Clone Sequence Records
BS15191.3prime Sequence
342 bp (342 high quality bases) assembled on 2006-10-23
> BS15191.3prime
ATGGTCTAGAAAGCTTTTCACAGGATAATAAGGAATACCTCAATGCATAT
GACTGAATTACGAAGGAGATCACATGGATGATGGGCGACGCGGGCTTTAT
GGAGCGCGTGGAGCAGCCTGATCGGTACAGGTCCTCATCCCTTTCACTGC
CATTCTTGTAACAGGATTTTGGGATATTCAGATCGCCCAACTTGTAGTCG
TCAGGTCCCAAAACTCCGCAGCACTGGCAGCGACTTTCGTAGAATTCCAA
ACTCTTGCGATTCATCCATATTCGAAGTACATCTCCAACAATTTGGTACT
GTTGTGCAAACAGTATAGTCAGCATCATGTCGACTGATAACT
BS15191.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:15:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16991-PA | 312 | Tsp66A-RA | 1..309 | 328..20 | 1545 | 100 | Minus |
CG16991-PB | 648 | Tsp66A-RB | 256..532 | 328..52 | 1385 | 100 | Minus |
CG16991-PB | 648 | Tsp66A-RB | 540..574 | 54..20 | 175 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:19:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42661-RB | 2597 | CG42661-RB | 1659..1977 | 328..20 | 1435 | 96.9 | Minus |
CG42661-RA | 2531 | CG42661-RA | 1593..1911 | 328..20 | 1435 | 96.9 | Minus |
CG42660-RB | 2597 | CG42660-RB | 1659..1977 | 328..20 | 1435 | 96.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 21:19:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7467920..7468096 | 229..53 | 885 | 100 | Minus |
3L | 28110227 | 3L | 7467760..7467858 | 328..230 | 495 | 100 | Minus |
Blast to na_te.dros performed 2015-02-04 21:19:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\ninja | 6644 | Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). | 4216..4286 | 93..163 | 103 | 60.6 | Plus |
BS15191.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:19:29 Download gff for
BS15191.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16991-PA | 1..312 | 17..328 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:53:38 Download gff for
BS15191.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16991-PA | 1..312 | 17..328 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:42:00 Download gff for
BS15191.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp66A-RA | 220..536 | 13..328 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-05 00:45:38 Download gff for
BS15191.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42660-RB | 1659..1985 | 13..328 | 96 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-05 00:45:38 Download gff for
BS15191.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7467760..7467858 | 230..328 | 100 | -> | Minus |
3L | 7467920..7468096 | 53..229 | 100 | -> | Minus |
3L | 7468156..7468186 | 22..52 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:42:00 Download gff for
BS15191.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7460860..7460958 | 230..328 | 100 | -> | Minus |
arm_3L | 7461020..7461196 | 53..229 | 100 | -> | Minus |
arm_3L | 7461256..7461286 | 22..52 | 100 | -> | Minus |
BS15191.5prime Sequence
342 bp (342 high quality bases) assembled on 2006-10-23
> BS15191.5prime
GAAGTTATCAGTCGACATGATGCTGACTATACTGTTTGCACAACAGTACC
AAATTGTTGGAGATGTACTTCGAATATGGATGAATCGCAAGAGTTTGGAA
TTCTACGAAAGTCGCTGCCAGTGCTGCGGAGTTTTGGGACCTGACGACTA
CAAGTTGGGCGATCTGAATATCCCAAAATCCTGTTACAAGAATGGCAGTG
AAAGGGATGAGGACCTGTACCGATCAGGCTGCTCCACGCGCTCCATAAAG
CCCGCGTCGCCCATCATCCATGTGATCTCCTTCGTAATTCAGTCATATGC
ATTGAGGTATTCCTTATTATCCTGTTAAAAGCTTTCTAGACC
BS15191.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:15:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16991-PA | 312 | Tsp66A-RA | 1..312 | 17..328 | 1560 | 100 | Plus |
CG16991-PB | 648 | Tsp66A-RB | 256..532 | 17..293 | 1385 | 100 | Plus |
CG16991-PB | 648 | Tsp66A-RB | 540..577 | 291..328 | 190 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:23:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42661-RB | 2597 | CG42661-RB | 1659..1980 | 17..328 | 1450 | 96.9 | Plus |
CG42661-RA | 2531 | CG42661-RA | 1593..1914 | 17..328 | 1450 | 96.9 | Plus |
CG42660-RB | 2597 | CG42660-RB | 1659..1980 | 17..328 | 1450 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:23:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7467920..7468096 | 116..292 | 885 | 100 | Plus |
3L | 28110227 | 3L | 7467760..7467858 | 17..115 | 495 | 100 | Plus |
3L | 28110227 | 3L | 7468154..7468191 | 291..328 | 190 | 100 | Plus |
Blast to na_te.dros performed 2015-02-12 10:23:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\ninja | 6644 | Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). | 4216..4286 | 252..182 | 103 | 60.6 | Minus |
BS15191.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:19:31 Download gff for
BS15191.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16991-PA | 1..312 | 17..328 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:53:40 Download gff for
BS15191.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16991-PA | 1..312 | 17..328 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:56:41 Download gff for
BS15191.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp66A-RA | 220..536 | 17..332 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:57:29 Download gff for
BS15191.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42660-RB | 1659..1985 | 17..332 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:57:29 Download gff for
BS15191.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7468156..7468196 | 293..332 | 95 | | Plus |
3L | 7467760..7467858 | 17..115 | 100 | -> | Plus |
3L | 7467920..7468096 | 116..292 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:56:41 Download gff for
BS15191.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7460860..7460958 | 17..115 | 100 | -> | Plus |
arm_3L | 7461020..7461196 | 116..292 | 100 | -> | Plus |
arm_3L | 7461256..7461296 | 293..332 | 95 | | Plus |
BS15191.complete Sequence
344 bp assembled on 2006-11-01
GenBank Submission: FJ637886
> BS15191.complete
GAAGTTATCAGTCGACATGATGCTGACTATACTGTTTGCACAACAGTACC
AAATTGTTGGAGATGTACTTCGAATATGGATGAATCGCAAGAGTTTGGAA
TTCTACGAAAGTCGCTGCCAGTGCTGCGGAGTTTTGGGACCTGACGACTA
CAAGTTGGGCGATCTGAATATCCCAAAATCCTGTTACAAGAATGGCAGTG
AAAGGGATGAGGACCTGTACCGATCAGGCTGCTCCACGCGCTCCATAAAG
CCCGCGTCGCCCATCATCCATGTGATCTCCTTCGTAATTCAGTCATATGC
ATTGAGGTATTCCTTATTATCCTGTTAAAAGCTTTCTAGACCAT
BS15191.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:58:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tsp66A-RC | 711 | CG16991-PC | 319..640 | 17..328 | 1425 | 96.9 | Plus |
Tsp66A-RD | 711 | CG16991-PD | 319..640 | 17..328 | 1425 | 96.9 | Plus |
Tsp66A-RE | 717 | CG16991-PE | 325..646 | 17..328 | 1425 | 96.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:58:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42661-RB | 2597 | CG42661-RB | 1659..1980 | 17..328 | 1425 | 96.9 | Plus |
CG42661-RA | 2531 | CG42661-RA | 1593..1914 | 17..328 | 1425 | 96.9 | Plus |
CG42660-RB | 2597 | CG42660-RB | 1659..1980 | 17..328 | 1425 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:57:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7467920..7468096 | 116..292 | 885 | 100 | Plus |
3L | 28110227 | 3L | 7467760..7467858 | 17..115 | 495 | 100 | Plus |
3L | 28110227 | 3L | 7468154..7468191 | 291..328 | 190 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 16:58:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\ninja | 6644 | Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). | 4216..4286 | 252..182 | 103 | 60.6 | Minus |
BS15191.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:44:24 Download gff for
BS15191.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp66A-RA | 1..312 | 17..328 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:11:15 Download gff for
BS15191.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp66A-RA | 220..536 | 17..332 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:14:17 Download gff for
BS15191.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp66A-RA | 220..529 | 17..326 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:44:24 Download gff for
BS15191.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp66A-RA | 220..536 | 17..332 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:31:47 Download gff for
BS15191.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42660-RB | 1659..1978 | 17..326 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:31:47 Download gff for
BS15191.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7467760..7467858 | 17..115 | 100 | -> | Plus |
3L | 7467920..7468096 | 116..292 | 100 | -> | Plus |
3L | 7468156..7468189 | 293..326 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:14:17 Download gff for
BS15191.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7460860..7460958 | 17..115 | 100 | -> | Plus |
arm_3L | 7461020..7461196 | 116..292 | 100 | -> | Plus |
arm_3L | 7461256..7461289 | 293..326 | 100 | | Plus |
BS15191.pep Sequence
Translation from 16 to 327
> BS15191.pep
MMLTILFAQQYQIVGDVLRIWMNRKSLEFYESRCQCCGVLGPDDYKLGDL
NIPKSCYKNGSERDEDLYRSGCSTRSIKPASPIIHVISFVIQSYALRYSL
LSC*
BS15191.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:39:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tsp66A-PC | 236 | CG16991-PC | 107..204 | 1..103 | 493 | 92.2 | Plus |
Tsp66A-PD | 236 | CG16991-PD | 107..204 | 1..103 | 493 | 92.2 | Plus |
Tsp66A-PE | 238 | CG16991-PE | 109..206 | 1..103 | 493 | 92.2 | Plus |
Tsp66A-PF | 234 | CG16991-PF | 107..202 | 1..103 | 466 | 90.3 | Plus |