Clone Sequence Records
BS15203.3prime Sequence
465 bp (465 high quality bases) assembled on 2006-10-24
> BS15203.3prime
ATGGTCTAGAAAGCTTTCACTTCGGTTTCGGCTTGGCTCTTCCATAAAGC
TGTTCCGGCGTCGGGATGTCGCTCACAAAGAAGTTGGCTGGAATGAAGTG
AAATATCTTCTTCAGCACATCCAGCAGAATGTCCTCGATGGTCTGGGTGA
TGACCGTGTACAGGGCATCGGCCAGCATCCGCCAGTTGTCGTTGAAGAAC
TTGTTGGTGCTGTCCTCCAGCTGCTTATTGCCATTAAACAGATTGGAGAA
GTACGACTTGAGCCCGTCCATTTTAAAATCCACGTGCAGGTTGGTCACGT
TGTAGAAAGTGAACCCACCCTTGGAGTAGAGCCGAGTCTTCGTGTGCATG
GTGACCGTCATGTTCTCCGCGTCCAGGAACACCTGGCCCTTTCCGTTGAG
CGGGATGAGCAGGATCCGACCGAAAAGACTGTAGTCCGCCTGGAGCTTCA
TGTCGACTGATAACT
BS15203.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:15:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14457-PA | 435 | CG14457-RA | 1..431 | 451..21 | 2155 | 100 | Minus |
CG14457-PB | 816 | CG14457-RB | 382..812 | 451..21 | 2155 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:24:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14457-RC | 1295 | CG14457-RC | 786..1224 | 455..17 | 2165 | 99.5 | Minus |
CG14457-RB | 1298 | CG14457-RB | 789..1227 | 455..17 | 2165 | 99.5 | Minus |
CG14457-RA | 1557 | CG14457-RA | 1048..1486 | 455..17 | 2165 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:24:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22679463..22679701 | 455..217 | 1180 | 99.6 | Minus |
3L | 28110227 | 3L | 22679763..22679963 | 217..17 | 990 | 99.5 | Minus |
Blast to na_te.dros performed 2015-02-10 22:24:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
transib3 | 2883 | transib3 TRANSIB3 2883bp | 1995..2026 | 46..15 | 106 | 81.2 | Minus |
BS15203.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:19:44 Download gff for
BS15203.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-PA | 1..435 | 17..451 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:53:57 Download gff for
BS15203.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-PB | 378..816 | 17..455 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 11:21:40 Download gff for
BS15203.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-RA | 1048..1486 | 17..455 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:06:45 Download gff for
BS15203.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-RA | 1048..1486 | 17..455 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:06:45 Download gff for
BS15203.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22679764..22679963 | 17..216 | 99 | | Minus |
3L | 22679463..22679701 | 217..455 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 11:21:40 Download gff for
BS15203.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22672563..22672801 | 217..455 | 99 | -> | Minus |
arm_3L | 22672864..22673063 | 17..216 | 99 | | Minus |
BS15203.5prime Sequence
465 bp (465 high quality bases) assembled on 2006-10-24
> BS15203.5prime
GAAGTTATCAGTCGACATGAAGCTCCAGGCGGACTACAGTCTTTTCGGTC
GGATCCTGCTCATCCCGCTCAACGGAAAGGGCCAGGTGTTCCTGGACGCG
GAGAACATGACGGTCACCATGCACACGAAGACTCGGCTCTACTCCAAGGG
TGGGTTCACTTTCTACAACGTGACCAACCTGCACGTGGATTTTAAAATGG
ACGGGCTCAAGTCGTACTTCTCCAATCTGTTTAATGGCAATAAGCAGCTG
GAGGACAGCACCAACAAGTTCTTCAACGACAACTGGCGGATGCTGGCCGA
TGCCCTGTACACGGTCATCACCCAGACCATCGAGGACATTCTGCTGGATG
TGCTGAAGAAGATATTTCACTTCATTCCAGCCAACTTCTTTGTGAGCGAC
ATCCCGACGCCGGAACAGCTTTATGGAAGAGCCAAGCCGAAACCGAAATG
AAAGCTTTCTAGACC
BS15203.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:16:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14457-PA | 435 | CG14457-RA | 1..435 | 17..451 | 2175 | 100 | Plus |
CG14457-PB | 816 | CG14457-RB | 382..816 | 17..451 | 2175 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:04:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14457-RC | 1295 | CG14457-RC | 786..1224 | 13..451 | 2180 | 99.8 | Plus |
CG14457-RB | 1298 | CG14457-RB | 789..1227 | 13..451 | 2180 | 99.8 | Plus |
CG14457-RA | 1557 | CG14457-RA | 1048..1486 | 13..451 | 2180 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:04:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22679463..22679701 | 13..251 | 1180 | 99.6 | Plus |
3L | 28110227 | 3L | 22679763..22679963 | 251..451 | 1005 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 16:04:52 has no hits.
BS15203.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:19:45 Download gff for
BS15203.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-PA | 1..435 | 17..451 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:53:59 Download gff for
BS15203.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-PB | 378..816 | 13..451 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:24:25 Download gff for
BS15203.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-RA | 1048..1486 | 13..451 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:40:32 Download gff for
BS15203.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-RA | 1048..1486 | 13..451 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:40:32 Download gff for
BS15203.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22679463..22679701 | 13..251 | 99 | -> | Plus |
3L | 22679764..22679963 | 252..451 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:24:25 Download gff for
BS15203.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22672563..22672801 | 13..251 | 99 | -> | Plus |
arm_3L | 22672864..22673063 | 252..451 | 100 | | Plus |
BS15203.complete Sequence
467 bp assembled on 2006-11-01
GenBank Submission: FJ637889
> BS15203.complete
GAAGTTATCAGTCGACATGAAGCTCCAGGCGGACTACAGTCTTTTCGGTC
GGATCCTGCTCATCCCGCTCAACGGAAAGGGCCAGGTGTTCCTGGACGCG
GAGAACATGACGGTCACCATGCACACGAAGACTCGGCTCTACTCCAAGGG
TGGGTTCACTTTCTACAACGTGACCAACCTGCACGTGGATTTTAAAATGG
ACGGGCTCAAGTCGTACTTCTCCAATCTGTTTAATGGCAATAAGCAGCTG
GAGGACAGCACCAACAAGTTCTTCAACGACAACTGGCGGATGCTGGCCGA
TGCCCTGTACACGGTCATCACCCAGACCATCGAGGACATTCTGCTGGATG
TGCTGAAGAAGATATTTCACTTCATTCCAGCCAACTTCTTTGTGAGCGAC
ATCCCGACGCCGGAACAGCTTTATGGAAGAGCCAAGCCGAAACCGAAATG
AAAGCTTTCTAGACCAT
BS15203.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:41:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14457-RC | 813 | CG14457-PC | 375..813 | 13..451 | 2180 | 99.8 | Plus |
CG14457-RB | 816 | CG14457-PB | 378..816 | 13..451 | 2180 | 99.8 | Plus |
CG14457-RA | 435 | CG14457-PA | 1..435 | 17..451 | 2175 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:41:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14457-RC | 1295 | CG14457-RC | 786..1224 | 13..451 | 2180 | 99.8 | Plus |
CG14457-RB | 1298 | CG14457-RB | 789..1227 | 13..451 | 2180 | 99.8 | Plus |
CG14457-RA | 1557 | CG14457-RA | 1048..1486 | 13..451 | 2180 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:41:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22679463..22679701 | 13..251 | 1180 | 99.6 | Plus |
3L | 28110227 | 3L | 22679763..22679963 | 251..451 | 1005 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 23:41:06 has no hits.
BS15203.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:13:04 Download gff for
BS15203.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-RB | 378..816 | 13..451 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:52:57 Download gff for
BS15203.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-RA | 1048..1486 | 13..451 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:35:21 Download gff for
BS15203.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-RA | 1052..1485 | 17..450 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:13:04 Download gff for
BS15203.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-RA | 1048..1486 | 13..451 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:06:06 Download gff for
BS15203.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-RA | 1052..1485 | 17..450 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:06:06 Download gff for
BS15203.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22679467..22679701 | 17..251 | 100 | -> | Plus |
3L | 22679764..22679962 | 252..450 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:35:21 Download gff for
BS15203.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22672567..22672801 | 17..251 | 100 | -> | Plus |
arm_3L | 22672864..22673062 | 252..450 | 100 | | Plus |
BS15203.pep Sequence
Translation from 16 to 450
> BS15203.pep
MKLQADYSLFGRILLIPLNGKGQVFLDAENMTVTMHTKTRLYSKGGFTFY
NVTNLHVDFKMDGLKSYFSNLFNGNKQLEDSTNKFFNDNWRMLADALYTV
ITQTIEDILLDVLKKIFHFIPANFFVSDIPTPEQLYGRAKPKPK*
BS15203.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:38:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14457-PA | 144 | CG14457-PA | 1..144 | 1..144 | 757 | 100 | Plus |
CG14457-PC | 270 | CG14457-PC | 127..270 | 1..144 | 757 | 100 | Plus |
CG14457-PB | 271 | CG14457-PB | 128..271 | 1..144 | 757 | 100 | Plus |
CG14259-PA | 289 | CG14259-PA | 143..280 | 1..137 | 404 | 52.9 | Plus |
CG17189-PA | 264 | CG17189-PA | 120..258 | 1..138 | 373 | 48.9 | Plus |