Clone BS15177 Report

Search the DGRC for BS15177

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:151
Well:77
Vector:pDNR-Dual
Associated Gene/TranscriptCG2070-RA
Protein status:BS15177.pep: full length peptide match
Sequenced Size:1010

Clone Sequence Records

BS15177.complete Sequence

1010 bp assembled on 2010-02-09

GenBank Submission: KX802629

> BS15177.complete
GAAGTTATCAGTCGACATGAGTGCACCCACGGATTACCTGTTCTGCCCGC
TGGCATATGGGTCAGCTCTTTCGGCCATCGGAATCTATCTGCTCCGACAA
TATATGCAGGGAGGTCAGTTCACCACGAAAACGAATGAGACCGGCAGAGT
GGCGATTGTGACCGGCTGCAACCAGGGGATTGGCAAGGAGACCGTTCTGG
AGCTGGCCCGCAGGGGAGCTACCGTGTACATGGCTTGTCGGGACATGAAG
AAGTGCGAGAATGCCCGTCGGGAGATCATCAAAGCGACCAACAACCAGAA
CATCTTCGCACGCCAATTGGACCTGTGCTCCATGAAGTCCATTAGGAACT
TCGCTGCTGGCTTTAAGCGGGAGCAAAACAAGCTTCACATTCTTATCAAC
AACGCCGGCATTATGGACTGCCCCAAAATGCTGACGGAGGACGGATTTGA
AATGCAAATCGGAGTGAATCACATGGGCCACTTCCTCCTCACACTTCTGC
TTCTCGATGTCCTGAAGAGTTCCGCGCCCAGTCGCGTTGTGGTCCTGTCC
AGCATTGCTCACCGCTTCGGAAGGATTAAGCGTGACGACCTGAACAGCGA
AAAGTCCTATGACAGAAAGATGGCCTACTGTCAGAGCAAATTGGCCAACG
TCCTCTTCACCAGGGAGTTGGCGAAACGCCTGAGCGGAACAGGGGTCACG
GTAAATGCCCTACATCCCGGAGTAGTAAACACGGAACTGTTCCGCAATAC
ACCCTTTTTGGGTTCGTGGTTTGGAAAATTGCTCATAGCCCCTATTATAT
GGATATTCATAAAGACGGCTAGGAATGGCGCACAGACGACCCTGTACGCT
GCCCTGGATCCCAGTTTGGAAAAAGTATCTGGAAGATACTTCAGCGATTG
CAAGCAGAAGCACGTGGGCTCGGCCGCCCAGTATGACGATGATGCCCAAT
TCCTATGGGCGGAAAGTGAAAAGTGGACGGGAATTAATATATGAAAGCTT
TCTAGACCAT

BS15177.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:04:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG2070-RB 978 CG2070-PB 1..978 17..994 4890 100 Plus
CG2070-RA 978 CG2070-PA 1..978 17..994 4890 100 Plus
CG2065-RB 903 CG2065-PB 1..637 104..740 620 73.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:04:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG2070-RB 1381 CG2070-RB 183..1160 17..994 4890 100 Plus
CG2070-RA 1105 CG2070-RA 56..1033 17..994 4890 100 Plus
CG2065-RB 1233 CG2065-RB 181..822 99..740 630 73.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:04:46
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7662498..7662915 360..777 2090 100 Plus
2R 25286936 2R 7662165..7662429 96..360 1325 100 Plus
2R 25286936 2R 7662971..7663187 778..994 1085 100 Plus
2R 25286936 2R 7662037..7662116 17..96 400 100 Plus
2R 25286936 2R 7664035..7664296 99..360 350 75.6 Plus
2R 25286936 2R 7664643..7664797 586..740 235 76.8 Plus
Blast to na_te.dros performed on 2014-11-27 13:04:48 has no hits.

BS15177.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:10:57 Download gff for BS15177.complete
Subject Subject Range Query Range Percent Splice Strand
CG2070-RA 26..1002 17..993 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:26:39 Download gff for BS15177.complete
Subject Subject Range Query Range Percent Splice Strand
CG2070-RA 56..1032 17..993 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:57:08 Download gff for BS15177.complete
Subject Subject Range Query Range Percent Splice Strand
CG2070-RA 26..1002 17..993 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:10:31 Download gff for BS15177.complete
Subject Subject Range Query Range Percent Splice Strand
CG2070-RA 56..1032 17..993 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:10:31 Download gff for BS15177.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7662037..7662116 17..96 100 -> Plus
2R 7662166..7662429 97..360 100 -> Plus
2R 7662499..7662915 361..777 100 -> Plus
2R 7662971..7663186 778..993 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:26:39 Download gff for BS15177.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3549542..3549621 17..96 100 -> Plus
arm_2R 3549671..3549934 97..360 100 -> Plus
arm_2R 3550004..3550420 361..777 100 -> Plus
arm_2R 3550476..3550691 778..993 100   Plus

BS15177.3prime Sequence

809 bp (793 high quality bases) assembled on 2006-10-24

> BS15177.3prime
ATGGTCTAGAAAGCTTTCACATATTAATTCCCGTCCACTTTTCACTTTCC
GCCCATAGGAATTGGGCATCATCGTCATACTGGGCGGCCGAGCCCACGTG
CTTCTGCTTGCAATCGCTGAAGTATCTTCCAGATACTTTTTCCAAACTGG
GATCCAGGGCAGCGTACAGGGTCGTCTGTGCGCCATTCCTAGCCGTCTTT
ATGAATATCCATATAATAGGGGCTATGAGCAATTTTCCAAACCACGAACC
CAAAAAGGGTGTATTGCGGAACAGTTCCGTGTTTACTACTCCGGGATGTA
GGGCATTTACCGTGACCCCTGTTCCGCTCAGGCGTTTCGCCAACTCCCTG
GTGAAGAGGACGTTGGCCAATTTGCTCTGACAGTAGGCCATCTTTCTGTC
ATAGGACTTTTCGCTGTTCAGGTCGTCACGCTTAATCCTTCCGAAGCGGT
GAGCAATGCTGGACAGGACCACAACGCGACTGGGCGCGGAACTCTTCAGG
ACATCGAGAAGCAGAAGTGTGAGGAGGAAGTGGCCCATGTGATTCACTCC
GATTTGCATTTCAAATCCGTCCTCCGTCAGCATTTTGGGGCAGTCCATAA
TGCCGGCGTTGTTGATAAGAATGTGAAGCTTGTTTTGCTCCCGCTTAAAG
CCAGCAGCGAAGTTCCTAATGGACTTCATGGAGCACAGGTCCAATTGGCG
TGCGAAGATGTTCTGGTTGTTGGTCGCTTTGATGATCTCCCGACGGGCAT
TCTCGCACTTCTTCATGTCCCGACAAGCCATGTACACGGTAGCTCCCCTG
CGGGCCAGC

BS15177.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:15:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG2070-PA 978 CG2070-RA 186..974 809..21 3945 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:39:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG2070-RB 1381 CG2070-RB 368..1160 809..17 3950 99.9 Minus
CG2070-RA 1105 CG2070-RA 241..1033 809..17 3950 99.9 Minus
CG2065-RB 1233 CG2065-RB 306..822 787..271 470 73.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:39:05
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7662498..7662915 651..234 2090 100 Minus
2R 25286936 2R 7662971..7663187 233..17 1070 99.5 Minus
2R 25286936 2R 7662271..7662429 809..651 795 100 Minus
2R 25286936 2R 7664643..7664797 425..271 235 76.8 Minus
2R 25286936 2R 7664160..7664296 787..651 190 75.9 Minus
Blast to na_te.dros performed on 2015-02-11 04:39:08 has no hits.

BS15177.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:19:08 Download gff for BS15177.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2070-PA 186..978 17..809 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:53:10 Download gff for BS15177.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2070-PA 186..978 17..809 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:38:17 Download gff for BS15177.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2070-RA 241..1041 10..809 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:09:35 Download gff for BS15177.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2070-RA 241..1041 10..809 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:09:35 Download gff for BS15177.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 7662271..7662429 651..809 100 -> Minus
2R 7662499..7662915 234..650 100 -> Minus
2R 7662971..7663195 10..233 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:38:17 Download gff for BS15177.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3549776..3549934 651..809 100 -> Minus
arm_2R 3550004..3550420 234..650 100 -> Minus
arm_2R 3550476..3550700 10..233 98   Minus

BS15177.5prime Sequence

864 bp (771 high quality bases) assembled on 2006-10-23

> BS15177.5prime
GAAGTTATCAGTCGACATGAGTGCACCCACGGATTACCTGTTCTGCCCGC
TGGCATATGGGTCAGCTCTTTCGGCCATCGGAATCTATCTGCTCCGACAA
TATATGCAGGGAGGTCAGTTCACCACGAAAACGAATGAGACCGGCAGAGT
GGCGATTGTGACCGGCTGCAACCAGGGGATTGGCAAGGAGACCGTTCTGG
AGCTGGCCCGCAGGGGAGCTACCGTGTACATGGCTTGTCGGGACATGAAG
AAGTGCGAGAATGCCCGTCGGGAGATCATCAAAGCGACCAACAACCAGAA
CATCTTCGCACGCCAATTGGACCTGTGCTCCATGAAGTCCATTAGGAACT
TCGCTGCTGGCTTTAAGCGGGAGCAAAACAAGCTTCACATTCTTATCAAC
AACGCCGGCATTATGGACTGCCCCAAAATGCTGACGGAGGACGGATTTGA
AATGCAAATCGGAGTGAATCACATGGGCCACTTCCTCCTCACACTTCTGC
TTCTCGATGTCCTGAAGAGTTCCGCGCCCAGTCGCGTTGTGGTCCTGTCC
AGCATTGCTCACCGCTTCGGAAGGATTAAGCGTGACGACCTGAACAGCGA
AAAGTCCTATGACAGAAAGATGGCCTACTGTCAGAGCAAATTGGCCAACG
TCCTCTTCACCAGGGAGTTGGCGAAACGCCTGAGCGGAACAGGGGTCACG
GTAAATGCCCTACATCCCGGAGTAGTAAACACGGAACTGTTCCGCAATAC
ACCCTTTTTGGGTTCGTGGTTTGGAAAATGCTCATAGCCCCTATTATATG
GATATTCATAAAGACGGCTAGGAATGGCGCACAGACGACCCTGTACGCTG
CCCTGGATCCCAGT

BS15177.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:15:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG2070-PA 978 CG2070-RA 1..763 17..779 3815 100 Plus
CG2070-PA 978 CG2070-RA 764..849 779..864 430 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:16:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG2070-RB 1381 CG2070-RB 183..1031 17..864 4220 99.9 Plus
CG2070-RA 1105 CG2070-RA 56..904 17..864 4220 99.9 Plus
CG2065-RB 1233 CG2065-RB 181..822 99..740 630 74 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:16:07
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7662498..7662915 360..777 2090 100 Plus
2R 25286936 2R 7662165..7662429 96..360 1325 100 Plus
2R 25286936 2R 7662973..7663058 779..864 430 100 Plus
2R 25286936 2R 7662037..7662116 17..96 400 100 Plus
2R 25286936 2R 7664035..7664296 99..360 350 75.6 Plus
2R 25286936 2R 7664643..7664797 586..740 235 76.8 Plus
Blast to na_te.dros performed on 2015-02-10 22:16:12 has no hits.

BS15177.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:19:09 Download gff for BS15177.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2070-PA 1..849 17..864 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:53:12 Download gff for BS15177.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2070-PA 1..849 17..864 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 11:20:30 Download gff for BS15177.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2070-RA 56..904 17..864 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:05:18 Download gff for BS15177.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2070-RA 56..904 17..864 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:05:18 Download gff for BS15177.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 7662166..7662429 97..360 100 -> Plus
2R 7662037..7662116 17..96 100 -> Plus
2R 7662499..7662915 361..777 100 -> Plus
2R 7662971..7663058 778..864 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 11:20:30 Download gff for BS15177.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3549542..3549621 17..96 100 -> Plus
arm_2R 3549671..3549934 97..360 100 -> Plus
arm_2R 3550004..3550420 361..777 100 -> Plus
arm_2R 3550476..3550563 778..864 98   Plus

BS15177.pep Sequence

Translation from 16 to 993

> BS15177.pep
MSAPTDYLFCPLAYGSALSAIGIYLLRQYMQGGQFTTKTNETGRVAIVTG
CNQGIGKETVLELARRGATVYMACRDMKKCENARREIIKATNNQNIFARQ
LDLCSMKSIRNFAAGFKREQNKLHILINNAGIMDCPKMLTEDGFEMQIGV
NHMGHFLLTLLLLDVLKSSAPSRVVVLSSIAHRFGRIKRDDLNSEKSYDR
KMAYCQSKLANVLFTRELAKRLSGTGVTVNALHPGVVNTELFRNTPFLGS
WFGKLLIAPIIWIFIKTARNGAQTTLYAALDPSLEKVSGRYFSDCKQKHV
GSAAQYDDDAQFLWAESEKWTGINI*

BS15177.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:10:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG2070-PB 325 CG2070-PB 1..325 1..325 1686 100 Plus
CG2070-PA 325 CG2070-PA 1..325 1..325 1686 100 Plus
CG2064-PA 330 CG2064-PA 6..324 6..324 1106 66.5 Plus
CG2065-PB 300 CG2065-PB 1..295 30..324 1105 71.2 Plus
CG2065-PA 300 CG2065-PA 1..295 30..324 1105 71.2 Plus