Clone BS15232 Report

Search the DGRC for BS15232

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:152
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptCG31739-RA
Protein status:BS15232.pep: full length peptide match
Sequenced Size:3281

Clone Sequence Records

BS15232.complete Sequence

3281 bp assembled on 2009-12-07

GenBank Submission: KX806187

> BS15232.complete
GAAGTTATCAGTCGACATGAGTGGCAGATATCGCGGTGGAGGCGGCGGTC
GATTTGGTGGCCGTGGTGGCGGAGGCTATGCAGATGGTGGCGGCTACAAT
GACTTCGACAACTACCGTGGTGGCGGAGGACCAGGCTTCAATGACAACTT
TGGACCAGGTCCCGGACCAAATCCTTTCAACATGGGTGGTCCCAACATTT
CTGGCAATGAGTTAATGCAGCTGATGAGTGCCATGGCCAGCAACTTCAAT
ATGAATTCACAGCCCCCGCAGCCAATGCGCCAGAGTTGCGGCGAGTTGCG
CAATCACCATTGCGGATTATTTGTTGAGCTGTCCGGCAGGCTCATTAAGA
AGCGGGTGAATCGGTTTGCGGAGCTGCGCGACCGCAATGGCGGTGCATGC
CAGCTTGTGGTTCTGGAAGACAAGCATCCGCGAGTGGCACGGCGCATGAA
CAACATGCCAGAGAACACAACACTAACTATTGTGGGCCTGGTCATGCGGC
GACCACACAATTCGTGCAATCAAACAATGCCAACGGGCGAGATCGAAGTG
GAGGTGCAGGACATACTTAACATTCATTTCCCGGCAGGCGGTACCAAAAG
AGCTGGTGACAAGCGCACATACAGCACAATGGTGCAGCAGCAGAGTAATC
TTGGGATTACCAGCACCGAGTACAAGATAGCCAAGAACGAGAATATATTG
AAGTATTTTGAAAACCGTGATCTCACCTGCAACGATCTAAGGCGCGACGA
TGTCGGAAAGACAGTGACTTTGGTTGGTTGGATTCCCTCTACCAAAAACA
ACAAATTCTTGCAGCTCAAAGATGGTTATGGCCAAACGCAACTAATGATC
GAGGATCAGTCGCTTAGCGACACATTTCTTTCAACACCTGAGCAGACAGT
TATCCAAATAGTGGGCAAAGTTCTGGGGAGACCAAAAGCTAATGTTAATT
TGAAATATGATACTGGTGAGGTGGAAGTCAGTGTAACTAGCGTAAAAGTT
CTCAATCCGGACGATCCCTACGATGGTCCTATTAAGGCCAAAGAGAAGAA
ACAAAAGTTTTCCATTGATGATCTTGAGGCTGAGGAGGCTGCCGCCGAAG
CATCCGCCAATCTTACCAGCAATAATGGAGAATCCACGGAAGACAGCGCG
GAAGCAAGTACCACTGCTAATGCCTCTTTAATTGCCGAGCAACGAGCCAA
GGTGGCCGATACCAACAAGTTTGCCGACCGCACTCATAACTGCGGGGAAC
TAACCTCCAATGATATCAACGAAAAAGTAGTCATATGCGGCTGGTTGGAG
TTCCAGCGCATGAACAAATTCTTCATACTTCGGGATGCTTATGGACAAAC
TCAGGTACTGTTGTCACCGAAAACATATGGTTTGGAAGAATACGCAGAAA
CAGGCGTGCCCATTGAGTCAATTGTTCGAGTTGAGGGTACAGTGATTCCC
CGTCCAGCGGCTACAATAAACCCCAAAATGCAAACTGGACATGTTGAGGT
AGAAGCGGATAAAGTGGTTGTTCTCAATCCGGCAAAGAAAAATCTTCCGT
TTGAGATCCGAAAGTTTAATCGTGCTGGCGAACGCTTGCGGCTTACTCAT
CGGTATCTGGATCTACGATTTAATGATATGCAGCATAATCTGCGCCTTCG
ATCGGCTGTTATAATGAAAATGCGAGAGTATCTTATAAACTATCTGGGTT
TCGTCGAAGTGGAGACACCAACACTCTTCAGACGAACGCCAGGCGGAGCT
CAGGAGTTTGTAGTACCCACTCGCAAAGCGGGCCACTTTTATTCGCTCGT
ACAGAGTCCGCAGCAATTCAAGCAGATGCTGATGTCCGGTGGAATTGACA
GATACTTCCAGGTGGCCCGTTGCTACAGGGATGAAGCGACGCGTCCAGAT
CGTCAGCCGGAGTTCACCCAGTTGGATATTGAGCTATCATTTACCAGCAG
GGATGATATCATGCAACTGATTGAGGAGACTCTGCGTTATTCCTGGCCCA
AAGATTTTCCGCGTCTGCAAACACCGTTCCGTCGTATTACTTATGAGGAG
GCAATGGAAAAGTACGGAAATGACAAGCCGGACACTCGGTTTGGTTTTCT
GTTAAACAACGTGTCGGAAATCATCGAAAAGAGCGATGAATTCAAGGAAA
AATACGATGATCTTGGCGCTTATGCCATTGTAGTGCGAGCCAGTGAAGCC
TTTTGGAATGGAGCTGCCCGAAAGCATTACGAAAGCCTAGGCAAGGAGTT
CAAGGGTACGTTGTTCGTGCGCAAATTTGGCCCAACAAAGGATGTGCAGG
AGAAACTGGGAAAGCTACTAGGCGAAGATGTAGCTACAGAGGTCGCCGAT
AAGTTCGACCTTGAGGAGAACGATCTCCTTTTCTTGGGCATTGGATCAAA
AGTGGAAACTCGCGAATTGTTGGGTCGCATCCGACTGGACTATCAAGACT
TTCTGGTGGAAAATGCCAAAATAAAGAAGCCTAATGACTTCCGCTTCCTT
TGGGTGATCGATTTCCCGTTGTTCGAGCGAAATCGTGAGACTAATCAGTT
GGAGAGCGTTCACCACCCGTTTACCCTGCCACATAGTGATGATCTAGAAA
ATTTCGCCACTAGCTGCGAAAACTTGGAGAGCATACGCTCCCAGGCTTAC
GATTTGGTGCTGAACGGCCAGGAAGTCGGAGGCGGTTCAATTCGCATCCA
TGATCGAGACATGCAGCACTTTATATTGGAACAGATTCTGAAAATCCCGC
ATGATCATTTGTCGCACTTACTGAGCGCATTGGAGTCTGGATGCCCGCCT
CATGGAGGCATTGCTTTGGGCTTGGATCGCTTGATTGCCATTTTATGCCG
TGCGCGATCCATACGCGATGTGATTGCATTCCCCAAGTCACTCAATGGGC
GTGATCCCCTTTCAAACGCACCAGTTCCCATTTCCGATGAGGAGATGAGG
CTGTACCACCTTTCTGTGGTAGATGAGGAAGAGCCCAGCACAAATAACAC
GTCACACGAACAGGAGGACGACGATCCCGATCAAGAACGTGCTCCTCCAT
CCCCGATGTCGGCGACTAGCGAATCCGAGCAGCCGCAAATTAATGTAGAT
ATTAAGCAGGAGCCCGAAGGTCTGAATGAGGATTTTGCTCCTGAATCCCC
CGCAACCAAATCGACAGTAAAAGCTGATCCCGATGAACCCTCACCATCTA
ACCCCCTGGCATCGGAGGCTGCTACGCCGGCCAGAGCAAGAAGGACTGTT
AAAAAGAAGGTATAGAAGCTTTCTAGACCAT

BS15232.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:49:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG31739-RC 3249 CG31739-PC 1..3249 17..3265 16245 100 Plus
CG31739-RB 3249 CG31739-PB 1..3249 17..3265 16245 100 Plus
CG31739-RA 3249 CG31739-PA 1..3249 17..3265 16245 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:49:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG31739-RC 3865 CG31739-RC 289..3539 16..3266 16255 100 Plus
CG31739-RB 4153 CG31739-RB 189..3439 16..3266 16255 100 Plus
CG31739-RA 3899 CG31739-RA 323..3573 16..3266 16255 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:49:14
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16829002..16830460 952..2410 7295 100 Plus
2L 23513712 2L 16830524..16831379 2411..3266 4280 100 Plus
2L 23513712 2L 16828052..16828552 183..683 2505 100 Plus
2L 23513712 2L 16828617..16828795 684..862 895 100 Plus
2L 23513712 2L 16827723..16827889 16..182 835 100 Plus
2L 23513712 2L 16828856..16828946 862..952 455 100 Plus
Blast to na_te.dros performed on 2014-11-28 01:49:15 has no hits.

BS15232.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:41:46 Download gff for BS15232.complete
Subject Subject Range Query Range Percent Splice Strand
CG31739-RA 304..3552 17..3265 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:58:45 Download gff for BS15232.complete
Subject Subject Range Query Range Percent Splice Strand
CG31739-RA 324..3572 17..3265 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:19:56 Download gff for BS15232.complete
Subject Subject Range Query Range Percent Splice Strand
CG31739-RA 304..3552 17..3265 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:57:39 Download gff for BS15232.complete
Subject Subject Range Query Range Percent Splice Strand
CG31739-RA 324..3572 17..3265 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:57:39 Download gff for BS15232.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16827724..16827889 17..182 100 -> Plus
2L 16828052..16828552 183..683 100 -> Plus
2L 16828617..16828795 684..862 100 -> Plus
2L 16828857..16828946 863..952 100 -> Plus
2L 16829003..16830460 953..2410 100 -> Plus
2L 16830524..16831378 2411..3265 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:58:45 Download gff for BS15232.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16828617..16828795 684..862 100 -> Plus
arm_2L 16828857..16828946 863..952 100 -> Plus
arm_2L 16827724..16827889 17..182 100 -> Plus
arm_2L 16828052..16828552 183..683 100 -> Plus
arm_2L 16829003..16830460 953..2410 100 -> Plus
arm_2L 16830524..16831378 2411..3265 100   Plus

BS15232.3prime Sequence

873 bp (780 high quality bases) assembled on 2006-10-24

> BS15232.3prime
ATGGTCTAGAAAGCTTCTATACCTTCTTTTTAACAGTCCTTCTTGCTCTG
GCCGGCGTAGCAGCCTCCGATGCCAGGGGGTTAGATGGTGAGGGTTCATC
GGGATCAGCTTTTACTGTCGATTTGGTTGCGGGGGATTCAGGAGCAAAAT
CCTCATTCAGACCTTCGGGCTCCTGCTTAATATCTACATTAATTTGCGGC
TGCTCGGATTCGCTAGTCGCCGACATCGGGGATGGAGGAGCACGTTCTTG
ATCGGGATCGTCGTCCTCCTGTTCGTGTGACGTGTTATTTGTGCTGGGCT
CTTCCTCATCTACCACAGAAAGGTGGTACAGCCTCATCTCCTCATCGGAA
ATGGGAACTGGTGCGTTTGAAAGGGGATCACGCCCATTGAGTGACTTGGG
GAATGCAATCACATCGCGTATGGATCGCGCACGGCATAAAATGGCAATCA
AGCGATCCAAGCCCAAAGCAATGCCTCCATGAGGCGGGCATCCAGACTCC
AATGCGCTCAGTAAGTGCGACAAATGATCATGCGGGATTTTCAGAATCTG
TTCCAATATAAAGTGCTGCATGTCTCGATCATGGATGCGAATTGAACCGC
CTCCGACTTCCTGGCCGTTCAGCACCAAATCGTAAGCCTGGGAGCGTATG
CTCTCCAAGTTTTCGCAGCTAGTGGCGAAATTTTCTAGATCATCACTATG
TGGCAGGGTAAACGGGTGGTGAACGCTCTCCAACTGATTAGTCTCACGAT
TTCGCTCGAACAACGGGAAATCGATCACCCAAAGGAAGCGGAAGTCATTA
GGCTTCTTTATTTTGGCATTTTTCACCAGAAAGTCTTGATAGTCCAGTCG
GATGCGACCCAACAATTCGCGAG

BS15232.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:16:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG31739-PA 3249 CG31739-RA 2393..3249 873..17 4260 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:23:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG31739-RC 3865 CG31739-RC 2682..3539 873..16 4275 99.9 Minus
CG31739-RB 4153 CG31739-RB 2582..3439 873..16 4275 99.9 Minus
CG31739-RA 3899 CG31739-RA 2716..3573 873..16 4275 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:23:56
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16830524..16831379 871..16 4265 99.9 Minus
Blast to na_te.dros performed on 2015-02-12 10:23:58 has no hits.

BS15232.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:20:40 Download gff for BS15232.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31739-PA 2393..3249 17..873 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:55:17 Download gff for BS15232.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31739-PA 2393..3249 17..873 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:56:55 Download gff for BS15232.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31739-RA 2716..3575 13..873 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:59:30 Download gff for BS15232.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31739-RA 2716..3575 13..873 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:59:30 Download gff for BS15232.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 16830521..16831381 13..873 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:56:55 Download gff for BS15232.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16830521..16831381 13..873 99   Minus

BS15232.5prime Sequence

815 bp (753 high quality bases) assembled on 2006-10-24

> BS15232.5prime
GAAGTTATCAGTCGACATGAGTGGCAGATATCGCGGTGGAGGCGGCGGTC
GATTTGGTGGCCGTGGTGGCGGAGGCTATGCAGATGGTGGCGGCTACAAT
GACTTCGACAACTACCGTGGTGGCGGAGGACCAGGCTTCAATGACAACTT
TGGACCAGGTCCCGGACCAAATCCTTTCAACATGGGTGGTCCCAACATTT
CTGGCAATGAGTTAATGCAGCTGATGAGTGCCATGGCCAGCAACTTCAAT
ATGAATTCACAGCCCCCGCAGCCAATGCGCCAGAGTTGCGGCGAGTTGCG
CAATCACCATTGCGGATTATTTGTTGAGCTGTCCGGCAGGCTCATTAAGA
AGCGGGTGAATCGGTTTGCGGAGCTGCGCGACCGCAATGGCGGTGCATGC
CAGCTTGTGGTTCTGGAAGACAAGCATCCGCGAGTGGCACGGCGCATGAA
CAACATGCCAGAGAACACAACACTAACTATTGTGGGCCTGGTCATGCGGC
GACCACACAATTCGTGCAATCAAACAATGCCAACGGGCGAGATCGAAGTG
GAGGTGCAGGACATACTTAACATTCATTTCCCGGCAGGCGGTACCAAAAG
AGCTGGTGACAAGCGCACATACAGCACAATGGTGCAGCAGCAGAGTAATC
TTGGGATTACCAGCACCGAGTACAAGATAGCCAAGAACGAGAATATATTG
AAGTATTTTGAAAACCGTGATCTCACCTGCAACGATCTAAGGCGCGACGA
TGTCGGAAAGACAGTGACTTTGGTTGGTTGGATTCCCTCTACCAAAAACA
ACAAATTCTTGCAGC

BS15232.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:16:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG31739-PA 3249 CG31739-RA 1..799 17..815 3995 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:18:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG31739-RC 3865 CG31739-RC 289..1088 16..815 4000 100 Plus
CG31739-RB 4153 CG31739-RB 189..988 16..815 4000 100 Plus
CG31739-RA 3899 CG31739-RA 323..1122 16..815 4000 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:18:24
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16828052..16828552 183..683 2505 100 Plus
2L 23513712 2L 16827723..16827889 16..182 835 100 Plus
2L 23513712 2L 16828617..16828748 684..815 660 100 Plus
Blast to na_te.dros performed on 2015-02-10 22:18:28 has no hits.

BS15232.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:20:42 Download gff for BS15232.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31739-PA 1..799 17..815 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:55:18 Download gff for BS15232.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31739-PA 1..799 17..815 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 11:20:49 Download gff for BS15232.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31739-RA 317..1122 8..815 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:05:38 Download gff for BS15232.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31739-RA 317..1122 8..815 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:05:38 Download gff for BS15232.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 16827723..16827889 16..182 100 -> Plus
2L 16828052..16828552 183..683 100 -> Plus
2L 16828617..16828748 684..815 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 11:20:49 Download gff for BS15232.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16827723..16827889 16..182 100 -> Plus
arm_2L 16828052..16828552 183..683 100 -> Plus
arm_2L 16828617..16828748 684..815 100   Plus

BS15232.pep Sequence

Translation from 16 to 3264

> BS15232.pep
MSGRYRGGGGGRFGGRGGGGYADGGGYNDFDNYRGGGGPGFNDNFGPGPG
PNPFNMGGPNISGNELMQLMSAMASNFNMNSQPPQPMRQSCGELRNHHCG
LFVELSGRLIKKRVNRFAELRDRNGGACQLVVLEDKHPRVARRMNNMPEN
TTLTIVGLVMRRPHNSCNQTMPTGEIEVEVQDILNIHFPAGGTKRAGDKR
TYSTMVQQQSNLGITSTEYKIAKNENILKYFENRDLTCNDLRRDDVGKTV
TLVGWIPSTKNNKFLQLKDGYGQTQLMIEDQSLSDTFLSTPEQTVIQIVG
KVLGRPKANVNLKYDTGEVEVSVTSVKVLNPDDPYDGPIKAKEKKQKFSI
DDLEAEEAAAEASANLTSNNGESTEDSAEASTTANASLIAEQRAKVADTN
KFADRTHNCGELTSNDINEKVVICGWLEFQRMNKFFILRDAYGQTQVLLS
PKTYGLEEYAETGVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEADKV
VVLNPAKKNLPFEIRKFNRAGERLRLTHRYLDLRFNDMQHNLRLRSAVIM
KMREYLINYLGFVEVETPTLFRRTPGGAQEFVVPTRKAGHFYSLVQSPQQ
FKQMLMSGGIDRYFQVARCYRDEATRPDRQPEFTQLDIELSFTSRDDIMQ
LIEETLRYSWPKDFPRLQTPFRRITYEEAMEKYGNDKPDTRFGFLLNNVS
EIIEKSDEFKEKYDDLGAYAIVVRASEAFWNGAARKHYESLGKEFKGTLF
VRKFGPTKDVQEKLGKLLGEDVATEVADKFDLEENDLLFLGIGSKVETRE
LLGRIRLDYQDFLVENAKIKKPNDFRFLWVIDFPLFERNRETNQLESVHH
PFTLPHSDDLENFATSCENLESIRSQAYDLVLNGQEVGGGSIRIHDRDMQ
HFILEQILKIPHDHLSHLLSALESGCPPHGGIALGLDRLIAILCRARSIR
DVIAFPKSLNGRDPLSNAPVPISDEEMRLYHLSVVDEEEPSTNNTSHEQE
DDDPDQERAPPSPMSATSESEQPQINVDIKQEPEGLNEDFAPESPATKST
VKADPDEPSPSNPLASEAATPARARRTVKKKV*

BS15232.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:03:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG31739-PC 1082 CG31739-PC 1..1082 1..1082 5661 100 Plus
CG31739-PB 1082 CG31739-PB 1..1082 1..1082 5661 100 Plus
CG31739-PA 1082 CG31739-PA 1..1082 1..1082 5661 100 Plus
Aats-lys-PA 574 CG12141-PA 6..339 337..654 196 23.5 Plus
Aats-lys-PC 607 CG12141-PC 55..372 340..654 195 24.5 Plus