGGCGGAACGCGGAC
TCGCACCGCGTCATCGGCACCCTGCTCGGCTCTGTGGACAAAGGTGTGGT
GGAGGTTACCAACTGTTTCTGTGTGCCGCACAAGGAGCACGATGACCAGG
TGGAGGCAGAGCTGAGCTACGCCCTGGACATGTACGACCTCAACCGCAAG
GTGAACTCCAACGAGAGCGTGGTAGGCTGGTGGGCCACCGGCAACGACGT
TACCAACCACAGCTCGGTGATCCACGAGTATTACGCCCGCGAATGCAACA
ACCCGGTTCACCTCACCGTGGACACTTCGCTGCAGGGCGGACGTATGGGT
CTGCGTGCTTATGTCTGCATTCAACTAGGAGTTCCCGGCGGCAAGAGCGG
CTGCATGTTCACGCCCATTCCTGTCGAGCTGACCAGCTACGAGCCGGAGA
CATTTGGGCTCAAGCTGCTTCAGAAGACCGTAGGCGTTTCGCCCGCTCAC
CGTCCCAAGACCGTTCCGCCAATGCTGGACCTGGCCCAAATCTCGGAGGC
CTCCACGAAGCTGCAGTCCCTGCTGGATCTTATTCTCAAGTACGTTGACG
ACGTGATCGCTCACAAGGTAACCCCCGACAACGCCGTCGGACGCCAGCTG
CTAGACCTTATCCACTCCGTGCCGCACATGACCCACGAGCAGTTCACTCA
GATGTTCAACGCCAACGTACGCAACCTTCTGCTGGTCATCACGCTCTCCC
AGCTCATCAAAACCCAGCTGCAGCTTA
BS15130.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:14:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9769-PA | 843 | CG9769-RA | 1..811 | 17..827 | 4055 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:53:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9769-RA | 1301 | CG9769-RA | 97..908 | 16..827 | 4060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:53:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4713275..4714086 | 827..16 | 4060 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 05:53:35 has no hits.
BS15130.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:17:47 Download gff for
BS15130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9769-PA | 1..810 | 17..826 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:51:21 Download gff for
BS15130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9769-PA | 1..810 | 17..826 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 06:29:54 Download gff for
BS15130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9769-RA | 97..907 | 16..826 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:06:44 Download gff for
BS15130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9769-RA | 97..907 | 16..826 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:06:44 Download gff for
BS15130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4713276..4714086 | 16..826 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 06:29:54 Download gff for
BS15130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 538998..539808 | 16..826 | 100 | | Minus |
BS15130.pep Sequence
Translation from 16 to 858
> BS15130.pep
MSALNLTVRVHPVVLFQVVDAFERRNADSHRVIGTLLGSVDKGVVEVTNC
FCVPHKEHDDQVEAELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSS
VIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTP
IPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKLQ
SLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNAN
VRNLLLVITLSQLIKTQLQLNEKLTFLPTA*
BS15130.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:19:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9769-PA | 280 | CG9769-PA | 1..280 | 1..280 | 1453 | 100 | Plus |
| CG8335-PA | 286 | CG8335-PA | 7..281 | 3..275 | 596 | 40.1 | Plus |
| Rpn8-PC | 338 | CG3416-PC | 11..276 | 8..271 | 259 | 28.7 | Plus |
| Rpn8-PA | 338 | CG3416-PA | 11..276 | 8..271 | 259 | 28.7 | Plus |
| Rpn8-PB | 358 | CG3416-PB | 11..276 | 8..271 | 259 | 28.7 | Plus |
