Clone BS15224 Report

Search the DGRC for BS15224

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:152
Well:24
Vector:pDNR-Dual
Associated Gene/TranscriptEig71Ec-RA
Protein status:BS15224.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15224.3prime Sequence

552 bp (552 high quality bases) assembled on 2006-10-24

> BS15224.3prime
ATGGTCTAGAAAGCTTTTATTCTTCGGTAGGTCGACGAGTCGTAGTTCTA
GTAGTTGGCGCACGACGACGTGTAGTTCTTCGAGTAGTTCTAGTTGTTGG
AGCACGACGACGTGTAGTTCTACGAGAAGATCTAGTAGTTGGAGCACGAC
GGGTAGTTGGGGTCCTACGAGTAGTTCGAGGTCGTCGGGTGTCGGGAATT
CGCCGGGTTGTCCTCCTTGAAGTTGGAGGGCGAGCGGTGACCCCACCATC
AATGCTGTTTCTCACATTTTTGCAGTTTATAACAGCACAACGCTCGAGTG
TCAATCGACAAGTAGCCAGAGACAATTCGCAACGAGAGACATTTCGCCAG
TTTCGAATGCCTGACTGGCGGCGGCAGTGATTATTAAATGTGGTCGAAAC
ATCATTTTGAACTCCCAATCTCCGTTCATTTCGACGGCAAGTTTCGTTTT
CTTGACGGCAAATTTCTTGTTCACGAGTTTGAGCCTGAACAGCCACGCAA
AGGCAGAGAATAGCAAAAATGAGAGTAATTTTCGACATGTCGACTGATAA
CT

BS15224.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:16:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG7608-PA 522 Eig71Ec-RA 1..522 538..17 2560 99.6 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:24:53
Subject Length Description Subject Range Query Range Score Percent Strand
Eig71Ec-RA 639 CG7608-RA 38..561 540..17 2590 99.6 Minus
Eig71Ec-RA 639 CG7608-RA 469..536 151..84 250 91.2 Minus
Eig71Ec-RA 639 CG7608-RA 427..494 109..42 250 91.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:24:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15651557..15651843 17..303 1405 99.3 Plus
3L 28110227 3L 15651922..15652138 304..520 1070 99.5 Plus
3L 28110227 3L 15651582..15651649 84..151 250 91.2 Plus
3L 28110227 3L 15651624..15651691 42..109 250 91.2 Plus
Blast to na_te.dros performed on 2015-02-12 10:24:52 has no hits.

BS15224.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:20:23 Download gff for BS15224.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7608-PA 1..522 17..538 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:54:53 Download gff for BS15224.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7608-PA 1..522 17..538 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:57:08 Download gff for BS15224.3prime
Subject Subject Range Query Range Percent Splice Strand
Eig71Ec-RA 27..563 12..549 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:01:23 Download gff for BS15224.3prime
Subject Subject Range Query Range Percent Splice Strand
Eig71Ec-RA 27..563 12..549 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:01:23 Download gff for BS15224.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 15651552..15651843 12..303 98 <- Plus
3L 15651922..15652131 304..513 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:57:08 Download gff for BS15224.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15644652..15644943 12..303 98 <- Plus
arm_3L 15645022..15645231 304..513 100 <- Plus

BS15224.5prime Sequence

552 bp (552 high quality bases) assembled on 2006-10-24

> BS15224.5prime
GAAGTTATCAGTCGACATGTCGAAAATTACTCTCATTTTTGCTATTCTCT
GCCTTTGCGTGGCTGTTCAGGCTCAAACTCGTGAACAAGAAATTTGCCGT
CAAGAAAACGAAACTTGCCGTCGAAATGAACGGAGATTGGGAGTTCAAAA
TGATGTTTCGACCACATTTAATAATCACTGCCGCCGCCAGTCAGGCATTC
GAAACTGGCGAAATGTCTCTCGTTGCGAATTGTCTCTGGCTACTTGTCGA
TTGACACTCGAGCGTTGTGCTGTTATAAACTGCAAAAATGTGAGAAACAG
CATTGATGGTGGGGTCACCGCTCGCCCTCCAACTTCAAGGAGGACAACCC
GGCGAATTCCCGACACCCGACGACCTCGAACTACTCGTAGGACCCCAACT
ACCCGTCGTGCTCCAACTACTAGATCTTCTCGTAGAACTACACGTCGTCG
TGCTCCAACAACTAGAACTACTCGAAGAACTACACGTCGTCGTGCGCCAA
CTACTAGAACTACGACTCGTCGACCTACTGAAGAATAAAAGCTTTCTAGA
CC

BS15224.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:16:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG7608-PA 522 Eig71Ec-RA 1..522 17..538 2585 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:39:37
Subject Length Description Subject Range Query Range Score Percent Strand
Eig71Ec-RA 639 CG7608-RA 38..561 15..538 2605 99.8 Plus
Eig71Ec-RA 639 CG7608-RA 427..494 446..513 250 91.2 Plus
Eig71Ec-RA 639 CG7608-RA 469..536 404..471 250 91.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:39:34
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15651557..15651843 538..252 1420 99.7 Minus
3L 28110227 3L 15651922..15652138 251..35 1070 99.5 Minus
3L 28110227 3L 15651582..15651649 471..404 250 91.2 Minus
3L 28110227 3L 15651624..15651691 513..446 250 91.2 Minus
Blast to na_te.dros performed on 2015-02-11 04:39:36 has no hits.

BS15224.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:20:24 Download gff for BS15224.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7608-PA 1..522 17..538 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:54:55 Download gff for BS15224.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7608-PA 1..522 17..538 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:38:26 Download gff for BS15224.5prime
Subject Subject Range Query Range Percent Splice Strand
Eig71Ec-RA 27..563 6..543 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:11:07 Download gff for BS15224.5prime
Subject Subject Range Query Range Percent Splice Strand
Eig71Ec-RA 27..563 6..543 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:11:07 Download gff for BS15224.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15651552..15651843 252..543 98 <- Minus
3L 15651922..15652131 42..251 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:38:26 Download gff for BS15224.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15644652..15644943 252..543 98 <- Minus
arm_3L 15645022..15645231 42..251 100 <- Minus

BS15224.complete Sequence

554 bp assembled on 2006-11-01

GenBank Submission: FJ637893

> BS15224.complete
GAAGTTATCAGTCGACATGTCGAAAATTACTCTCATTTTTGCTATTCTCT
GCCTTTGCGTGGCTGTTCAGGCTCAAACTCGTGAACAAGAAATTTGCCGT
CAAGAAAACGAAACTTGCCGTCGAAATGAACGGAGATTGGGAGTTCAAAA
TGATGTTTCGACCACATTTAATAATCACTGCCGCCGCCAGTCAGGCATTC
GAAACTGGCGAAATGTCTCTCGTTGCGAATTGTCTCTGGCTACTTGTCGA
TTGACACTCGAGCGTTGTGCTGTTATAAACTGCAAAAATGTGAGAAACAG
CATTGATGGTGGGGTCACCGCTCGCCCTCCAACTTCAAGGAGGACAACCC
GGCGAATTCCCGACACCCGACGACCTCGAACTACTCGTAGGACCCCAACT
ACCCGTCGTGCTCCAACTACTAGATCTTCTCGTAGAACTACACGTCGTCG
TGCTCCAACAACTAGAACTACTCGAAGAACTACACGTCGTCGTGCGCCAA
CTACTAGAACTACGACTCGTCGACCTACTGAAGAATAAAAGCTTTCTAGA
CCAT

BS15224.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:52:42
Subject Length Description Subject Range Query Range Score Percent Strand
Eig71Ec-RA 522 CG7608-PA 1..522 17..538 2595 99.8 Plus
Eig71Ec-RA 522 CG7608-PA 388..455 446..513 250 91.2 Plus
Eig71Ec-RA 522 CG7608-PA 430..497 404..471 250 91.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:52:44
Subject Length Description Subject Range Query Range Score Percent Strand
Eig71Ec-RA 639 CG7608-RA 38..561 15..538 2605 99.8 Plus
Eig71Ec-RA 639 CG7608-RA 427..494 446..513 250 91.2 Plus
Eig71Ec-RA 639 CG7608-RA 469..536 404..471 250 91.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:52:40
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15651557..15651843 538..252 1420 99.7 Minus
3L 28110227 3L 15651922..15652138 251..35 1070 99.5 Minus
3L 28110227 3L 15651582..15651649 471..404 250 91.2 Minus
3L 28110227 3L 15651624..15651691 513..446 250 91.2 Minus
Blast to na_te.dros performed on 2014-11-27 07:52:41 has no hits.

BS15224.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:21:01 Download gff for BS15224.complete
Subject Subject Range Query Range Percent Splice Strand
Eig71Ec-RA 1..522 17..538 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:52:47 Download gff for BS15224.complete
Subject Subject Range Query Range Percent Splice Strand
Eig71Ec-RA 24..560 6..543 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:27:14 Download gff for BS15224.complete
Subject Subject Range Query Range Percent Splice Strand
Eig71Ec-RA 40..553 17..530 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:21:01 Download gff for BS15224.complete
Subject Subject Range Query Range Percent Splice Strand
Eig71Ec-RA 24..560 6..543 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:06:30 Download gff for BS15224.complete
Subject Subject Range Query Range Percent Splice Strand
Eig71Ec-RA 40..553 17..530 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:06:30 Download gff for BS15224.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15651565..15651843 252..530 99 <- Minus
3L 15651922..15652131 42..251 100 <- Minus
3L 15652191..15652215 17..41 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:27:14 Download gff for BS15224.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15644665..15644943 252..530 99 <- Minus
arm_3L 15645022..15645231 42..251 100 <- Minus
arm_3L 15645291..15645315 17..41 100   Minus

BS15224.pep Sequence

Translation from 16 to 537

> BS15224.pep
MSKITLIFAILCLCVAVQAQTREQEICRQENETCRRNERRLGVQNDVSTT
FNNHCRRQSGIRNWRNVSRCELSLATCRLTLERCAVINCKNVRNSIDGGV
TARPPTSRRTTRRIPDTRRPRTTRRTPTTRRAPTTRSSRRTTRRRAPTTR
TTRRTTRRRAPTTRTTTRRPTEE*

BS15224.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:36:07
Subject Length Description Subject Range Query Range Score Percent Strand
Eig71Ec-PA 173 CG7608-PA 1..173 1..173 905 100 Plus
Eig71Eb-PB 95 CG7355-PB 1..93 1..96 241 51 Plus
Eig71Eb-PA 95 CG7355-PA 1..93 1..96 241 51 Plus
Eig71Ei-PB 102 CG7327-PB 1..95 1..92 170 41.2 Plus
Eig71Ei-PA 102 CG7327-PA 1..95 1..92 170 41.2 Plus