Clone BS15226 Report

Search the DGRC for BS15226

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:152
Well:26
Vector:pDNR-Dual
Associated Gene/TranscriptCG6041-RA
Protein status:BS15226.pep: full length peptide match
Sequenced Size:959

Clone Sequence Records

BS15226.complete Sequence

959 bp assembled on 2010-02-09

GenBank Submission: KX801359

> BS15226.complete
GAAGTTATCAGTCGACATGGCTAAAGTCTGGGCCATACTGGCCATAGCGC
TATTTCTAGGAGCACTGGCCTCCGGCGAAAGTCTTTCAAGCGAAACGGCT
GGAAAGATAGAGCCGAAGATCGTGGGCGGCTATGATGCGTCCATAGAACA
GGTATCGTACCAGGTGTCCATTCGCCTCACCGCCAACGACAAGAAGAGCT
ATGGATCTGGTCACCTATGCGGTGGGGTGGTCATTTCCCAACGTTTGGTG
GCCACCGCCGCCCACTGCTGTTACATCACCGACAAGAAGAAGTACCGAAC
TGCTGGCGAATTTGTCCTGGTCATGGGCAGCACCTACCTGACGAGCTCCA
CCGATCGCACTTTGATGTACTACCTGCAGCAGCTAATTACGCACGAGAAT
TATAATCCGGACGCGTTGACCAACGACATTGCCCTGATGTTCATCAATGG
ATATATACCCTGGAATTGGCCAACTGTAACGGCCCTGGCGTTGAACAGCC
AACTTGTGGCCACAAACACCGATTGCCTGATCTCCGGATGGGGTCTGCTC
CAGCAGAACGGAACATTTAGTAGTAATACTCTGCAGGCCGCGACGGTGCC
CATAGTGTCGTATACAACCTGTCGCATTTCATACAATTCGATTCCGGTTT
CCCAGGTGTGCGCCGGCTATTTGAGTGGCGGAGTGGACGCCTGCCAGGGC
GACTCCGGCGGACCCATGAGCTGCAACGGAATGTTGGCCGGAATCGTTTC
GTACGGCGCTGGATGCGCAGCACCTGGTTATCCGGGTGTCTACACAAATG
TGTCGTACTATTACGATTGGATTGTTCAAAAGAATAGCTCCCTCAACTAT
ACCATCTATCATAATGGAGGAGTGCGGCAGGGATCGAGTTGGTCCTACCT
GGGCATTCTTCCACTCCTTGTGGCCTTCCTCTTGGAACTCTGAAAGCTTT
CTAGACCAT

BS15226.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:27:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG6041-RA 927 CG6041-PA 1..927 17..943 4635 100 Plus
CG32755-RA 948 CG32755-PA 640..799 650..809 185 74.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:27:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG6041-RA 1109 CG6041-RA 90..1017 17..944 4640 100 Plus
CG32756-RB 2397 CG32756-RB 2293..2358 17..82 330 100 Plus
CG32755-RA 1347 CG32755-RA 765..924 650..809 185 74.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:27:24
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5949726..5950116 554..944 1955 100 Plus
X 23542271 X 5949351..5949630 277..556 1400 100 Plus
X 23542271 X 5949090..5949285 81..276 980 100 Plus
X 23542271 X 5948249..5948314 17..82 330 100 Plus
X 23542271 X 5951129..5951288 650..809 185 74.4 Plus
Blast to na_te.dros performed on 2014-11-28 04:27:25 has no hits.

BS15226.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:23 Download gff for BS15226.complete
Subject Subject Range Query Range Percent Splice Strand
CG6041-RA 60..985 17..942 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:39 Download gff for BS15226.complete
Subject Subject Range Query Range Percent Splice Strand
CG6041-RA 90..1015 17..942 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:24:48 Download gff for BS15226.complete
Subject Subject Range Query Range Percent Splice Strand
CG6041-RA 60..985 17..942 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:29:09 Download gff for BS15226.complete
Subject Subject Range Query Range Percent Splice Strand
CG6041-RA 90..1015 17..942 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:29:09 Download gff for BS15226.complete
Subject Subject Range Query Range Percent Splice Strand
X 5948249..5948312 17..80 100 -> Plus
X 5949090..5949285 81..276 100 -> Plus
X 5949351..5949630 277..556 100 -> Plus
X 5949729..5950114 557..942 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:39 Download gff for BS15226.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 5842282..5842345 17..80 100 -> Plus
arm_X 5843123..5843318 81..276 100 -> Plus
arm_X 5843384..5843663 277..556 100 -> Plus
arm_X 5843762..5844147 557..942 100   Plus

BS15226.3prime Sequence

827 bp (791 high quality bases) assembled on 2006-10-24

> BS15226.3prime
ATGGTCTAGAAAGCTTTCCCACTTTCCGGGAGGAAGGCCACAAGGAGTGG
AAGAATGCCCAGGTAGGACCAACTCGATCCCTGCCGCACTCCTCCACTAT
GAGAGATGGTATAGTTGAGGGAGCTATTCTTTTGAACAATCCAATCGTAA
TAGTACGACACATTTGTGTAGACACCCGGATAACCAGGTGCTGCGCATCC
AGCGCCGTACGAAACGATTCCGGCCAACATTCCGTTGCAGCTCATGGGTC
CGCCGGAGTCGCCCTGGCAGGCGTCCACTCCGCCACTCAAATAGCCGGCG
CACACCTGGGAAACCGGAATCGAATTGTATGAAATGCGACAGGTTGTATA
CGACACTATGGGCACCGTCGCGGCCTGCAGAGTATTACTACTAAATGTTC
CGTTCTGCTGGAGCAGACCCCATCCGGAGATCAGGCAATCGGTGTTTGTG
GCCACAAGTTGGCTGTTCAACGCCAGGGCCGTTACAGTTGGCCAATTCCA
GGGTATATATCCATTGATGAACATCAGGGCAATGTCGTTGGTCAACGCGT
CCGGATTATAATTCTCGTGCGTAATTAGCTGCTGCAGGTAGTACATCAAA
GTGCGATCGGTGGAGCTCGTCAGGTAGGTGCTGCCCATGACCAGGACAAA
TTCGCCAGCAGTTCGGTACTTCTTCTTGTCGGTGATGTAACAGCAGTGGG
CGGCGGTGGCCACCAAACGTTGGGAAATGACCACCCCACCGCATAGGTGA
CCAGATCCATAGCTCTTCTTGTCGTTGGCGGTGAGGCGAATGGACACCTG
GTACGATACCTGTTCTATGGACGCATC

BS15226.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:16:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG6041-PA 927 CG6041-RA 118..915 827..30 3940 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:29:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG6041-RA 1109 CG6041-RA 207..1004 827..30 3960 99.7 Minus
CG32755-RA 1347 CG32755-RA 765..924 311..152 185 75.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:29:29
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5949726..5950103 407..30 1860 99.5 Minus
X 23542271 X 5949351..5949630 684..405 1400 100 Minus
X 23542271 X 5949143..5949285 827..685 715 100 Minus
X 23542271 X 5951129..5951288 311..152 185 74.4 Minus
Blast to na_te.dros performed on 2015-02-13 15:29:31 has no hits.

BS15226.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:20:27 Download gff for BS15226.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6041-PA 118..921 24..827 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:54:58 Download gff for BS15226.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6041-PA 118..921 24..827 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:55:06 Download gff for BS15226.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6041-RA 207..1010 24..827 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:59:37 Download gff for BS15226.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6041-RA 207..1010 24..827 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:59:37 Download gff for BS15226.3prime
Subject Subject Range Query Range Percent Splice Strand
X 5949143..5949285 685..827 100 -> Minus
X 5949351..5949630 405..684 100 -> Minus
X 5949729..5950102 31..404 99 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:55:06 Download gff for BS15226.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 5843762..5844135 31..404 99 -> Minus
arm_X 5843176..5843318 685..827 100 -> Minus
arm_X 5843384..5843663 405..684 100 -> Minus

BS15226.5prime Sequence

868 bp (774 high quality bases) assembled on 2006-10-24

> BS15226.5prime
GAAGTTATCAGTCGACATGGCTAAAGTCTGGGCCATACTGGCCATAGCGC
TATTTCTAGGAGCACTGGCCTCCGGCGAAAGTCTTTCAAGCGAAACGGCT
GGAAAGATAGAGCCGAAGATCGTGGGCGGCTATGATGCGTCCATAGAACA
GGTATCGTACCAGGTGTCCATTCGCCTCACCGCCAACGACAAGAAGAGCT
ATGGATCTGGTCACCTATGCGGTGGGGTGGTCATTTCCCAACGTTTGGTG
GCCACCGCCGCCCACTGCTGTTACATCACCGACAAGAAGAAGTACCGAAC
TGCTGGCGAATTTGTCCTGGTCATGGGCAGCACCTACCTGACGAGCTCCA
CCGATCGCACTTTGATGTACTACCTGCAGCAGCTAATTACGCACGAGAAT
TATAATCCGGACGCGTTGACCAACGACATTGCCCTGATGTTCATCAATGG
ATATATACCCTGGAATTGGCCAACTGTAACGGCCCTGGCGTTGAACAGCC
AACTTGTGGCCACAAACACCGATTGCCTGATCTCCGGATGGGGTCTGCTC
CAGCAGAACGGAACATTTAGTAGTAATACTCTGCAGGCCGCGACGGTGCC
CATAGTGTCGTATACAACCTGTCGCATTTCATACAATTCGATTCCGGTTT
CCCAGGTGTGCGCCGGCTATTTGAGTGGCGGAGTGGACGCCTGCCAGGGC
GACTCCGGCGGACCCATGAGCTGCAACGGAATGTTGGCCGGAATCGTTTC
GTACGGCGCTGGATGCGCAGCACCTGGTTATCCGGGTGTCTACACAAATG
TGTCGTACTATTACGATTGGATTGTTCAAAAGAATAGCTCCCTCAACTAT
ACCATCTATCATAATGGA

BS15226.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:16:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG6041-PA 927 CG6041-RA 1..852 17..868 4260 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:55:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG6041-RA 1109 CG6041-RA 90..941 17..868 4260 100 Plus
CG32756-RB 2397 CG32756-RB 2293..2358 17..82 330 100 Plus
CG32755-RA 1347 CG32755-RA 765..924 650..809 185 75.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:55:03
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5949726..5950040 554..868 1575 100 Plus
X 23542271 X 5949351..5949630 277..556 1400 100 Plus
X 23542271 X 5949090..5949285 81..276 980 100 Plus
X 23542271 X 5948249..5948314 17..82 330 100 Plus
X 23542271 X 5951129..5951288 650..809 185 74.4 Plus
Blast to na_te.dros performed on 2015-02-12 05:55:06 has no hits.

BS15226.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:20:28 Download gff for BS15226.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6041-PA 1..851 17..867 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:55:00 Download gff for BS15226.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6041-PA 1..851 17..867 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 06:30:13 Download gff for BS15226.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6041-RA 74..940 2..867 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:49:53 Download gff for BS15226.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6041-RA 74..940 2..867 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:49:53 Download gff for BS15226.5prime
Subject Subject Range Query Range Percent Splice Strand
X 5948233..5948312 2..80 93 -> Plus
X 5949090..5949285 81..276 100 -> Plus
X 5949351..5949630 277..556 100 -> Plus
X 5949729..5950039 557..867 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 06:30:13 Download gff for BS15226.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 5842266..5842345 2..80 93 -> Plus
arm_X 5843123..5843318 81..276 100 -> Plus
arm_X 5843384..5843663 277..556 100 -> Plus
arm_X 5843762..5844072 557..867 100   Plus

BS15226.pep Sequence

Translation from 16 to 942

> BS15226.pep
MAKVWAILAIALFLGALASGESLSSETAGKIEPKIVGGYDASIEQVSYQV
SIRLTANDKKSYGSGHLCGGVVISQRLVATAAHCCYITDKKKYRTAGEFV
LVMGSTYLTSSTDRTLMYYLQQLITHENYNPDALTNDIALMFINGYIPWN
WPTVTALALNSQLVATNTDCLISGWGLLQQNGTFSSNTLQAATVPIVSYT
TCRISYNSIPVSQVCAGYLSGGVDACQGDSGGPMSCNGMLAGIVSYGAGC
AAPGYPGVYTNVSYYYDWIVQKNSSLNYTIYHNGGVRQGSSWSYLGILPL
LVAFLLEL*

BS15226.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:08:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG6041-PA 308 CG6041-PA 1..308 1..308 1618 100 Plus
CG32755-PA 315 CG32755-PA 1..315 1..308 663 45 Plus
CG14780-PA 302 CG14780-PA 30..270 32..269 467 38.1 Plus
etaTry-PA 262 CG12386-PA 8..260 7..275 451 39.7 Plus
CG6048-PA 362 CG6048-PA 7..286 7..271 426 36.2 Plus