Clone BS15191 Report

Search the DGRC for BS15191

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:151
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptTsp66A-RA
Protein status:BS15191.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15191.3prime Sequence

342 bp (342 high quality bases) assembled on 2006-10-23

> BS15191.3prime
ATGGTCTAGAAAGCTTTTCACAGGATAATAAGGAATACCTCAATGCATAT
GACTGAATTACGAAGGAGATCACATGGATGATGGGCGACGCGGGCTTTAT
GGAGCGCGTGGAGCAGCCTGATCGGTACAGGTCCTCATCCCTTTCACTGC
CATTCTTGTAACAGGATTTTGGGATATTCAGATCGCCCAACTTGTAGTCG
TCAGGTCCCAAAACTCCGCAGCACTGGCAGCGACTTTCGTAGAATTCCAA
ACTCTTGCGATTCATCCATATTCGAAGTACATCTCCAACAATTTGGTACT
GTTGTGCAAACAGTATAGTCAGCATCATGTCGACTGATAACT

BS15191.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:15:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG16991-PA 312 Tsp66A-RA 1..309 328..20 1545 100 Minus
CG16991-PB 648 Tsp66A-RB 256..532 328..52 1385 100 Minus
CG16991-PB 648 Tsp66A-RB 540..574 54..20 175 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:19:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG42661-RB 2597 CG42661-RB 1659..1977 328..20 1435 96.9 Minus
CG42661-RA 2531 CG42661-RA 1593..1911 328..20 1435 96.9 Minus
CG42660-RB 2597 CG42660-RB 1659..1977 328..20 1435 96.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 21:19:23
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7467920..7468096 229..53 885 100 Minus
3L 28110227 3L 7467760..7467858 328..230 495 100 Minus
Blast to na_te.dros performed 2015-02-04 21:19:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\ninja 6644 Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). 4216..4286 93..163 103 60.6 Plus

BS15191.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:19:29 Download gff for BS15191.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16991-PA 1..312 17..328 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:53:38 Download gff for BS15191.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16991-PA 1..312 17..328 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:42:00 Download gff for BS15191.3prime
Subject Subject Range Query Range Percent Splice Strand
Tsp66A-RA 220..536 13..328 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-05 00:45:38 Download gff for BS15191.3prime
Subject Subject Range Query Range Percent Splice Strand
CG42660-RB 1659..1985 13..328 96   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-05 00:45:38 Download gff for BS15191.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 7467760..7467858 230..328 100 -> Minus
3L 7467920..7468096 53..229 100 -> Minus
3L 7468156..7468186 22..52 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:42:00 Download gff for BS15191.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7460860..7460958 230..328 100 -> Minus
arm_3L 7461020..7461196 53..229 100 -> Minus
arm_3L 7461256..7461286 22..52 100 -> Minus

BS15191.5prime Sequence

342 bp (342 high quality bases) assembled on 2006-10-23

> BS15191.5prime
GAAGTTATCAGTCGACATGATGCTGACTATACTGTTTGCACAACAGTACC
AAATTGTTGGAGATGTACTTCGAATATGGATGAATCGCAAGAGTTTGGAA
TTCTACGAAAGTCGCTGCCAGTGCTGCGGAGTTTTGGGACCTGACGACTA
CAAGTTGGGCGATCTGAATATCCCAAAATCCTGTTACAAGAATGGCAGTG
AAAGGGATGAGGACCTGTACCGATCAGGCTGCTCCACGCGCTCCATAAAG
CCCGCGTCGCCCATCATCCATGTGATCTCCTTCGTAATTCAGTCATATGC
ATTGAGGTATTCCTTATTATCCTGTTAAAAGCTTTCTAGACC

BS15191.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:15:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG16991-PA 312 Tsp66A-RA 1..312 17..328 1560 100 Plus
CG16991-PB 648 Tsp66A-RB 256..532 17..293 1385 100 Plus
CG16991-PB 648 Tsp66A-RB 540..577 291..328 190 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:23:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG42661-RB 2597 CG42661-RB 1659..1980 17..328 1450 96.9 Plus
CG42661-RA 2531 CG42661-RA 1593..1914 17..328 1450 96.9 Plus
CG42660-RB 2597 CG42660-RB 1659..1980 17..328 1450 96.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:23:01
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7467920..7468096 116..292 885 100 Plus
3L 28110227 3L 7467760..7467858 17..115 495 100 Plus
3L 28110227 3L 7468154..7468191 291..328 190 100 Plus
Blast to na_te.dros performed 2015-02-12 10:23:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\ninja 6644 Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). 4216..4286 252..182 103 60.6 Minus

BS15191.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:19:31 Download gff for BS15191.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16991-PA 1..312 17..328 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:53:40 Download gff for BS15191.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16991-PA 1..312 17..328 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:56:41 Download gff for BS15191.5prime
Subject Subject Range Query Range Percent Splice Strand
Tsp66A-RA 220..536 17..332 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:57:29 Download gff for BS15191.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42660-RB 1659..1985 17..332 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:57:29 Download gff for BS15191.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 7468156..7468196 293..332 95   Plus
3L 7467760..7467858 17..115 100 -> Plus
3L 7467920..7468096 116..292 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:56:41 Download gff for BS15191.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7460860..7460958 17..115 100 -> Plus
arm_3L 7461020..7461196 116..292 100 -> Plus
arm_3L 7461256..7461296 293..332 95   Plus

BS15191.complete Sequence

344 bp assembled on 2006-11-01

GenBank Submission: FJ637886

> BS15191.complete
GAAGTTATCAGTCGACATGATGCTGACTATACTGTTTGCACAACAGTACC
AAATTGTTGGAGATGTACTTCGAATATGGATGAATCGCAAGAGTTTGGAA
TTCTACGAAAGTCGCTGCCAGTGCTGCGGAGTTTTGGGACCTGACGACTA
CAAGTTGGGCGATCTGAATATCCCAAAATCCTGTTACAAGAATGGCAGTG
AAAGGGATGAGGACCTGTACCGATCAGGCTGCTCCACGCGCTCCATAAAG
CCCGCGTCGCCCATCATCCATGTGATCTCCTTCGTAATTCAGTCATATGC
ATTGAGGTATTCCTTATTATCCTGTTAAAAGCTTTCTAGACCAT

BS15191.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:58:01
Subject Length Description Subject Range Query Range Score Percent Strand
Tsp66A-RC 711 CG16991-PC 319..640 17..328 1425 96.9 Plus
Tsp66A-RD 711 CG16991-PD 319..640 17..328 1425 96.9 Plus
Tsp66A-RE 717 CG16991-PE 325..646 17..328 1425 96.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:58:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG42661-RB 2597 CG42661-RB 1659..1980 17..328 1425 96.9 Plus
CG42661-RA 2531 CG42661-RA 1593..1914 17..328 1425 96.9 Plus
CG42660-RB 2597 CG42660-RB 1659..1980 17..328 1425 96.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:57:59
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7467920..7468096 116..292 885 100 Plus
3L 28110227 3L 7467760..7467858 17..115 495 100 Plus
3L 28110227 3L 7468154..7468191 291..328 190 100 Plus
Blast to na_te.dros performed 2014-11-26 16:58:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\ninja 6644 Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). 4216..4286 252..182 103 60.6 Minus

BS15191.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:44:24 Download gff for BS15191.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp66A-RA 1..312 17..328 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:11:15 Download gff for BS15191.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp66A-RA 220..536 17..332 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:14:17 Download gff for BS15191.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp66A-RA 220..529 17..326 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:44:24 Download gff for BS15191.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp66A-RA 220..536 17..332 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:31:47 Download gff for BS15191.complete
Subject Subject Range Query Range Percent Splice Strand
CG42660-RB 1659..1978 17..326 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:31:47 Download gff for BS15191.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7467760..7467858 17..115 100 -> Plus
3L 7467920..7468096 116..292 100 -> Plus
3L 7468156..7468189 293..326 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:14:17 Download gff for BS15191.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7460860..7460958 17..115 100 -> Plus
arm_3L 7461020..7461196 116..292 100 -> Plus
arm_3L 7461256..7461289 293..326 100   Plus

BS15191.pep Sequence

Translation from 16 to 327

> BS15191.pep
MMLTILFAQQYQIVGDVLRIWMNRKSLEFYESRCQCCGVLGPDDYKLGDL
NIPKSCYKNGSERDEDLYRSGCSTRSIKPASPIIHVISFVIQSYALRYSL
LSC*

BS15191.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:39:05
Subject Length Description Subject Range Query Range Score Percent Strand
Tsp66A-PC 236 CG16991-PC 107..204 1..103 493 92.2 Plus
Tsp66A-PD 236 CG16991-PD 107..204 1..103 493 92.2 Plus
Tsp66A-PE 238 CG16991-PE 109..206 1..103 493 92.2 Plus
Tsp66A-PF 234 CG16991-PF 107..202 1..103 466 90.3 Plus