Clone Sequence Records
BS15148.complete Sequence
1670 bp assembled on 2009-12-07
GenBank Submission: KX800257
> BS15148.complete
GAAGTTATCAGTCGACATGGATTTCGACCGCGTGCTTGAGAAGTGCGGAA
ACTTCGGAAGATTTCAGTTTGTCATTCTAATTCTCTACGGCTACACGAAC
ATTCTTAGTTCGTTGCACTATTTCTCACAGACCCTTATTACTTTTACACC
CGAGCATTGGTGTTCCCACGATGACCTAATGGGCTTGGGTGCCGCGGAGC
TGCGATCCATTTACTCCAACGTTTCGCACCCCTCCTGCACTCTTCTCTCC
GAGGTGATCAATGGAACTGGAGTGGCCTCCGAAGAGTCCTGTCAAGACTG
GATCTTCGAGCGGGAGAACGGCTACGAGAGTCTAACCACTGAACTGAAAT
GGGTCTGCGACAAATCCCATCAGCCGGCGGTGGGTCAATCCTTCTTCTTC
CTGGGCTCGGTGGTGGGCACCATTTCCTTTGGATTTCTTTCTGACCACAT
TGGAAGATTGCCGGCCATGCTGATGGCGGCTCTATCCGGTGCAACTGGTG
ACTTTATTACCTCGTTTGTGCACACGCTACCCTGGTTCGCCTTCTCGAGA
TTTGTGTCAGGACTGTCCACGGATACCATGTACTACCTTATGTACATCTT
GGTCTTCGAGTACCTGAGTCCCAAGCGTCGTACCTTTGGTCTGAACATCA
TCCTGGCTGTATTCTACTGCTTTGGACTGATGACCTCGCCCTGGATCGCC
ATGTGGATTGGCAACTGGCGTCGCTACCTCTGGTTGGCATCTCTTCCAGC
CCTAGGAGTTCTAATTTACCCCCTCCTGATCTGCGAAAGTGCTCAGTGGC
TGCTGACCAAGAAGAAGTACGATGAGGCGGTGGCATGTCTGAAGAAAGTG
GCCAAGTTTAATGGCCGCCAAGTTGAGGATTCTGTGTTTGATGAGTTCGT
AAAGCATTATCGCGAGAAAATGAACGAGGAGAGCAAGTTGAACAAGCAAA
TGGATACATTCCTAGGAATGTTCAAGACTCCCAGATTGCGTCGCTTCACC
ACCACATTGCTGGTTAAATCGGTCATCATCACGCTATCCTACGACGTGAT
CAACAGGAACATGGAAGGGCTGGGCTCTTCGCCCTTTAAGCTCTTTTCGC
TAACCTCCAGTGTTTACCTACCAGCTGGTTTCACCATCTTACTGCTGCAG
AACAAGATTGGGCGGAAGGGCATGGCATGTGGAGCACTGCTGGTGGGAGC
TATTATAACCGCTGTCACCGGATTCCTGATCGCAGTACTGGATCCCAGTG
AGAATGCTGTCCTGCTGGCCCTAATGGTGGGTCTGGGTCGCTTTGGCACA
ACGGTTTCCTACGATGCAGAGATCCAGTACGCAGCGGAAATCATTCCGAC
CAGTGTGCGCGGACAGGCGGTGTCCAACATCCATGTGGTTGGATTGGCCT
CCAGCTCACTGGCCTTCTATGTGATCTACCTGGCACAATACTACAAGCCC
CTGCCCTCGATCTTCATCAGCGTTCTAATGTTCCTAGGTGCTCTACTCTG
CCTGACCCTTCCCGAAACGCTTCACAAAAAACTACCCGAAACCCTGGCCG
ATGGTGAGCGCTTTGCAATGAACGAGAGCTGCCTGTACTTCCCATGCTTA
CACAAACGCCGCGAAAGTCTGACCGAGCATGAGGACCGAAAGTCTGAACC
CTAGAAGCTTTCTAGACCAT
BS15148.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:49:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16727-RA | 1638 | CG16727-PA | 1..1638 | 17..1654 | 8190 | 100 | Plus |
CG7333-RB | 1626 | CG7333-PB | 299..1577 | 312..1590 | 2165 | 78 | Plus |
CG17752-RA | 1617 | CG17752-PA | 543..882 | 586..925 | 395 | 74.4 | Plus |
CG7333-RB | 1626 | CG7333-PB | 70..161 | 86..177 | 205 | 81.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:49:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16727-RA | 2014 | CG16727-RA | 120..1759 | 16..1655 | 8200 | 100 | Plus |
CG7333-RB | 1698 | CG7333-RB | 338..1616 | 312..1590 | 2165 | 78 | Plus |
CG17752-RA | 1716 | CG17752-RA | 585..924 | 586..925 | 395 | 74.4 | Plus |
CG7333-RB | 1698 | CG7333-RB | 109..200 | 86..177 | 205 | 81.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:49:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 19614828..19615334 | 1021..1527 | 2535 | 100 | Plus |
3R | 32079331 | 3R | 19613853..19614296 | 159..602 | 2220 | 100 | Plus |
3R | 32079331 | 3R | 19614354..19614773 | 602..1021 | 2100 | 100 | Plus |
3R | 32079331 | 3R | 19601922..19602371 | 1022..1471 | 825 | 78.9 | Plus |
3R | 32079331 | 3R | 19601445..19601740 | 602..897 | 775 | 84.1 | Plus |
3R | 32079331 | 3R | 19613500..19613645 | 16..161 | 730 | 100 | Plus |
3R | 32079331 | 3R | 19615402..19615529 | 1528..1655 | 640 | 100 | Plus |
3R | 32079331 | 3R | 19601130..19601385 | 347..602 | 560 | 81.2 | Plus |
3R | 32079331 | 3R | 19611206..19611526 | 605..925 | 345 | 73.8 | Plus |
3R | 32079331 | 3R | 19600743..19600819 | 86..162 | 190 | 83.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:49:32 has no hits.
BS15148.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:41:50 Download gff for
BS15148.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16727-RA | 121..1758 | 17..1654 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:58:53 Download gff for
BS15148.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16727-RA | 121..1758 | 17..1654 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:26:36 Download gff for
BS15148.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16727-RA | 121..1758 | 17..1654 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:57:45 Download gff for
BS15148.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16727-RA | 121..1758 | 17..1654 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:57:45 Download gff for
BS15148.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 19613501..19613643 | 17..159 | 100 | -> | Plus |
3R | 19613854..19614296 | 160..602 | 100 | -> | Plus |
3R | 19614355..19614772 | 603..1020 | 100 | -> | Plus |
3R | 19614828..19615334 | 1021..1527 | 100 | -> | Plus |
3R | 19615402..19615528 | 1528..1654 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:58:53 Download gff for
BS15148.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 15439223..15439365 | 17..159 | 100 | -> | Plus |
arm_3R | 15439576..15440018 | 160..602 | 100 | -> | Plus |
arm_3R | 15440077..15440494 | 603..1020 | 100 | -> | Plus |
arm_3R | 15440550..15441056 | 1021..1527 | 100 | -> | Plus |
arm_3R | 15441124..15441250 | 1528..1654 | 100 | | Plus |
BS15148.3prime Sequence
771 bp (747 high quality bases) assembled on 2006-10-24
> BS15148.3prime
ATGGTCTAGAAAGCTTCTACGGTTCAGACTTTCGGTCCTCATGCTCGGTC
AGACTTTCGCGGCGTTTGTGTAAGCATGGGAAGTACAGGCAGCTCTCGTT
GATTGCAAAGCGCTCACCATCGGCCAGGGTTTCGGGTAGTTTTTTGTGAA
GCGTTTCGGGAAGGGTCAGGCAGAGTAGAGCACCTAGGAACATTAGAACG
CTGATGAAGATCGAGGGCAGGGGCTTGTAGTATTGTGCCAGGTAGATCAC
ATAGAAGGCCAGTGAGCTGGAGGCCAATCCAACCACATGGATGTTGGACA
CCGCCTGTCCGCGCACACTGGTCGGAATGATTTCCGCTGCGTACTGGATC
TCTGCATCGTAGGAAACCGTTGTGCCAAAGCGACCCAGACCCACCATTAG
GGCCAGCAGGACAGCATTCTCACTGGGATCCAGTACTGCGATCAGGAATC
CGGTGACAGCGGTTATAATAGCTCCCACCAGCAGTGCTCCACATGCCATG
CCCTTCCGCCCAATCTTGTTCTGCAGCAGTAAGATGGTGAAACCAGCTGG
TAGGTAAACACTGGAGGTTAGCGAAAAGAGCTTAAAGGGCGAAGAGCCCA
GCCCTTCCATGTTCCTGTTGATCACGTCGTAGGATAGCGTGATGATGACC
GATTTAACCAGCAATGTGGTGGTGAAGCGACGCAATCTGGGAGTCTTGAA
CATTCCTAGGAATGTATCCATTTGCTTGTTCAACTTGCTCTCCTCGTTCA
TTTTCTCGCGATAATGCTTTA
BS15148.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:15:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16727-PA | 1638 | CG16727-RA | 884..1634 | 771..21 | 3730 | 99.8 | Minus |
CG7333-PA | 1647 | CG7333-RA | 1312..1475 | 367..204 | 495 | 92 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:17:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16727-RA | 2014 | CG16727-RA | 1004..1759 | 771..16 | 3750 | 99.7 | Minus |
CG7333-RB | 1698 | CG7333-RB | 1012..1616 | 685..81 | 910 | 77.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:17:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 19614828..19615334 | 650..144 | 2535 | 100 | Minus |
3R | 32079331 | 3R | 19601922..19602371 | 649..200 | 825 | 78.9 | Minus |
3R | 32079331 | 3R | 19614652..19614773 | 771..650 | 610 | 100 | Minus |
3R | 32079331 | 3R | 19615402..19615529 | 143..16 | 610 | 98.4 | Minus |
Blast to na_te.dros performed on 2015-02-10 22:17:08 has no hits.
BS15148.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:18:20 Download gff for
BS15148.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16727-PA | 885..1638 | 17..770 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:52:05 Download gff for
BS15148.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16727-PA | 885..1638 | 17..770 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 11:20:38 Download gff for
BS15148.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16727-RA | 1005..1759 | 16..770 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:05:27 Download gff for
BS15148.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16727-RA | 1005..1759 | 16..770 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:05:27 Download gff for
BS15148.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 19614653..19614772 | 651..770 | 100 | -> | Minus |
3R | 19614828..19615334 | 144..650 | 100 | -> | Minus |
3R | 19615402..19615529 | 16..143 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 11:20:38 Download gff for
BS15148.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 15440375..15440494 | 651..770 | 100 | -> | Minus |
arm_3R | 15440550..15441056 | 144..650 | 100 | -> | Minus |
arm_3R | 15441124..15441251 | 16..143 | 98 | | Minus |
BS15148.5prime Sequence
732 bp (731 high quality bases) assembled on 2006-10-23
> BS15148.5prime
GAAGTTACCCTGTCGACATGGATTTCGACCGCGTGCTTGAGAAGTGCGGA
AACTTCGGAAGATTTCAGTTTGTCATTCTAATTCTCTACGGCTACACGAA
CATTCTTAGTTCGTTGCACTATTTCTCACAGACCCTTATTACTTTTACAC
CCGAGCATTGGTGTTCCCACGATGACCTAATGGGCTTGGGTGCCGCGGAG
CTGCGATCCATTTACTCCAACGTTTCGCACCCCTCCTGCACTCTTCTCTC
CGAGGTGATCAATGGAACTGGAGTGGCCTCCGAAGAGTCCTGTCAAGACT
GGATCTTCGAGCGGGAGAACGGCTACGAGAGTCTAACCACTGAACTGAAA
TGGGTCTGCGACAAATCCCATCAGCCGGCGGTGGGTCAATCCTTCTTCTT
CCTGGGCTCGGTGGTGGGCACCATTTCCTTTGGATTTCTTTCTGACCACA
TTGGAAGATTGCCGGCCATGCTGATGGCGGCTCTATCCGGTGCAACTGGT
GACTTTATTACCTCGTTTGTGCACACGCTACCCTGGTTCGCCTTCTCGAG
ATTTGTGTCAGGACTGTCCACGGATACCATGTACTACCTTATGTACATCT
TGGTCTTCGAGTACCTGAGTCCCAAGCGTCGTACCTTTGGTCTGAACATC
ATCCTGGCTGTATTCTACTGCTTTGGACTGATGACCTCGCCCTGGATCGC
CATGTGGATTGGCAACTGGCGTCGCTACCTCT
BS15148.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:15:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16727-PA | 1638 | CG16727-RA | 1..715 | 18..732 | 3575 | 100 | Plus |
CG7333-PA | 1647 | CG7333-RA | 496..737 | 489..730 | 485 | 88 | Plus |
CG7333-PA | 1647 | CG7333-RA | 355..431 | 348..424 | 135 | 87 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:23:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16727-RA | 2014 | CG16727-RA | 120..835 | 17..732 | 3580 | 100 | Plus |
CG7333-RB | 1698 | CG7333-RB | 338..755 | 313..730 | 1010 | 82.8 | Plus |
CG17752-RA | 1716 | CG17752-RA | 585..730 | 587..732 | 310 | 81.6 | Plus |
CG7333-RB | 1698 | CG7333-RB | 109..206 | 87..183 | 210 | 81.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:23:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 19613853..19614296 | 160..603 | 2220 | 100 | Plus |
3R | 32079331 | 3R | 19613500..19613645 | 17..162 | 730 | 100 | Plus |
3R | 32079331 | 3R | 19614354..19614483 | 603..732 | 650 | 100 | Plus |
3R | 32079331 | 3R | 19601130..19601385 | 348..603 | 560 | 81.2 | Plus |
3R | 32079331 | 3R | 19601445..19601572 | 603..730 | 400 | 87.5 | Plus |
3R | 32079331 | 3R | 19611206..19611332 | 606..732 | 260 | 80.3 | Plus |
3R | 32079331 | 3R | 19600743..19600819 | 87..163 | 190 | 83.1 | Plus |
Blast to na_te.dros performed on 2015-02-11 17:23:35 has no hits.
BS15148.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:18:21 Download gff for
BS15148.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16727-PA | 1..715 | 18..732 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:52:07 Download gff for
BS15148.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16727-PA | 1..715 | 18..732 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:54:02 Download gff for
BS15148.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16727-RA | 116..835 | 13..732 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:10:44 Download gff for
BS15148.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16727-RA | 116..835 | 13..732 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:10:44 Download gff for
BS15148.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 19614355..19614483 | 604..732 | 100 | | Plus |
3R | 19613496..19613643 | 13..160 | 98 | -> | Plus |
3R | 19613854..19614296 | 161..603 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:54:02 Download gff for
BS15148.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 15439218..15439365 | 13..160 | 98 | -> | Plus |
arm_3R | 15439576..15440018 | 161..603 | 100 | -> | Plus |
arm_3R | 15440077..15440205 | 604..732 | 100 | | Plus |
BS15148.pep Sequence
Translation from 16 to 1653
> BS15148.pep
MDFDRVLEKCGNFGRFQFVILILYGYTNILSSLHYFSQTLITFTPEHWCS
HDDLMGLGAAELRSIYSNVSHPSCTLLSEVINGTGVASEESCQDWIFERE
NGYESLTTELKWVCDKSHQPAVGQSFFFLGSVVGTISFGFLSDHIGRLPA
MLMAALSGATGDFITSFVHTLPWFAFSRFVSGLSTDTMYYLMYILVFEYL
SPKRRTFGLNIILAVFYCFGLMTSPWIAMWIGNWRRYLWLASLPALGVLI
YPLLICESAQWLLTKKKYDEAVACLKKVAKFNGRQVEDSVFDEFVKHYRE
KMNEESKLNKQMDTFLGMFKTPRLRRFTTTLLVKSVIITLSYDVINRNME
GLGSSPFKLFSLTSSVYLPAGFTILLLQNKIGRKGMACGALLVGAIITAV
TGFLIAVLDPSENAVLLALMVGLGRFGTTVSYDAEIQYAAEIIPTSVRGQ
AVSNIHVVGLASSSLAFYVIYLAQYYKPLPSIFISVLMFLGALLCLTLPE
TLHKKLPETLADGERFAMNESCLYFPCLHKRRESLTEHEDRKSEP*
BS15148.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:14:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16727-PA | 545 | CG16727-PA | 1..545 | 1..545 | 2835 | 100 | Plus |
CG7333-PB | 541 | CG7333-PB | 1..536 | 1..535 | 2286 | 80.8 | Plus |
CG17752-PA | 538 | CG17752-PA | 1..523 | 1..534 | 1751 | 61.9 | Plus |
CG17751-PB | 533 | CG17751-PB | 1..513 | 1..531 | 1736 | 60.8 | Plus |
CG6231-PF | 585 | CG6231-PF | 1..538 | 1..544 | 1409 | 47.2 | Plus |