Clone BS15143 Report

Search the DGRC for BS15143

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:151
Well:43
Vector:pDNR-Dual
Associated Gene/TranscriptJon65Ai-RA
Protein status:BS15143.pep: full length peptide match
Sequenced Size:821

Clone Sequence Records

BS15143.complete Sequence

821 bp assembled on 2010-02-09

GenBank Submission: KX806024

> BS15143.complete
GAAGTTATCAGTCGACATGAAGGTGCTAGCGGTCCTACTTTTGGGGGTGA
TTGCCTCCGCCACGGCGTTCGAGAAGCCGGTTTTCTGGAAGGATGTGCCC
GTGGGCAAGGCCTCGATCGAAGGTAGGATCACCATGGGATATCCTGCCTA
CGAAGGCAAGGTGCCCTACATTGTCGGTTTGGGCTTCAGCAAGAACGGTG
GAGGCACCTGGTGCGGCGGTTCCATTATCGGCAACACCTGGGTGATGACC
GCCAAGCATTGTACCGATGGCATGGAATCGGTGACCATCTACTACGGAGC
CCTCTGGCGCCTGCAGGCACAGTACACCCACTGGGTGGGACGTAGCGACT
TCATTGAGCACGGATCTGGAGACATCTCCCTCATTCGCACTCCCCACGTA
GACTTCTGGTCGCTGGTCAACAAGGTGGAGCTCCCCAGGTACGACGATCG
CTACAACAACTACCAAGGCTGGTGGGCTCTGGTCTCCGGATGGGGCAAGA
CCTCCGATGAGGGCGGTGTCTCCGAGTACCTGAACTGCGTCGATGTCCAG
ATTGGCGAAAACTCCGTGTGCGAGAACTACTACGGCAGCTTCTCCGGCGA
CCTAATCTGCATCCCCACTCCCGAGAACAAGGGCACCTGCAGCGGCGACT
CCGGTGGCCCACTGGTCATCCACGACGGCAACCGCCAGGTGGGCATTGTG
TCCTTCGGCTCCTCCGCCGGCTGCCTCTCCAACGGTCCCAAGGGTATGGT
GCGCGTCACCAGCTACCTGGACTGGATCCGCGACAACACTGGCATCTCTT
ATTAAAAGCTTTCTAGACCAT

BS15143.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:22:31
Subject Length Description Subject Range Query Range Score Percent Strand
Jon65Ai-RB 789 CG10475-PB 1..789 17..805 3945 100 Plus
Jon65Ai-RA 789 CG10475-PA 1..789 17..805 3945 100 Plus
Jon65Aii-RA 780 CG6580-PA 340..780 371..805 760 78.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:22:32
Subject Length Description Subject Range Query Range Score Percent Strand
Jon65Ai-RB 951 CG10475-RB 26..818 15..807 3965 100 Plus
Jon65Ai-RA 860 CG10475-RA 26..818 15..807 3965 100 Plus
Jon65Aii-RA 833 CG6580-RA 369..809 371..805 760 78.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:22:29
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6053626..6054418 807..15 3965 100 Minus
3L 28110227 3L 6052751..6053191 371..805 760 78.7 Plus
3L 28110227 3L 8391807..8392021 281..495 385 78.6 Plus
2L 23513712 2L 4952785..4953004 331..112 350 77.3 Minus
2R 25286936 2R 8691844..8692188 371..709 340 73.9 Plus
3L 28110227 3L 8393171..8393378 495..288 290 76 Minus
3R 32079331 3R 30487393..30487531 509..371 290 80.6 Minus
3R 32079331 3R 30489360..30489498 371..509 290 80.6 Plus
3R 32079331 3R 29922608..29922746 371..509 275 79.9 Plus
3R 32079331 3R 29924083..29924221 509..371 275 79.9 Minus
3R 32079331 3R 29922868..29923039 634..805 260 76.7 Plus
3R 32079331 3R 29923790..29923961 805..634 260 76.7 Minus
3R 32079331 3R 30487094..30487271 811..634 245 75.8 Minus
2L 23513712 2L 4950300..4950403 477..374 235 81.7 Minus
2L 23513712 2L 4952555..4952724 540..371 235 75.9 Minus
2L 23513712 2L 4952284..4952337 805..752 225 94.4 Minus
2L 23513712 2L 4954670..4954757 458..371 215 83 Minus
Blast to na_te.dros performed on 2014-11-28 04:22:31 has no hits.

BS15143.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:16:50 Download gff for BS15143.complete
Subject Subject Range Query Range Percent Splice Strand
Jon65Ai-RA 1..789 17..805 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:09:31 Download gff for BS15143.complete
Subject Subject Range Query Range Percent Splice Strand
Jon65Ai-RA 11..797 17..803 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:57:49 Download gff for BS15143.complete
Subject Subject Range Query Range Percent Splice Strand
Jon65Ai-RA 28..814 17..803 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:40:55 Download gff for BS15143.complete
Subject Subject Range Query Range Percent Splice Strand
Jon65Ai-RA 11..797 17..803 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:27:00 Download gff for BS15143.complete
Subject Subject Range Query Range Percent Splice Strand
Jon65Ai-RA 28..814 17..803 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:27:00 Download gff for BS15143.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6053630..6054416 17..803 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:57:49 Download gff for BS15143.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6046730..6047516 17..803 100   Minus

BS15143.3prime Sequence

819 bp (749 high quality bases) assembled on 2006-10-23

> BS15143.3prime
ATGGTCTAGAAAGCTTTTACTTAGAGATGCCAGTGTTGTCGCGGATCCAG
TCCAGGTAGCTGGTGACGCGCACCATACCCTTGGGACCGTTGGACAGGCA
GCCGGCGGAGGAGCCGAAGGACACAATGCCCACCTGGCGGTTGCCGTCGT
GGATGACCAGTGGGCCACCGGAGTCGCCGCTGCAGGTGCCCTTGTTCTCG
GGAGTGGGGATGCAGATTAGGTCGCCGGAGAAGCTGCCGTAGTAGTTCTC
GCACACGGAGTTTTCGCCAATCTGGACATCGACGCAGTTCAGGTACTCGG
AGACACCGCCCTCATCGGAGGTCTTGCCCCATCCGGAGACCAGAGCCCAC
CAGCCTTGGTAGTTGTTGTAGCGATCGTCGTACCTGGGGAGCTCCACCTT
GTTGACCAGCGACCAGAAGTCTACGTGGGGAGTGCGAATGAGGGAGATGT
CTCCAGATCCGTGCTCAATGAAGTCGCTACGTCCCACCCAGTGGGTGTAC
TGTGCCTGCAGGCGCCAGAGGGCTCCGTAGTAGATGGTCACCGATTCCAT
GCCATCGGTACAATGCTTGGCGGTCATCACCCAGGTGTTGCCGATAATGG
AACCGCCGCACCAGGTGCCTCCACCGTTCTTGCTGAAGCCCAAACCGACA
ATGTAGGGCACCTTGCCTTCGTAGGCAGGATATCCCATGGTGATCCTACC
TTCGATCGAGGCCTTGCCCACGGGCACATCCTTCCAGAAAACCGGCTTCT
CGAACGCCGTGGCGGAGGCAATCACCCCCAAAAGTAGGACCGCTAGCACC
TTCATGTCGACTGATAACT

BS15143.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:14:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG10475-PA 789 Jon65Ai-RA 1..783 805..23 3890 99.8 Minus
CG6580-PA 780 Jon65Aii-RA 355..465 436..326 305 90.9 Minus
CG6580-PA 780 Jon65Aii-RA 590..708 207..89 270 89 Minus
CG8869-PA 831 Jon25Bii-RA 778..824 70..24 210 97.8 Minus
CG31034-PA 798 Jon99Cii-RA 745..791 70..24 160 93.6 Minus
CG31362-PA 798 Jon99Ciii-RA 745..791 70..24 160 93.6 Minus
CG8869-PA 831 Jon25Bii-RA 139..190 682..631 135 90.3 Minus
CG8579-PA 816 Jon44E-RA 532..558 295..269 135 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:16:45
Subject Length Description Subject Range Query Range Score Percent Strand
Jon65Ai-RB 951 CG10475-RB 26..818 807..15 3920 99.6 Minus
Jon65Ai-RA 860 CG10475-RA 26..818 807..15 3920 99.6 Minus
Jon65Aii-RA 833 CG6580-RA 369..803 451..23 790 79.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:16:36
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6053626..6054418 15..807 3920 99.6 Plus
3L 28110227 3L 6052751..6053185 451..23 760 78.9 Minus
3L 28110227 3L 8391807..8392021 541..327 385 78.6 Minus
2L 23513712 2L 4952785..4953004 491..710 350 77.3 Plus
2R 25286936 2R 8691844..8692188 451..113 340 73.9 Minus
3L 28110227 3L 8393171..8393378 327..534 290 76 Plus
2L 23513712 2L 4950300..4950403 345..448 235 81.7 Plus
2L 23513712 2L 4952555..4952724 282..451 235 75.9 Plus
2L 23513712 2L 4952291..4952337 24..70 220 97.9 Plus
2L 23513712 2L 4954670..4954757 364..451 215 83 Plus
Blast to na_te.dros performed on 2015-02-10 22:16:40 has no hits.

BS15143.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:18:10 Download gff for BS15143.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10475-PA 1..789 17..805 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:51:50 Download gff for BS15143.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10475-PA 1..789 17..805 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 11:20:34 Download gff for BS15143.3prime
Subject Subject Range Query Range Percent Splice Strand
Jon65Ai-RA 22..818 15..812 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:05:23 Download gff for BS15143.3prime
Subject Subject Range Query Range Percent Splice Strand
Jon65Ai-RA 22..818 15..812 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:05:23 Download gff for BS15143.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 6053632..6054422 22..812 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 11:20:34 Download gff for BS15143.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6046732..6047522 22..812 99   Plus

BS15143.5prime Sequence

818 bp (774 high quality bases) assembled on 2006-10-23

> BS15143.5prime
GAAGTTATCAGTCGACATGAAGGTGCTAGCGGTCCTACTTTTGGGGGTGA
TTGCCTCCGCCACGGCGTTCGAGAAGCCGGTTTTCTGGAAGGATGTGCCC
GTGGGCAAGGCCTCGATCGAAGGTAGGATCACCATGGGATATCCTGCCTA
CGAAGGCAAGGTGCCCTACATTGTCGGTTTGGGCTTCAGCAAGAACGGTG
GAGGCACCTGGTGCGGCGGTTCCATTATCGGCAACACCTGGGTGATGACC
GCCAAGCATTGTACCGATGGCATGGAATCGGTGACCATCTACTACGGAGC
CCTCTGGCGCCTGCAGGCACAGTACACCCACTGGGTGGGACGTAGCGACT
TCATTGAGCACGGATCTGGAGACATCTCCCTCATTCGCACTCCCCACGTA
GACTTCTGGTCGCTGGTCAACAAGGTGGAGCTCCCCAGGTACGACGATCG
CTACAACAACTACCAAGGCTGGTGGGCTCTGGTCTCCGGATGGGGCAAGA
CCTCCGATGAGGGCGGTGTCTCCGAGTACCTGAACTGCGTCGATGTCCAG
ATTGGCGAAAACTCCGTGTGCGAGAACTACTACGGCAGCTTCTCCGGCGA
CCTAATCTGCATCCCCACTCCCGAGAACAAGGGCACCTGCAGCGGCGACT
CCGGTGGCCCACTGGTCATCCACGACGGCAACCGCCAGGTGGGCATTGTG
TCCTTCGGCTCCTCCGCCGGCTGCCTCTCCAACGGTCCCAAGGGTATGGT
GCGCGTCACCAGCTACCTGGACTGGATCCGCGACAACACTGGCATCTCTT
ATTAAAGCTTTCTAGACC

BS15143.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:14:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG10475-PA 789 Jon65Ai-RA 1..789 17..805 3945 100 Plus
CG6580-PA 780 Jon65Aii-RA 355..465 386..496 305 90.9 Plus
CG6580-PA 780 Jon65Aii-RA 590..708 615..733 245 88.2 Plus
CG8869-PA 831 Jon25Bii-RA 778..824 752..798 210 97.8 Plus
CG31034-PA 798 Jon99Cii-RA 745..791 752..798 160 93.6 Plus
CG31362-PA 798 Jon99Ciii-RA 745..791 752..798 160 93.6 Plus
CG8869-PA 831 Jon25Bii-RA 139..190 140..191 135 90.3 Plus
CG8579-PA 816 Jon44E-RA 532..558 527..553 135 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:53:08
Subject Length Description Subject Range Query Range Score Percent Strand
Jon65Ai-RB 951 CG10475-RB 26..817 15..806 3960 100 Plus
Jon65Ai-RA 860 CG10475-RA 26..817 15..806 3960 100 Plus
Jon65Aii-RA 833 CG6580-RA 369..809 371..805 790 79.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:53:02
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6053627..6054418 806..15 3960 100 Minus
3L 28110227 3L 6052751..6053191 371..805 760 78.7 Plus
3L 28110227 3L 8391807..8392021 281..495 385 78.6 Plus
2L 23513712 2L 4952785..4953004 331..112 350 77.3 Minus
2R 25286936 2R 8691844..8692188 371..709 340 73.9 Plus
3L 28110227 3L 8393171..8393378 495..288 290 76 Minus
2L 23513712 2L 4950300..4950403 477..374 235 81.7 Minus
2L 23513712 2L 4952555..4952724 540..371 235 75.9 Minus
2L 23513712 2L 4952284..4952337 805..752 225 94.4 Minus
2L 23513712 2L 4954670..4954757 458..371 215 83 Minus
Blast to na_te.dros performed on 2015-02-12 05:53:05 has no hits.

BS15143.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:18:11 Download gff for BS15143.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10475-PA 1..789 17..805 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:51:52 Download gff for BS15143.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10475-PA 1..789 17..805 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 06:29:48 Download gff for BS15143.5prime
Subject Subject Range Query Range Percent Splice Strand
Jon65Ai-RA 22..817 10..806 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:05:27 Download gff for BS15143.5prime
Subject Subject Range Query Range Percent Splice Strand
Jon65Ai-RA 22..817 10..806 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:05:27 Download gff for BS15143.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 6053627..6054422 10..806 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 06:29:48 Download gff for BS15143.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6046727..6047522 10..806 99   Minus

BS15143.pep Sequence

Translation from 16 to 804

> BS15143.pep
MKVLAVLLLGVIASATAFEKPVFWKDVPVGKASIEGRITMGYPAYEGKVP
YIVGLGFSKNGGGTWCGGSIIGNTWVMTAKHCTDGMESVTIYYGALWRLQ
AQYTHWVGRSDFIEHGSGDISLIRTPHVDFWSLVNKVELPRYDDRYNNYQ
GWWALVSGWGKTSDEGGVSEYLNCVDVQIGENSVCENYYGSFSGDLICIP
TPENKGTCSGDSGGPLVIHDGNRQVGIVSFGSSAGCLSNGPKGMVRVTSY
LDWIRDNTGISY*

BS15143.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:58:28
Subject Length Description Subject Range Query Range Score Percent Strand
Jon65Ai-PB 262 CG10475-PB 1..262 1..262 1440 100 Plus
Jon65Ai-PA 262 CG10475-PA 1..262 1..262 1440 100 Plus
Jon65Aii-PA 259 CG6580-PA 1..259 1..262 951 67.4 Plus
Jon44E-PB 271 CG8579-PB 10..271 4..262 864 63.1 Plus
Jon44E-PA 271 CG8579-PA 10..271 4..262 864 63.1 Plus