Clone Sequence Records
BS15247.3prime Sequence
624 bp (624 high quality bases) assembled on 2006-10-24
> BS15247.3prime
ATGGTCTAGAAAGCTTTCAGATGCTCACGTTGATGGCATTCTTGATCACA
ATGTTCCCGGCTCCGTGCCGTATCGTTAGATTGCTGTCGATCTCAATGCC
GCCGGACTTGCCTTGGCCAGCATCCGTTGGCGTTGGCTTGGCGTTTTTCG
ATCGAGAGCTGGGCCTTTTCTTGGCATCGCCGCTAAGATCCAGGGACTTG
ACCACCTTGAGCAGTCCATTGCAGCCCGTGTAGTCGACCACCTGCTGCGT
GGAGCTGCTGCCCAGGTAGATCCTACCGTCGTTACCCGTGTACTTGAGGG
CTCCGCTATTGTTCTGAATCTTGAGTCGGGTGCTATTGCCGATTACTTGC
AGTTGCCCGGAGTTGTTCACAATACGTATGCGGTTGCCATTGCCGATGAT
CCTGAGATCGCGCGTGTTGTTCTCAATGCGGTACTCCTTGCAGTTGCCCA
CCAGATCCTTGCTGGCGTAGATGGTTGTCTCCGGCGGCGTGGAACTTTTC
TTGCTCTTATTGGGGGATTTACCCTGCTCGTGCTCTTTCTGGCAAGTGGA
GCACTCGTCATCGTCATACGAATCGCTCGCCGAATCGGTTTCTATCACAC
GAACGCCCATGTCGACTGATAACT
BS15247.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:17:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15678-PA | 594 | CG15678-RA | 1..594 | 610..17 | 2870 | 99.3 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:31:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pirk-RB | 1846 | CG15678-RB | 896..1489 | 610..17 | 2910 | 99.3 | Minus |
| pirk-RA | 1301 | CG15678-RA | 351..944 | 610..17 | 2910 | 99.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:31:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21661324..21661917 | 17..610 | 2910 | 99.3 | Plus |
Blast to na_te.dros performed on 2015-02-11 03:31:34 has no hits.
BS15247.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:21:13 Download gff for
BS15247.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15678-PA | 1..594 | 17..610 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:56:00 Download gff for
BS15247.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15678-PA | 1..594 | 17..610 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 21:05:56 Download gff for
BS15247.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pirk-RA | 344..954 | 6..618 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:29:41 Download gff for
BS15247.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pirk-RA | 344..954 | 6..618 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:29:41 Download gff for
BS15247.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21661314..21661924 | 6..618 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 21:05:56 Download gff for
BS15247.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17548819..17549429 | 6..618 | 97 | | Plus |
BS15247.5prime Sequence
624 bp (624 high quality bases) assembled on 2006-10-24
> BS15247.5prime
GAAGTTATCAGTCGACATGGGCGTTCGTGTGATAGAAACCGATTCGGCGA
GCGATTCGTATGACGATGACGAGTGCTCCACTTGCCAGAAAGAGCACGAG
CAGGGTAAATCCCCCAATAAGAGCAAGAAAAGTTCCACGCCGCCGGAGAC
AACCATCTACGCCAGCAAGGATCTGGTGGGCAACTGCAAGGAGTACCGCA
TTGAGAACAACACGCGCGATCTCAGGATCATCGGCAATGGCAACCGCATA
CGTATTGTGAACAACTCCGGGCAACTGCAAGTAATCGGCAATAGCACCCG
ACTCAAGATTCAGAACAATAGCGGAGCCCTCAAGTACACGGGTAACGACG
GTAGGATCTACCTGGGCAGCAGCTCCACGCAGCAGGTGGTCGACTACACG
GGCTGCAATGGACTGCTCAAGGTGGTCAAGTCCCTGGATCTTAGCGGCGA
TGCCAAGAAAAGGCCCAGCTCTCGATCGAAAAACGCCAAGCCAACGCCAA
CGGATGCTGGCCAAGGCAAGTCCGGCGGCATTGAGATCGACAGCAATCTA
ACGATACGGCACGGAGCCGGGAACATTGTGATCAAGAATGCCATCAACGT
GAGCATCTGAAAGCTTTCTAGACC
BS15247.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:17:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15678-PA | 594 | CG15678-RA | 1..594 | 17..610 | 2870 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:39:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pirk-RB | 1846 | CG15678-RB | 896..1489 | 17..610 | 2910 | 99.3 | Plus |
| pirk-RA | 1301 | CG15678-RA | 351..944 | 17..610 | 2910 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:39:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21661324..21661917 | 610..17 | 2910 | 99.3 | Minus |
Blast to na_te.dros performed on 2015-02-11 04:39:42 has no hits.
BS15247.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:21:14 Download gff for
BS15247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15678-PA | 1..594 | 17..610 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:56:02 Download gff for
BS15247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15678-PA | 1..594 | 17..610 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:38:28 Download gff for
BS15247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pirk-RA | 344..954 | 9..621 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:11:32 Download gff for
BS15247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pirk-RA | 344..954 | 9..621 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:11:32 Download gff for
BS15247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21661314..21661924 | 9..621 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:38:28 Download gff for
BS15247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17548819..17549429 | 9..621 | 97 | | Minus |
BS15247.complete Sequence
626 bp assembled on 2006-11-01
GenBank Submission: FJ637901
> BS15247.complete
GAAGTTATCAGTCGACATGGGCGTTCGTGTGATAGAAACCGATTCGGCGA
GCGATTCGTATGACGATGACGAGTGCTCCACTTGCCAGAAAGAGCACGAG
CAGGGTAAATCCCCCAATAAGAGCAAGAAAAGTTCCACGCCGCCGGAGAC
AACCATCTACGCCAGCAAGGATCTGGTGGGCAACTGCAAGGAGTACCGCA
TTGAGAACAACACGCGCGATCTCAGGATCATCGGCAATGGCAACCGCATA
CGTATTGTGAACAACTCCGGGCAACTGCAAGTAATCGGCAATAGCACCCG
ACTCAAGATTCAGAACAATAGCGGAGCCCTCAAGTACACGGGTAACGACG
GTAGGATCTACCTGGGCAGCAGCTCCACGCAGCAGGTGGTCGACTACACG
GGCTGCAATGGACTGCTCAAGGTGGTCAAGTCCCTGGATCTTAGCGGCGA
TGCCAAGAAAAGGCCCAGCTCTCGATCGAAAAACGCCAAGCCAACGCCAA
CGGATGCTGGCCAAGGCAAGTCCGGCGGCATTGAGATCGACAGCAATCTA
ACGATACGGCACGGAGCCGGGAACATTGTGATCAAGAATGCCATCAACGT
GAGCATCTGAAAGCTTTCTAGACCAT
BS15247.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:40:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pirk-RB | 594 | CG15678-PB | 1..594 | 17..610 | 2910 | 99.3 | Plus |
| pirk-RA | 594 | CG15678-PA | 1..594 | 17..610 | 2910 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:40:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pirk-RB | 1846 | CG15678-RB | 896..1489 | 17..610 | 2910 | 99.3 | Plus |
| pirk-RA | 1301 | CG15678-RA | 351..944 | 17..610 | 2910 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:40:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21661324..21661917 | 610..17 | 2910 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:40:37 has no hits.
BS15247.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:33:09 Download gff for
BS15247.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15678-RA | 1..594 | 17..610 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:05:46 Download gff for
BS15247.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15678-RA | 321..931 | 9..621 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:49:11 Download gff for
BS15247.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pirk-RA | 351..943 | 17..609 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:33:09 Download gff for
BS15247.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15678-RA | 321..931 | 9..621 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:16:35 Download gff for
BS15247.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pirk-RA | 351..943 | 17..609 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:16:35 Download gff for
BS15247.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21661325..21661917 | 17..609 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:49:11 Download gff for
BS15247.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17548830..17549422 | 17..609 | 99 | | Minus |
BS15247.pep Sequence
Translation from 16 to 609
> BS15247.pep
MGVRVIETDSASDSYDDDECSTCQKEHEQGKSPNKSKKSSTPPETTIYAS
KDLVGNCKEYRIENNTRDLRIIGNGNRIRIVNNSGQLQVIGNSTRLKIQN
NSGALKYTGNDGRIYLGSSSTQQVVDYTGCNGLLKVVKSLDLSGDAKKRP
SSRSKNAKPTPTDAGQGKSGGIEIDSNLTIRHGAGNIVIKNAINVSI*
BS15247.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:30:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pirk-PB | 197 | CG15678-PB | 1..197 | 1..197 | 1012 | 100 | Plus |
| pirk-PA | 197 | CG15678-PA | 1..197 | 1..197 | 1012 | 100 | Plus |
