Clone BS15203 Report

Search the DGRC for BS15203

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:152
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptCG14457-RA
Protein status:BS15203.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15203.3prime Sequence

465 bp (465 high quality bases) assembled on 2006-10-24

> BS15203.3prime
ATGGTCTAGAAAGCTTTCACTTCGGTTTCGGCTTGGCTCTTCCATAAAGC
TGTTCCGGCGTCGGGATGTCGCTCACAAAGAAGTTGGCTGGAATGAAGTG
AAATATCTTCTTCAGCACATCCAGCAGAATGTCCTCGATGGTCTGGGTGA
TGACCGTGTACAGGGCATCGGCCAGCATCCGCCAGTTGTCGTTGAAGAAC
TTGTTGGTGCTGTCCTCCAGCTGCTTATTGCCATTAAACAGATTGGAGAA
GTACGACTTGAGCCCGTCCATTTTAAAATCCACGTGCAGGTTGGTCACGT
TGTAGAAAGTGAACCCACCCTTGGAGTAGAGCCGAGTCTTCGTGTGCATG
GTGACCGTCATGTTCTCCGCGTCCAGGAACACCTGGCCCTTTCCGTTGAG
CGGGATGAGCAGGATCCGACCGAAAAGACTGTAGTCCGCCTGGAGCTTCA
TGTCGACTGATAACT

BS15203.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:15:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG14457-PA 435 CG14457-RA 1..431 451..21 2155 100 Minus
CG14457-PB 816 CG14457-RB 382..812 451..21 2155 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:24:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG14457-RC 1295 CG14457-RC 786..1224 455..17 2165 99.5 Minus
CG14457-RB 1298 CG14457-RB 789..1227 455..17 2165 99.5 Minus
CG14457-RA 1557 CG14457-RA 1048..1486 455..17 2165 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:24:12
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22679463..22679701 455..217 1180 99.6 Minus
3L 28110227 3L 22679763..22679963 217..17 990 99.5 Minus
Blast to na_te.dros performed 2015-02-10 22:24:16
Subject Length Description Subject Range Query Range Score Percent Strand
transib3 2883 transib3 TRANSIB3 2883bp 1995..2026 46..15 106 81.2 Minus

BS15203.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:19:44 Download gff for BS15203.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14457-PA 1..435 17..451 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:53:57 Download gff for BS15203.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14457-PB 378..816 17..455 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 11:21:40 Download gff for BS15203.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14457-RA 1048..1486 17..455 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:06:45 Download gff for BS15203.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14457-RA 1048..1486 17..455 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:06:45 Download gff for BS15203.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 22679764..22679963 17..216 99   Minus
3L 22679463..22679701 217..455 99 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 11:21:40 Download gff for BS15203.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22672563..22672801 217..455 99 -> Minus
arm_3L 22672864..22673063 17..216 99   Minus

BS15203.5prime Sequence

465 bp (465 high quality bases) assembled on 2006-10-24

> BS15203.5prime
GAAGTTATCAGTCGACATGAAGCTCCAGGCGGACTACAGTCTTTTCGGTC
GGATCCTGCTCATCCCGCTCAACGGAAAGGGCCAGGTGTTCCTGGACGCG
GAGAACATGACGGTCACCATGCACACGAAGACTCGGCTCTACTCCAAGGG
TGGGTTCACTTTCTACAACGTGACCAACCTGCACGTGGATTTTAAAATGG
ACGGGCTCAAGTCGTACTTCTCCAATCTGTTTAATGGCAATAAGCAGCTG
GAGGACAGCACCAACAAGTTCTTCAACGACAACTGGCGGATGCTGGCCGA
TGCCCTGTACACGGTCATCACCCAGACCATCGAGGACATTCTGCTGGATG
TGCTGAAGAAGATATTTCACTTCATTCCAGCCAACTTCTTTGTGAGCGAC
ATCCCGACGCCGGAACAGCTTTATGGAAGAGCCAAGCCGAAACCGAAATG
AAAGCTTTCTAGACC

BS15203.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:16:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG14457-PA 435 CG14457-RA 1..435 17..451 2175 100 Plus
CG14457-PB 816 CG14457-RB 382..816 17..451 2175 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:04:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG14457-RC 1295 CG14457-RC 786..1224 13..451 2180 99.8 Plus
CG14457-RB 1298 CG14457-RB 789..1227 13..451 2180 99.8 Plus
CG14457-RA 1557 CG14457-RA 1048..1486 13..451 2180 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:04:49
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22679463..22679701 13..251 1180 99.6 Plus
3L 28110227 3L 22679763..22679963 251..451 1005 100 Plus
Blast to na_te.dros performed on 2015-02-12 16:04:52 has no hits.

BS15203.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:19:45 Download gff for BS15203.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14457-PA 1..435 17..451 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:53:59 Download gff for BS15203.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14457-PB 378..816 13..451 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:24:25 Download gff for BS15203.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14457-RA 1048..1486 13..451 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:40:32 Download gff for BS15203.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14457-RA 1048..1486 13..451 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:40:32 Download gff for BS15203.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 22679463..22679701 13..251 99 -> Plus
3L 22679764..22679963 252..451 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:24:25 Download gff for BS15203.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22672563..22672801 13..251 99 -> Plus
arm_3L 22672864..22673063 252..451 100   Plus

BS15203.complete Sequence

467 bp assembled on 2006-11-01

GenBank Submission: FJ637889

> BS15203.complete
GAAGTTATCAGTCGACATGAAGCTCCAGGCGGACTACAGTCTTTTCGGTC
GGATCCTGCTCATCCCGCTCAACGGAAAGGGCCAGGTGTTCCTGGACGCG
GAGAACATGACGGTCACCATGCACACGAAGACTCGGCTCTACTCCAAGGG
TGGGTTCACTTTCTACAACGTGACCAACCTGCACGTGGATTTTAAAATGG
ACGGGCTCAAGTCGTACTTCTCCAATCTGTTTAATGGCAATAAGCAGCTG
GAGGACAGCACCAACAAGTTCTTCAACGACAACTGGCGGATGCTGGCCGA
TGCCCTGTACACGGTCATCACCCAGACCATCGAGGACATTCTGCTGGATG
TGCTGAAGAAGATATTTCACTTCATTCCAGCCAACTTCTTTGTGAGCGAC
ATCCCGACGCCGGAACAGCTTTATGGAAGAGCCAAGCCGAAACCGAAATG
AAAGCTTTCTAGACCAT

BS15203.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:41:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG14457-RC 813 CG14457-PC 375..813 13..451 2180 99.8 Plus
CG14457-RB 816 CG14457-PB 378..816 13..451 2180 99.8 Plus
CG14457-RA 435 CG14457-PA 1..435 17..451 2175 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:41:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG14457-RC 1295 CG14457-RC 786..1224 13..451 2180 99.8 Plus
CG14457-RB 1298 CG14457-RB 789..1227 13..451 2180 99.8 Plus
CG14457-RA 1557 CG14457-RA 1048..1486 13..451 2180 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:41:05
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22679463..22679701 13..251 1180 99.6 Plus
3L 28110227 3L 22679763..22679963 251..451 1005 100 Plus
Blast to na_te.dros performed on 2014-11-27 23:41:06 has no hits.

BS15203.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:13:04 Download gff for BS15203.complete
Subject Subject Range Query Range Percent Splice Strand
CG14457-RB 378..816 13..451 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:52:57 Download gff for BS15203.complete
Subject Subject Range Query Range Percent Splice Strand
CG14457-RA 1048..1486 13..451 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:35:21 Download gff for BS15203.complete
Subject Subject Range Query Range Percent Splice Strand
CG14457-RA 1052..1485 17..450 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:13:04 Download gff for BS15203.complete
Subject Subject Range Query Range Percent Splice Strand
CG14457-RA 1048..1486 13..451 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:06:06 Download gff for BS15203.complete
Subject Subject Range Query Range Percent Splice Strand
CG14457-RA 1052..1485 17..450 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:06:06 Download gff for BS15203.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22679467..22679701 17..251 100 -> Plus
3L 22679764..22679962 252..450 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:35:21 Download gff for BS15203.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22672567..22672801 17..251 100 -> Plus
arm_3L 22672864..22673062 252..450 100   Plus

BS15203.pep Sequence

Translation from 16 to 450

> BS15203.pep
MKLQADYSLFGRILLIPLNGKGQVFLDAENMTVTMHTKTRLYSKGGFTFY
NVTNLHVDFKMDGLKSYFSNLFNGNKQLEDSTNKFFNDNWRMLADALYTV
ITQTIEDILLDVLKKIFHFIPANFFVSDIPTPEQLYGRAKPKPK*

BS15203.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:38:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG14457-PA 144 CG14457-PA 1..144 1..144 757 100 Plus
CG14457-PC 270 CG14457-PC 127..270 1..144 757 100 Plus
CG14457-PB 271 CG14457-PB 128..271 1..144 757 100 Plus
CG14259-PA 289 CG14259-PA 143..280 1..137 404 52.9 Plus
CG17189-PA 264 CG17189-PA 120..258 1..138 373 48.9 Plus