Clone BS15210 Report

Search the DGRC for BS15210

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:152
Well:10
Vector:pDNR-Dual
Associated Gene/TranscriptCG8664-RA
Protein status:BS15210.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15210.3prime Sequence

674 bp (530 high quality bases) assembled on 2006-10-24

> BS15210.3prime
ATGGTCTANAAAGTAGGACGTCATGCTGGCTATGCAGGTATTGATGTTGG
GCACAAAGGCGTTGCAGCCGTCGACCGCCTTCTTGGTGGCATCGACGTAG
CAGGAAGAGGTGTTGAAGGGCAGGGCTGCGCCCTGCTTGATCAATGTGTT
CATGCGGCGGACAAGGGACATGGTGGCGTAGAAGGCCTTCAGGGTGCAAC
GCATGAAGCTCTTGGTGGAGGAGACGACGCTCCTGGAGGTGGAGGCGCAC
AGCTCGGACTTCATGTTGATGATCTTGTTGCTGGTGATGATCATTTGCTT
GACATTGTTCAGCATGGCCTGGATATCCTTGGGAATATCGCCGGTGCAGG
TGCTCAGGTCGTCTACGTAGTTGGTGCAGGTGAGCAGCACATTGGCCACC
TCCTCGACGATGCACTTGGTGCCGTTGATGCCCTTGTATCCGGCCCACAG
AATCTTGCGGCACGATCCAATGAAGCCGAACTGCTCGACGCCCATGAACT
CATCCTCCATTGCCATCAACTCGGCGGCGTAGAGATCCTTAAGCTCGGCA
TCGGTGTAGGGCTCGAAGTCCTCGAAAGCACCTACGGCACTGGCGTTCGC
TGTGGCCAGAAGGAAGCTGGCAGAGGCCACGACCAAGAGGCAGACGTTGA
GTACTTTCATGTCCACTGATAACT

BS15210.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:16:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG8664-PA 645 CG8664-RA 1..641 660..20 3180 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:56:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG8664-RB 1571 CG8664-RB 32..674 662..20 3200 99.8 Minus
CG8664-RA 712 CG8664-RA 32..674 662..20 3200 99.8 Minus
CG5445-RG 2047 CG5445-RG 132..200 594..662 345 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:56:12
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17281815..17282389 20..594 2860 99.8 Plus
X 23542271 X 17282627..17282695 594..662 345 100 Plus
Blast to na_te.dros performed 2015-02-12 05:56:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6900 381..204 122 54.9 Minus

BS15210.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:19:56 Download gff for BS15210.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8664-PA 1..645 16..660 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:54:16 Download gff for BS15210.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8664-PA 1..645 16..660 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 06:30:27 Download gff for BS15210.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8664-RA 12..659 20..668 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:52:43 Download gff for BS15210.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8664-RA 27..674 20..668 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:52:43 Download gff for BS15210.3prime
Subject Subject Range Query Range Percent Splice Strand
X 17281815..17282389 20..594 99 <- Plus
X 17282628..17282700 595..668 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 06:30:27 Download gff for BS15210.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 17175848..17176422 20..594 99 <- Plus
arm_X 17176661..17176733 595..668 97   Plus

BS15210.5prime Sequence

675 bp (675 high quality bases) assembled on 2006-10-24

> BS15210.5prime
GAAGTTATCAGTCGACATGAAAGTACTCAACGTCTGCCTCTTGGTCGTGG
CCTCTGCCAGCTTCCTTCTGGCCACAGCGAACGCCAGTGCCGTAGGTGCT
TTCGAGGACTTCGAGCCCTACACCGATGCCGAGCTTAAGGATCTCTACGC
CGCCGAGTTGATGGCAATGGAGGATGAGTTCATGGGCGTCGAGCAGTTCG
GCTTCATTGGATCGTGCCGCAAGATTCTGTGGGCCGGATACAAGGGCATC
AACGGCACCAAGTGCATCGTCGAGGAGGTGGCCAATGTGCTGCTCACCTG
CACCAACTACGTAGACGACCTGAGCACCTGCACCGGCGATATTCCCAAGG
ATATCCAGGCCATGCTGAACAATGTCAAGCAAATGATCATCACCAGCAAC
AAGATCATCAACATGAAGTCCGAGCTGTGCGCCTCCACCTCCAGGAGCGT
CGTCTCCTCCACCAAGAGCTTCATGCGTTGCACCCTGAAGGCCTTCTACG
CCACCATGTCCCTTGTCCGCCGCATGAACACATTGATCAAGCAGGGCGCA
GCCCTGCCCTTCAACACCTCTTCCTGCTACGTCGATGCCACCAAGAAGGT
GGTCGACGGCTGCAACGCCTTTGTGCCCAACATCAATACCTGCATAGCCA
GCATGACATAAAAGCTTTCTAGACC

BS15210.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:16:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG8664-PA 645 CG8664-RA 1..645 17..661 3225 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:29:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG8664-RB 1571 CG8664-RB 32..678 15..661 3235 100 Plus
CG8664-RA 712 CG8664-RA 32..678 15..661 3235 100 Plus
CG5445-RG 2047 CG5445-RG 132..200 83..15 345 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:29:29
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17281811..17282389 661..83 2895 100 Minus
X 23542271 X 17282627..17282695 83..15 345 100 Minus
Blast to na_te.dros performed 2015-02-11 03:29:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6900 296..473 122 54.9 Plus

BS15210.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:19:57 Download gff for BS15210.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8664-PA 1..645 17..661 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:54:19 Download gff for BS15210.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8664-PA 1..645 17..661 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 21:05:35 Download gff for BS15210.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8664-RA 12..666 9..667 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 06:05:53 Download gff for BS15210.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8664-RA 27..681 9..667 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 06:05:53 Download gff for BS15210.5prime
Subject Subject Range Query Range Percent Splice Strand
X 17281808..17282389 83..667 99 <- Minus
X 17282628..17282700 9..82 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 21:05:35 Download gff for BS15210.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 17175841..17176422 83..667 99 <- Minus
arm_X 17176661..17176733 9..82 97   Minus

BS15210.complete Sequence

677 bp assembled on 2006-11-01

> BS15210.complete
GAAGTTATCAGTCGACATGAAAGTACTCAACGTCTGCCTCTTGGTCGTGG
CCTCTGCCAGCTTCCTTCTGGCCACAGCGAACGCCAGTGCCGTAGGTGCT
TTCGAGGACTTCGAGCCCTACACCGATGCCGAGCTTAAGGATCTCTACGC
CGCCGAGTTGATGGCAATGGAGGATGAGTTCATGGGCGTCGAGCAGTTCG
GCTTCATTGGATCGTGCCGCAAGATTCTGTGGGCCGGATACAAGGGCATC
AACGGCACCAAGTGCATCGTCGAGGAGGTGGCCAATGTGCTGCTCACCTG
CACCAACTACGTAGACGACCTGAGCACCTGCACCGGCGATATTCCCAAGG
ATATCCAGGCCATGCTGAACAATGTCAAGCAAATGATCATCACCAGCAAC
AAGATCATCAACATGAAGTCCGAGCTGTGCGCCTCCACCTCCAGGAGCGT
CGTCTCCTCCACCAAGAGCTTCATGCGTTGCACCCTGAAGGCCTTCTACG
CCACCATGTCCCTTGTCCGCCGCATGAACACATTGATCAAGCAGGGCGCA
GCCCTGCCCTTCAACACCTCTTCCTGCTACGTCGATGCCACCAAGAAGGT
GGTCGACGGCTGCAACGCCTTTGTGCCCAACATCAATACCTGCATAGCCA
GCATGACATAAAAGCTTTCTAGACCAT

BS15210.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:07:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG8664-RB 645 CG8664-PB 1..645 17..661 3225 100 Plus
CG8664-RA 645 CG8664-PA 1..645 17..661 3225 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:07:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG8664-RB 1571 CG8664-RB 32..678 15..661 3235 100 Plus
CG8664-RA 712 CG8664-RA 32..678 15..661 3235 100 Plus
CG5445-RG 2047 CG5445-RG 132..200 83..15 345 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:07:47
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17281811..17282389 661..83 2895 100 Minus
X 23542271 X 17282627..17282695 83..15 345 100 Minus
Blast to na_te.dros performed 2014-11-27 14:07:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6900 296..473 122 54.9 Plus

BS15210.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:22:51 Download gff for BS15210.complete
Subject Subject Range Query Range Percent Splice Strand
CG8664-RA 1..645 17..661 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:54:48 Download gff for BS15210.complete
Subject Subject Range Query Range Percent Splice Strand
CG8664-RA 12..666 9..667 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:34:26 Download gff for BS15210.complete
Subject Subject Range Query Range Percent Splice Strand
CG8664-RA 19..661 17..659 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:22:51 Download gff for BS15210.complete
Subject Subject Range Query Range Percent Splice Strand
CG8664-RA 12..666 9..667 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:04:00 Download gff for BS15210.complete
Subject Subject Range Query Range Percent Splice Strand
CG8664-RA 34..676 17..659 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:04:00 Download gff for BS15210.complete
Subject Subject Range Query Range Percent Splice Strand
X 17281813..17282389 83..659 100 <- Minus
X 17282628..17282693 17..82 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:34:26 Download gff for BS15210.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 17175846..17176422 83..659 100 <- Minus
arm_X 17176661..17176726 17..82 100   Minus

BS15210.pep Sequence

Translation from 16 to 660

> BS15210.pep
MKVLNVCLLVVASASFLLATANASAVGAFEDFEPYTDAELKDLYAAELMA
MEDEFMGVEQFGFIGSCRKILWAGYKGINGTKCIVEEVANVLLTCTNYVD
DLSTCTGDIPKDIQAMLNNVKQMIITSNKIINMKSELCASTSRSVVSSTK
SFMRCTLKAFYATMSLVRRMNTLIKQGAALPFNTSSCYVDATKKVVDGCN
AFVPNINTCIASMT*

BS15210.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:00:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG8664-PB 214 CG8664-PB 1..214 1..214 1092 100 Plus
CG8664-PA 214 CG8664-PA 1..214 1..214 1092 100 Plus
CG5107-PA 213 CG5107-PA 1..213 1..213 415 43 Plus
CG8661-PA 198 CG8661-PA 29..193 45..209 172 27.4 Plus