Clone Sequence Records
BS15210.3prime Sequence
674 bp (530 high quality bases) assembled on 2006-10-24
> BS15210.3prime
ATGGTCTANAAAGTAGGACGTCATGCTGGCTATGCAGGTATTGATGTTGG
GCACAAAGGCGTTGCAGCCGTCGACCGCCTTCTTGGTGGCATCGACGTAG
CAGGAAGAGGTGTTGAAGGGCAGGGCTGCGCCCTGCTTGATCAATGTGTT
CATGCGGCGGACAAGGGACATGGTGGCGTAGAAGGCCTTCAGGGTGCAAC
GCATGAAGCTCTTGGTGGAGGAGACGACGCTCCTGGAGGTGGAGGCGCAC
AGCTCGGACTTCATGTTGATGATCTTGTTGCTGGTGATGATCATTTGCTT
GACATTGTTCAGCATGGCCTGGATATCCTTGGGAATATCGCCGGTGCAGG
TGCTCAGGTCGTCTACGTAGTTGGTGCAGGTGAGCAGCACATTGGCCACC
TCCTCGACGATGCACTTGGTGCCGTTGATGCCCTTGTATCCGGCCCACAG
AATCTTGCGGCACGATCCAATGAAGCCGAACTGCTCGACGCCCATGAACT
CATCCTCCATTGCCATCAACTCGGCGGCGTAGAGATCCTTAAGCTCGGCA
TCGGTGTAGGGCTCGAAGTCCTCGAAAGCACCTACGGCACTGGCGTTCGC
TGTGGCCAGAAGGAAGCTGGCAGAGGCCACGACCAAGAGGCAGACGTTGA
GTACTTTCATGTCCACTGATAACT
BS15210.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:16:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8664-PA | 645 | CG8664-RA | 1..641 | 660..20 | 3180 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:56:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8664-RB | 1571 | CG8664-RB | 32..674 | 662..20 | 3200 | 99.8 | Minus |
CG8664-RA | 712 | CG8664-RA | 32..674 | 662..20 | 3200 | 99.8 | Minus |
CG5445-RG | 2047 | CG5445-RG | 132..200 | 594..662 | 345 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:56:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17281815..17282389 | 20..594 | 2860 | 99.8 | Plus |
X | 23542271 | X | 17282627..17282695 | 594..662 | 345 | 100 | Plus |
Blast to na_te.dros performed 2015-02-12 05:56:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6900 | 381..204 | 122 | 54.9 | Minus |
BS15210.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:19:56 Download gff for
BS15210.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8664-PA | 1..645 | 16..660 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:54:16 Download gff for
BS15210.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8664-PA | 1..645 | 16..660 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 06:30:27 Download gff for
BS15210.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8664-RA | 12..659 | 20..668 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:52:43 Download gff for
BS15210.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8664-RA | 27..674 | 20..668 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:52:43 Download gff for
BS15210.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17281815..17282389 | 20..594 | 99 | <- | Plus |
X | 17282628..17282700 | 595..668 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 06:30:27 Download gff for
BS15210.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17175848..17176422 | 20..594 | 99 | <- | Plus |
arm_X | 17176661..17176733 | 595..668 | 97 | | Plus |
BS15210.5prime Sequence
675 bp (675 high quality bases) assembled on 2006-10-24
> BS15210.5prime
GAAGTTATCAGTCGACATGAAAGTACTCAACGTCTGCCTCTTGGTCGTGG
CCTCTGCCAGCTTCCTTCTGGCCACAGCGAACGCCAGTGCCGTAGGTGCT
TTCGAGGACTTCGAGCCCTACACCGATGCCGAGCTTAAGGATCTCTACGC
CGCCGAGTTGATGGCAATGGAGGATGAGTTCATGGGCGTCGAGCAGTTCG
GCTTCATTGGATCGTGCCGCAAGATTCTGTGGGCCGGATACAAGGGCATC
AACGGCACCAAGTGCATCGTCGAGGAGGTGGCCAATGTGCTGCTCACCTG
CACCAACTACGTAGACGACCTGAGCACCTGCACCGGCGATATTCCCAAGG
ATATCCAGGCCATGCTGAACAATGTCAAGCAAATGATCATCACCAGCAAC
AAGATCATCAACATGAAGTCCGAGCTGTGCGCCTCCACCTCCAGGAGCGT
CGTCTCCTCCACCAAGAGCTTCATGCGTTGCACCCTGAAGGCCTTCTACG
CCACCATGTCCCTTGTCCGCCGCATGAACACATTGATCAAGCAGGGCGCA
GCCCTGCCCTTCAACACCTCTTCCTGCTACGTCGATGCCACCAAGAAGGT
GGTCGACGGCTGCAACGCCTTTGTGCCCAACATCAATACCTGCATAGCCA
GCATGACATAAAAGCTTTCTAGACC
BS15210.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:16:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8664-PA | 645 | CG8664-RA | 1..645 | 17..661 | 3225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:29:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8664-RB | 1571 | CG8664-RB | 32..678 | 15..661 | 3235 | 100 | Plus |
CG8664-RA | 712 | CG8664-RA | 32..678 | 15..661 | 3235 | 100 | Plus |
CG5445-RG | 2047 | CG5445-RG | 132..200 | 83..15 | 345 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:29:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17281811..17282389 | 661..83 | 2895 | 100 | Minus |
X | 23542271 | X | 17282627..17282695 | 83..15 | 345 | 100 | Minus |
Blast to na_te.dros performed 2015-02-11 03:29:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6900 | 296..473 | 122 | 54.9 | Plus |
BS15210.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:19:57 Download gff for
BS15210.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8664-PA | 1..645 | 17..661 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:54:19 Download gff for
BS15210.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8664-PA | 1..645 | 17..661 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 21:05:35 Download gff for
BS15210.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8664-RA | 12..666 | 9..667 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 06:05:53 Download gff for
BS15210.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8664-RA | 27..681 | 9..667 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 06:05:53 Download gff for
BS15210.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17281808..17282389 | 83..667 | 99 | <- | Minus |
X | 17282628..17282700 | 9..82 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 21:05:35 Download gff for
BS15210.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17175841..17176422 | 83..667 | 99 | <- | Minus |
arm_X | 17176661..17176733 | 9..82 | 97 | | Minus |
BS15210.complete Sequence
677 bp assembled on 2006-11-01
> BS15210.complete
GAAGTTATCAGTCGACATGAAAGTACTCAACGTCTGCCTCTTGGTCGTGG
CCTCTGCCAGCTTCCTTCTGGCCACAGCGAACGCCAGTGCCGTAGGTGCT
TTCGAGGACTTCGAGCCCTACACCGATGCCGAGCTTAAGGATCTCTACGC
CGCCGAGTTGATGGCAATGGAGGATGAGTTCATGGGCGTCGAGCAGTTCG
GCTTCATTGGATCGTGCCGCAAGATTCTGTGGGCCGGATACAAGGGCATC
AACGGCACCAAGTGCATCGTCGAGGAGGTGGCCAATGTGCTGCTCACCTG
CACCAACTACGTAGACGACCTGAGCACCTGCACCGGCGATATTCCCAAGG
ATATCCAGGCCATGCTGAACAATGTCAAGCAAATGATCATCACCAGCAAC
AAGATCATCAACATGAAGTCCGAGCTGTGCGCCTCCACCTCCAGGAGCGT
CGTCTCCTCCACCAAGAGCTTCATGCGTTGCACCCTGAAGGCCTTCTACG
CCACCATGTCCCTTGTCCGCCGCATGAACACATTGATCAAGCAGGGCGCA
GCCCTGCCCTTCAACACCTCTTCCTGCTACGTCGATGCCACCAAGAAGGT
GGTCGACGGCTGCAACGCCTTTGTGCCCAACATCAATACCTGCATAGCCA
GCATGACATAAAAGCTTTCTAGACCAT
BS15210.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:07:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8664-RB | 645 | CG8664-PB | 1..645 | 17..661 | 3225 | 100 | Plus |
CG8664-RA | 645 | CG8664-PA | 1..645 | 17..661 | 3225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:07:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8664-RB | 1571 | CG8664-RB | 32..678 | 15..661 | 3235 | 100 | Plus |
CG8664-RA | 712 | CG8664-RA | 32..678 | 15..661 | 3235 | 100 | Plus |
CG5445-RG | 2047 | CG5445-RG | 132..200 | 83..15 | 345 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:07:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17281811..17282389 | 661..83 | 2895 | 100 | Minus |
X | 23542271 | X | 17282627..17282695 | 83..15 | 345 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 14:07:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6900 | 296..473 | 122 | 54.9 | Plus |
BS15210.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:22:51 Download gff for
BS15210.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8664-RA | 1..645 | 17..661 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:54:48 Download gff for
BS15210.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8664-RA | 12..666 | 9..667 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:34:26 Download gff for
BS15210.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8664-RA | 19..661 | 17..659 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:22:51 Download gff for
BS15210.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8664-RA | 12..666 | 9..667 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:04:00 Download gff for
BS15210.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8664-RA | 34..676 | 17..659 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:04:00 Download gff for
BS15210.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17281813..17282389 | 83..659 | 100 | <- | Minus |
X | 17282628..17282693 | 17..82 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:34:26 Download gff for
BS15210.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17175846..17176422 | 83..659 | 100 | <- | Minus |
arm_X | 17176661..17176726 | 17..82 | 100 | | Minus |
BS15210.pep Sequence
Translation from 16 to 660
> BS15210.pep
MKVLNVCLLVVASASFLLATANASAVGAFEDFEPYTDAELKDLYAAELMA
MEDEFMGVEQFGFIGSCRKILWAGYKGINGTKCIVEEVANVLLTCTNYVD
DLSTCTGDIPKDIQAMLNNVKQMIITSNKIINMKSELCASTSRSVVSSTK
SFMRCTLKAFYATMSLVRRMNTLIKQGAALPFNTSSCYVDATKKVVDGCN
AFVPNINTCIASMT*
BS15210.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:00:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8664-PB | 214 | CG8664-PB | 1..214 | 1..214 | 1092 | 100 | Plus |
CG8664-PA | 214 | CG8664-PA | 1..214 | 1..214 | 1092 | 100 | Plus |
CG5107-PA | 213 | CG5107-PA | 1..213 | 1..213 | 415 | 43 | Plus |
CG8661-PA | 198 | CG8661-PA | 29..193 | 45..209 | 172 | 27.4 | Plus |