Clone BS15148 Report

Search the DGRC for BS15148

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:151
Well:48
Vector:pDNR-Dual
Associated Gene/TranscriptCG16727-RA
Protein status:BS15148.pep: full length peptide match
Sequenced Size:1670

Clone Sequence Records

BS15148.complete Sequence

1670 bp assembled on 2009-12-07

GenBank Submission: KX800257

> BS15148.complete
GAAGTTATCAGTCGACATGGATTTCGACCGCGTGCTTGAGAAGTGCGGAA
ACTTCGGAAGATTTCAGTTTGTCATTCTAATTCTCTACGGCTACACGAAC
ATTCTTAGTTCGTTGCACTATTTCTCACAGACCCTTATTACTTTTACACC
CGAGCATTGGTGTTCCCACGATGACCTAATGGGCTTGGGTGCCGCGGAGC
TGCGATCCATTTACTCCAACGTTTCGCACCCCTCCTGCACTCTTCTCTCC
GAGGTGATCAATGGAACTGGAGTGGCCTCCGAAGAGTCCTGTCAAGACTG
GATCTTCGAGCGGGAGAACGGCTACGAGAGTCTAACCACTGAACTGAAAT
GGGTCTGCGACAAATCCCATCAGCCGGCGGTGGGTCAATCCTTCTTCTTC
CTGGGCTCGGTGGTGGGCACCATTTCCTTTGGATTTCTTTCTGACCACAT
TGGAAGATTGCCGGCCATGCTGATGGCGGCTCTATCCGGTGCAACTGGTG
ACTTTATTACCTCGTTTGTGCACACGCTACCCTGGTTCGCCTTCTCGAGA
TTTGTGTCAGGACTGTCCACGGATACCATGTACTACCTTATGTACATCTT
GGTCTTCGAGTACCTGAGTCCCAAGCGTCGTACCTTTGGTCTGAACATCA
TCCTGGCTGTATTCTACTGCTTTGGACTGATGACCTCGCCCTGGATCGCC
ATGTGGATTGGCAACTGGCGTCGCTACCTCTGGTTGGCATCTCTTCCAGC
CCTAGGAGTTCTAATTTACCCCCTCCTGATCTGCGAAAGTGCTCAGTGGC
TGCTGACCAAGAAGAAGTACGATGAGGCGGTGGCATGTCTGAAGAAAGTG
GCCAAGTTTAATGGCCGCCAAGTTGAGGATTCTGTGTTTGATGAGTTCGT
AAAGCATTATCGCGAGAAAATGAACGAGGAGAGCAAGTTGAACAAGCAAA
TGGATACATTCCTAGGAATGTTCAAGACTCCCAGATTGCGTCGCTTCACC
ACCACATTGCTGGTTAAATCGGTCATCATCACGCTATCCTACGACGTGAT
CAACAGGAACATGGAAGGGCTGGGCTCTTCGCCCTTTAAGCTCTTTTCGC
TAACCTCCAGTGTTTACCTACCAGCTGGTTTCACCATCTTACTGCTGCAG
AACAAGATTGGGCGGAAGGGCATGGCATGTGGAGCACTGCTGGTGGGAGC
TATTATAACCGCTGTCACCGGATTCCTGATCGCAGTACTGGATCCCAGTG
AGAATGCTGTCCTGCTGGCCCTAATGGTGGGTCTGGGTCGCTTTGGCACA
ACGGTTTCCTACGATGCAGAGATCCAGTACGCAGCGGAAATCATTCCGAC
CAGTGTGCGCGGACAGGCGGTGTCCAACATCCATGTGGTTGGATTGGCCT
CCAGCTCACTGGCCTTCTATGTGATCTACCTGGCACAATACTACAAGCCC
CTGCCCTCGATCTTCATCAGCGTTCTAATGTTCCTAGGTGCTCTACTCTG
CCTGACCCTTCCCGAAACGCTTCACAAAAAACTACCCGAAACCCTGGCCG
ATGGTGAGCGCTTTGCAATGAACGAGAGCTGCCTGTACTTCCCATGCTTA
CACAAACGCCGCGAAAGTCTGACCGAGCATGAGGACCGAAAGTCTGAACC
CTAGAAGCTTTCTAGACCAT

BS15148.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:49:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG16727-RA 1638 CG16727-PA 1..1638 17..1654 8190 100 Plus
CG7333-RB 1626 CG7333-PB 299..1577 312..1590 2165 78 Plus
CG17752-RA 1617 CG17752-PA 543..882 586..925 395 74.4 Plus
CG7333-RB 1626 CG7333-PB 70..161 86..177 205 81.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:49:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG16727-RA 2014 CG16727-RA 120..1759 16..1655 8200 100 Plus
CG7333-RB 1698 CG7333-RB 338..1616 312..1590 2165 78 Plus
CG17752-RA 1716 CG17752-RA 585..924 586..925 395 74.4 Plus
CG7333-RB 1698 CG7333-RB 109..200 86..177 205 81.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:49:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19614828..19615334 1021..1527 2535 100 Plus
3R 32079331 3R 19613853..19614296 159..602 2220 100 Plus
3R 32079331 3R 19614354..19614773 602..1021 2100 100 Plus
3R 32079331 3R 19601922..19602371 1022..1471 825 78.9 Plus
3R 32079331 3R 19601445..19601740 602..897 775 84.1 Plus
3R 32079331 3R 19613500..19613645 16..161 730 100 Plus
3R 32079331 3R 19615402..19615529 1528..1655 640 100 Plus
3R 32079331 3R 19601130..19601385 347..602 560 81.2 Plus
3R 32079331 3R 19611206..19611526 605..925 345 73.8 Plus
3R 32079331 3R 19600743..19600819 86..162 190 83.1 Plus
Blast to na_te.dros performed on 2014-11-28 01:49:32 has no hits.

BS15148.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:41:50 Download gff for BS15148.complete
Subject Subject Range Query Range Percent Splice Strand
CG16727-RA 121..1758 17..1654 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:58:53 Download gff for BS15148.complete
Subject Subject Range Query Range Percent Splice Strand
CG16727-RA 121..1758 17..1654 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:26:36 Download gff for BS15148.complete
Subject Subject Range Query Range Percent Splice Strand
CG16727-RA 121..1758 17..1654 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:57:45 Download gff for BS15148.complete
Subject Subject Range Query Range Percent Splice Strand
CG16727-RA 121..1758 17..1654 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:57:45 Download gff for BS15148.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19613501..19613643 17..159 100 -> Plus
3R 19613854..19614296 160..602 100 -> Plus
3R 19614355..19614772 603..1020 100 -> Plus
3R 19614828..19615334 1021..1527 100 -> Plus
3R 19615402..19615528 1528..1654 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:58:53 Download gff for BS15148.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 15439223..15439365 17..159 100 -> Plus
arm_3R 15439576..15440018 160..602 100 -> Plus
arm_3R 15440077..15440494 603..1020 100 -> Plus
arm_3R 15440550..15441056 1021..1527 100 -> Plus
arm_3R 15441124..15441250 1528..1654 100   Plus

BS15148.3prime Sequence

771 bp (747 high quality bases) assembled on 2006-10-24

> BS15148.3prime
ATGGTCTAGAAAGCTTCTACGGTTCAGACTTTCGGTCCTCATGCTCGGTC
AGACTTTCGCGGCGTTTGTGTAAGCATGGGAAGTACAGGCAGCTCTCGTT
GATTGCAAAGCGCTCACCATCGGCCAGGGTTTCGGGTAGTTTTTTGTGAA
GCGTTTCGGGAAGGGTCAGGCAGAGTAGAGCACCTAGGAACATTAGAACG
CTGATGAAGATCGAGGGCAGGGGCTTGTAGTATTGTGCCAGGTAGATCAC
ATAGAAGGCCAGTGAGCTGGAGGCCAATCCAACCACATGGATGTTGGACA
CCGCCTGTCCGCGCACACTGGTCGGAATGATTTCCGCTGCGTACTGGATC
TCTGCATCGTAGGAAACCGTTGTGCCAAAGCGACCCAGACCCACCATTAG
GGCCAGCAGGACAGCATTCTCACTGGGATCCAGTACTGCGATCAGGAATC
CGGTGACAGCGGTTATAATAGCTCCCACCAGCAGTGCTCCACATGCCATG
CCCTTCCGCCCAATCTTGTTCTGCAGCAGTAAGATGGTGAAACCAGCTGG
TAGGTAAACACTGGAGGTTAGCGAAAAGAGCTTAAAGGGCGAAGAGCCCA
GCCCTTCCATGTTCCTGTTGATCACGTCGTAGGATAGCGTGATGATGACC
GATTTAACCAGCAATGTGGTGGTGAAGCGACGCAATCTGGGAGTCTTGAA
CATTCCTAGGAATGTATCCATTTGCTTGTTCAACTTGCTCTCCTCGTTCA
TTTTCTCGCGATAATGCTTTA

BS15148.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:15:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG16727-PA 1638 CG16727-RA 884..1634 771..21 3730 99.8 Minus
CG7333-PA 1647 CG7333-RA 1312..1475 367..204 495 92 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:17:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG16727-RA 2014 CG16727-RA 1004..1759 771..16 3750 99.7 Minus
CG7333-RB 1698 CG7333-RB 1012..1616 685..81 910 77.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:17:04
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19614828..19615334 650..144 2535 100 Minus
3R 32079331 3R 19601922..19602371 649..200 825 78.9 Minus
3R 32079331 3R 19614652..19614773 771..650 610 100 Minus
3R 32079331 3R 19615402..19615529 143..16 610 98.4 Minus
Blast to na_te.dros performed on 2015-02-10 22:17:08 has no hits.

BS15148.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:18:20 Download gff for BS15148.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16727-PA 885..1638 17..770 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:52:05 Download gff for BS15148.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16727-PA 885..1638 17..770 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 11:20:38 Download gff for BS15148.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16727-RA 1005..1759 16..770 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:05:27 Download gff for BS15148.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16727-RA 1005..1759 16..770 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:05:27 Download gff for BS15148.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 19614653..19614772 651..770 100 -> Minus
3R 19614828..19615334 144..650 100 -> Minus
3R 19615402..19615529 16..143 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 11:20:38 Download gff for BS15148.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 15440375..15440494 651..770 100 -> Minus
arm_3R 15440550..15441056 144..650 100 -> Minus
arm_3R 15441124..15441251 16..143 98   Minus

BS15148.5prime Sequence

732 bp (731 high quality bases) assembled on 2006-10-23

> BS15148.5prime
GAAGTTACCCTGTCGACATGGATTTCGACCGCGTGCTTGAGAAGTGCGGA
AACTTCGGAAGATTTCAGTTTGTCATTCTAATTCTCTACGGCTACACGAA
CATTCTTAGTTCGTTGCACTATTTCTCACAGACCCTTATTACTTTTACAC
CCGAGCATTGGTGTTCCCACGATGACCTAATGGGCTTGGGTGCCGCGGAG
CTGCGATCCATTTACTCCAACGTTTCGCACCCCTCCTGCACTCTTCTCTC
CGAGGTGATCAATGGAACTGGAGTGGCCTCCGAAGAGTCCTGTCAAGACT
GGATCTTCGAGCGGGAGAACGGCTACGAGAGTCTAACCACTGAACTGAAA
TGGGTCTGCGACAAATCCCATCAGCCGGCGGTGGGTCAATCCTTCTTCTT
CCTGGGCTCGGTGGTGGGCACCATTTCCTTTGGATTTCTTTCTGACCACA
TTGGAAGATTGCCGGCCATGCTGATGGCGGCTCTATCCGGTGCAACTGGT
GACTTTATTACCTCGTTTGTGCACACGCTACCCTGGTTCGCCTTCTCGAG
ATTTGTGTCAGGACTGTCCACGGATACCATGTACTACCTTATGTACATCT
TGGTCTTCGAGTACCTGAGTCCCAAGCGTCGTACCTTTGGTCTGAACATC
ATCCTGGCTGTATTCTACTGCTTTGGACTGATGACCTCGCCCTGGATCGC
CATGTGGATTGGCAACTGGCGTCGCTACCTCT

BS15148.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:15:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG16727-PA 1638 CG16727-RA 1..715 18..732 3575 100 Plus
CG7333-PA 1647 CG7333-RA 496..737 489..730 485 88 Plus
CG7333-PA 1647 CG7333-RA 355..431 348..424 135 87 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:23:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG16727-RA 2014 CG16727-RA 120..835 17..732 3580 100 Plus
CG7333-RB 1698 CG7333-RB 338..755 313..730 1010 82.8 Plus
CG17752-RA 1716 CG17752-RA 585..730 587..732 310 81.6 Plus
CG7333-RB 1698 CG7333-RB 109..206 87..183 210 81.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:23:32
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19613853..19614296 160..603 2220 100 Plus
3R 32079331 3R 19613500..19613645 17..162 730 100 Plus
3R 32079331 3R 19614354..19614483 603..732 650 100 Plus
3R 32079331 3R 19601130..19601385 348..603 560 81.2 Plus
3R 32079331 3R 19601445..19601572 603..730 400 87.5 Plus
3R 32079331 3R 19611206..19611332 606..732 260 80.3 Plus
3R 32079331 3R 19600743..19600819 87..163 190 83.1 Plus
Blast to na_te.dros performed on 2015-02-11 17:23:35 has no hits.

BS15148.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:18:21 Download gff for BS15148.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16727-PA 1..715 18..732 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:52:07 Download gff for BS15148.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16727-PA 1..715 18..732 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:54:02 Download gff for BS15148.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16727-RA 116..835 13..732 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:10:44 Download gff for BS15148.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16727-RA 116..835 13..732 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:10:44 Download gff for BS15148.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 19614355..19614483 604..732 100   Plus
3R 19613496..19613643 13..160 98 -> Plus
3R 19613854..19614296 161..603 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:54:02 Download gff for BS15148.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 15439218..15439365 13..160 98 -> Plus
arm_3R 15439576..15440018 161..603 100 -> Plus
arm_3R 15440077..15440205 604..732 100   Plus

BS15148.pep Sequence

Translation from 16 to 1653

> BS15148.pep
MDFDRVLEKCGNFGRFQFVILILYGYTNILSSLHYFSQTLITFTPEHWCS
HDDLMGLGAAELRSIYSNVSHPSCTLLSEVINGTGVASEESCQDWIFERE
NGYESLTTELKWVCDKSHQPAVGQSFFFLGSVVGTISFGFLSDHIGRLPA
MLMAALSGATGDFITSFVHTLPWFAFSRFVSGLSTDTMYYLMYILVFEYL
SPKRRTFGLNIILAVFYCFGLMTSPWIAMWIGNWRRYLWLASLPALGVLI
YPLLICESAQWLLTKKKYDEAVACLKKVAKFNGRQVEDSVFDEFVKHYRE
KMNEESKLNKQMDTFLGMFKTPRLRRFTTTLLVKSVIITLSYDVINRNME
GLGSSPFKLFSLTSSVYLPAGFTILLLQNKIGRKGMACGALLVGAIITAV
TGFLIAVLDPSENAVLLALMVGLGRFGTTVSYDAEIQYAAEIIPTSVRGQ
AVSNIHVVGLASSSLAFYVIYLAQYYKPLPSIFISVLMFLGALLCLTLPE
TLHKKLPETLADGERFAMNESCLYFPCLHKRRESLTEHEDRKSEP*

BS15148.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:14:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG16727-PA 545 CG16727-PA 1..545 1..545 2835 100 Plus
CG7333-PB 541 CG7333-PB 1..536 1..535 2286 80.8 Plus
CG17752-PA 538 CG17752-PA 1..523 1..534 1751 61.9 Plus
CG17751-PB 533 CG17751-PB 1..513 1..531 1736 60.8 Plus
CG6231-PF 585 CG6231-PF 1..538 1..544 1409 47.2 Plus