Clone Sequence Records
BS15205.complete Sequence
1532 bp assembled on 2009-12-07
GenBank Submission: KX800303
> BS15205.complete
GAAGTTATCAGTCGACATGCGACTGCCATATCGAAATAAGAAGGTCACCC
TGTGGGTGCTCTTCGGCATCATCGTCATCACCATGTTCCTATTCAAATTC
ACCGAACTGCGGCCCACATGCCTCTTCAAGGTGGACGCCGCCAACGAGCT
CTCCTCCCAAATGGTTCGCGTTGAGAAATACCTCACAGATGACAATCAAC
GCGTTTATTCATACAACCGTGAGATGCCATTAATATTCATAGGCGGCGTG
CCGAGATCTGGGACGACTTTGATGCGCGCCATGCTGGATGCCCATCCCGA
TGTGCGCTGCGGGCAGGAAACCCGTGTCATTCCGCGCATCCTGCAGCTGC
GCTCGCACTGGCTGAAGTCCGAGAAGGAGTCGCTCCGCCTGCAGGAGGCC
GGCATCACCAAAGAGGTCATGAACAGTGCCATCGCGCAGTTCTGTCTGGA
AATCATCGCCAAACACGGCGAGCCGGCGCCGCGCTTATGCAACAAGGATC
CGCTGACGCTGAAAATGGGCTCCTATGTCATCGAGCTATTTCCGAACGCT
AAATTCCTATTCATGGTGCGCGACGGCCGGGCGACAGTTCATTCGATTAT
ATCGCGCAAGGTGACAATCACCGGCTTCGATTTGAGCAGCTACCGGCAGT
GCATGCAGAAGTGGAACCACGCCATCGAGGTGATGCACGAGCAGTGCCGG
GACATCGGCAAGGACCGCTGCATGATGGTTTACTATGAGCAGCTGGTACT
GCATCCCGAGGAGTGGATGCGAAAGATACTGAAATTCCTGGACGTGCCAT
GGAACGATGCGGTGCTGCACCACGAGGAGTTCATAAATAAACCGAACGGT
GTGCCTCTGTCCAAGGTGGAACGTTCGTCGGACCAGGTTATCAAGCCGGT
TAATCTGGAGGCGATGTCCAAATGGGTTGGCCAAATACCCGGCGACGTGG
TGCGCGACATGGCCGACATAGCGCCCATGCTGTCCGTGCTCGGCTACGAT
CCGTACGCGAATCCGCCGGACTATGGTAAGCCAGATGCATGGGTGCAGGA
CAACACGTCGAAGTTAAAGGCCAATCGAATGCTGTGGGAGAGTAAGGCGA
AGCAAGTGCTGCAGATGTCATCCAGCGAGGATGACAACACGAACACCATC
ATCAACAATAGCAACAATAAGGATAACAACAATAATCAGTACACAATCAA
TAAAATTATACCAGAACAACACAGCAGACAGCGGCAACATGTACAGCAGC
AACATCTGCAGCAGCAGCAGCAGCAGCATCTGCAACAGCAGCAACATCAG
CGGCAGCAGCAACAGCAGCAACGTGAGGAGGAGAGCGAGTCGGAAAGGGA
AGCGGAACCGGATCGAGAACAACAATTGTTGCATCAAAAGCCAAAGGATG
TCATTACGATAAAGCAGCTGCCATTAGCTGGGAGCAACAATAACAACATC
AACAATAACATCAACAACAACAACAACAACAACAACATCATGGAGGACCC
CATGGCGGATACATGAAAGCTTTCTAGACCAT
BS15205.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:58:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tango13-RE | 1500 | CG32632-PE | 1..1500 | 17..1516 | 7500 | 100 | Plus |
Tango13-RF | 1542 | CG32632-PF | 1..1500 | 17..1516 | 7500 | 100 | Plus |
Tango13-RB | 1500 | CG32632-PB | 1..1500 | 17..1516 | 7500 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:58:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tango13-RE | 6036 | CG32632-RE | 1687..3186 | 17..1516 | 7500 | 100 | Plus |
Tango13-RF | 2734 | CG32632-RF | 1039..2538 | 17..1516 | 7500 | 100 | Plus |
Tango13-RB | 2734 | CG32632-RB | 1039..2538 | 17..1516 | 7500 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:58:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13589920..13590374 | 1062..1516 | 2275 | 100 | Plus |
X | 23542271 | X | 13584156..13584398 | 306..548 | 1215 | 100 | Plus |
X | 23542271 | X | 13585894..13586096 | 865..1067 | 1000 | 99.5 | Plus |
X | 23542271 | X | 13584861..13585042 | 548..729 | 910 | 100 | Plus |
X | 23542271 | X | 13577506..13577664 | 17..175 | 795 | 100 | Plus |
X | 23542271 | X | 13585690..13585828 | 727..865 | 695 | 100 | Plus |
X | 23542271 | X | 13580048..13580185 | 169..306 | 675 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:58:32 has no hits.
BS15205.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:43:50 Download gff for
BS15205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tango13-RB | 1039..2537 | 17..1515 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:02:39 Download gff for
BS15205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tango13-RB | 1039..2537 | 17..1515 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:04:21 Download gff for
BS15205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tango13-RB | 1039..2537 | 17..1515 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:01:03 Download gff for
BS15205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tango13-RB | 1039..2537 | 17..1515 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:01:03 Download gff for
BS15205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13585894..13586092 | 865..1063 | 100 | -> | Plus |
X | 13577506..13577664 | 17..175 | 100 | -> | Plus |
X | 13580055..13580185 | 176..306 | 100 | -> | Plus |
X | 13584157..13584397 | 307..547 | 100 | -> | Plus |
X | 13584861..13585040 | 548..727 | 100 | -> | Plus |
X | 13585691..13585827 | 728..864 | 100 | -> | Plus |
X | 13589922..13590373 | 1064..1515 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:02:39 Download gff for
BS15205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13479927..13480125 | 865..1063 | 100 | -> | Plus |
arm_X | 13471539..13471697 | 17..175 | 100 | -> | Plus |
arm_X | 13474088..13474218 | 176..306 | 100 | -> | Plus |
arm_X | 13478190..13478430 | 307..547 | 100 | -> | Plus |
arm_X | 13478894..13479073 | 548..727 | 100 | -> | Plus |
arm_X | 13479724..13479860 | 728..864 | 100 | -> | Plus |
arm_X | 13483955..13484406 | 1064..1515 | 100 | | Plus |
BS15205.3prime Sequence
812 bp (662 high quality bases) assembled on 2006-10-24
> BS15205.3prime
ATGGTCTAGAAAGCTTTCACGTTTCCGCCATGGGGTCCTCCATGATGTTG
TTGTTGTTGTTGTTGTTGTTGATGTTATTGTTGATGTTGTTATTGTTGCT
CCCAGCTAATGGCAGCTGCTTTATCGTAATGACATCCTTTGGCTTTTGAT
GCAACAATTGTTGTTCTCGATCCGGTTCCGCTTCCCTTTCCGACTCGCTC
TCCTCCTCACGTTGCTGCTGTTGCTGCTGCCGCTGATGTTGCTGCTGTTG
CAGATGCTGCTGCTGCTGCTGCTGCAGATGTTGCTGCTGTACATGTTGCC
GCTGTCTGCTGTGTTGTTCTGGTATAATTTTATTGATTGTGTACTGATTA
TTGTTGTTATCCTTATTGTTGCTATTGTTGATGATGGTGTTCGTGTTGTC
ATCCTCGCTGGATGACATCTGCAGCACTTGCTTCGCCTTACTCTCCCACA
GCATTCGATTGGCCTTTAACTTCGACGTGTTGTCCTGCACCCATGCATCT
GGCTTACCATAGTCCGGCGGATTCGCGTACGGATCGTAGCCGAGCACGGA
CAGCATGGGCGCTATGTCGGCCATGTCGCGCACCACGTCGCCGGGTATTT
GGCCAACCCATTTGGACATCGCCTCCAGATTAACCGGCTTGATAACCTGG
TCCGACGAACGTTCCACCTTGGACAGAGGCACACCGTTCGGTTTATTTAT
GAACTCCTCGTGGTGCAACACCGCATCGTTCCATGGCACGTCCAGGAATT
TCAGTATCTTTCGCATCCACTCCTCGGGATGCAGTACCAGCTGCTCATAA
TAAACCATCATG
BS15205.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:16:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32632-PB | 1500 | CG32632-RB | 705..1493 | 812..24 | 3895 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:24:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tango13-RE | 6036 | CG32632-RE | 2391..3186 | 812..17 | 3920 | 99.5 | Minus |
Tango13-RF | 2734 | CG32632-RF | 1743..2538 | 812..17 | 3920 | 99.5 | Minus |
Tango13-RB | 2734 | CG32632-RB | 1743..2538 | 812..17 | 3920 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:24:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13589920..13590374 | 471..17 | 2245 | 99.6 | Minus |
X | 23542271 | X | 13585894..13586096 | 668..466 | 1000 | 99.5 | Minus |
X | 23542271 | X | 13585690..13585828 | 806..668 | 665 | 98.6 | Minus |
Blast to na_te.dros performed 2015-02-12 10:24:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 5636..5714 | 399..320 | 109 | 61.3 | Minus |
HMS-Beagle2 | 7220 | HMS-Beagle2 Beagle2 7220bp | 5903..5938 | 364..329 | 108 | 77.8 | Minus |
BS15205.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:19:46 Download gff for
BS15205.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32632-PB | 705..1500 | 17..812 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:54:01 Download gff for
BS15205.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32632-PB | 705..1500 | 17..812 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:57:02 Download gff for
BS15205.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tango13-RB | 1743..2538 | 17..812 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:00:40 Download gff for
BS15205.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tango13-RB | 1743..2538 | 17..812 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:00:40 Download gff for
BS15205.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13585684..13585827 | 669..812 | 95 | -> | Minus |
X | 13585894..13586092 | 470..668 | 100 | -> | Minus |
X | 13589922..13590374 | 17..469 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:57:02 Download gff for
BS15205.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13479717..13479860 | 669..812 | 95 | -> | Minus |
arm_X | 13479927..13480125 | 470..668 | 100 | -> | Minus |
arm_X | 13483955..13484407 | 17..469 | 99 | | Minus |
BS15205.5prime Sequence
824 bp (761 high quality bases) assembled on 2006-10-24
> BS15205.5prime
GAAGTTATCAGTCGACATGCGACTGCCATATCGAAATAAGAAGGTCACCC
TGTGGGTGCTCTTCGGCATCATCGTCATCACCATGTTCCTATTCAAATTC
ACCGAACTGCGGCCCACATGCCTCTTCAAGGTGGACGCCGCCAACGAGCT
CTCCTCCCAAATGGTTCGCGTTGAGAAATACCTCACAGATGACAATCAAC
GCGTTTATTCATACAACCGTGAGATGCCATTAATATTCATAGGCGGCGTG
CCGAGATCTGGGACGACTTTGATGCGCGCCATGCTGGATGCCCATCCCGA
TGTGCGCTGCGGGCAGGAAACCCGTGTCATTCCGCGCATCCTGCAGCTGC
GCTCGCACTGGCTGAAGTCCGAGAAGGAGTCGCTCCGCCTGCAGGAGGCC
GGCATCACCAAAGAGGTCATGAACAGTGCCATCGCGCAGTTCTGTCTGGA
AATCATCGCCAAACACGGCGAGCCGGCGCCGCGCTTATGCAACAAGGATC
CGCTGACGCTGAAAATGGGCTCCTATGTCATCGAGCTATTTCCGAACGCT
AAATTCCTATTCATGGTGCGCGACGGCCGGGCGACAGTTCATTCGATTAT
ATCGCGCAAGGTGACAATCACCGGCTTCGATTTGAGCAGCTACCGGCAGT
GCATGCAGAAGTGGAACCACGCCATCGAGGTGATGCACGAGCAGTGCCGG
GACATCGGCAAGGACCGCTGCATGATGGTTTACTATGAGCAGCTGGTACT
GCATCCCGAGGAGTGGATGCGAAAGATACTGAAATTCCTGGACGTGCCAT
GGAACGATGCGGTGCTGCACCACG
BS15205.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:16:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32632-PB | 1500 | CG32632-RB | 1..808 | 17..824 | 4040 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:13:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tango13-RG | 4728 | CG32632-RG | 1881..2688 | 17..824 | 4040 | 100 | Plus |
Tango13-RE | 6036 | CG32632-RE | 1687..2494 | 17..824 | 4040 | 100 | Plus |
Tango13-RD | 4534 | CG32632-RD | 1687..2494 | 17..824 | 4040 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:13:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13584156..13584398 | 306..548 | 1215 | 100 | Plus |
X | 23542271 | X | 13584861..13585042 | 548..729 | 910 | 100 | Plus |
X | 23542271 | X | 13577506..13577664 | 17..175 | 795 | 100 | Plus |
X | 23542271 | X | 13580048..13580185 | 169..306 | 675 | 99.3 | Plus |
X | 23542271 | X | 13585690..13585787 | 727..824 | 490 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 23:13:34 has no hits.
BS15205.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:19:47 Download gff for
BS15205.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32632-PB | 1..808 | 17..824 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:54:03 Download gff for
BS15205.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32632-PB | 1..808 | 17..824 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:35:29 Download gff for
BS15205.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tango13-RD | 1678..2494 | 7..824 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:43:57 Download gff for
BS15205.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tango13-RD | 1678..2494 | 7..824 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:43:57 Download gff for
BS15205.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13584157..13584397 | 307..547 | 100 | -> | Plus |
X | 13584861..13585040 | 548..727 | 100 | -> | Plus |
X | 13585691..13585787 | 728..824 | 100 | | Plus |
X | 13577497..13577664 | 7..175 | 97 | -> | Plus |
X | 13580055..13580185 | 176..306 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:35:29 Download gff for
BS15205.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13471530..13471697 | 7..175 | 97 | -> | Plus |
arm_X | 13474088..13474218 | 176..306 | 100 | -> | Plus |
arm_X | 13478190..13478430 | 307..547 | 100 | -> | Plus |
arm_X | 13478894..13479073 | 548..727 | 100 | -> | Plus |
arm_X | 13479724..13479820 | 728..824 | 100 | | Plus |
BS15205.pep Sequence
Translation from 16 to 1515
> BS15205.pep
MRLPYRNKKVTLWVLFGIIVITMFLFKFTELRPTCLFKVDAANELSSQMV
RVEKYLTDDNQRVYSYNREMPLIFIGGVPRSGTTLMRAMLDAHPDVRCGQ
ETRVIPRILQLRSHWLKSEKESLRLQEAGITKEVMNSAIAQFCLEIIAKH
GEPAPRLCNKDPLTLKMGSYVIELFPNAKFLFMVRDGRATVHSIISRKVT
ITGFDLSSYRQCMQKWNHAIEVMHEQCRDIGKDRCMMVYYEQLVLHPEEW
MRKILKFLDVPWNDAVLHHEEFINKPNGVPLSKVERSSDQVIKPVNLEAM
SKWVGQIPGDVVRDMADIAPMLSVLGYDPYANPPDYGKPDAWVQDNTSKL
KANRMLWESKAKQVLQMSSSEDDNTNTIINNSNNKDNNNNQYTINKIIPE
QHSRQRQHVQQQHLQQQQQQHLQQQQHQRQQQQQQREEESESEREAEPDR
EQQLLHQKPKDVITIKQLPLAGSNNNNINNNINNNNNNNNIMEDPMADT*
BS15205.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:05:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tango13-PE | 499 | CG32632-PE | 1..499 | 1..499 | 2634 | 100 | Plus |
Tango13-PF | 513 | CG32632-PF | 1..499 | 1..499 | 2634 | 100 | Plus |
Tango13-PB | 499 | CG32632-PB | 1..499 | 1..499 | 2634 | 100 | Plus |
Tango13-PG | 346 | CG32632-PG | 1..338 | 1..338 | 1777 | 99.7 | Plus |
Tango13-PD | 346 | CG32632-PD | 1..338 | 1..338 | 1777 | 99.7 | Plus |