Clone Sequence Records
BS15259.complete Sequence
1367 bp assembled on 2009-12-07
GenBank Submission: KX805667
> BS15259.complete
GAAGTTATCAGTCGACATGATCGCAGCGCTCGGGCTGATCTTCGGCATTC
TAACGGCCTTGGTGGTCGTGGCACTTAAGCTACTGGGCCTGAAGCCGCCA
CTAATCTTCGGCAAGTACCCACTGAAAGGCATCTTTTACCGGGTGAAGTT
CTGGATCGCCCTGCTTGTCCTTCGCCGCCTGAGGTACCGCATCTACCGTC
GGAACGAGGAGCTGCTCGGCTCCGAGGAGCACCTGGCCAAGGTCGACAGG
CCGCAGCAGCTCAGCAACGACCCGAAGAGCTATGACGTGGTCAGCTTCAT
GGCGGCCAACAAGGAGGGCCAGAAACTAATGGTCACCTTGGAGCGAAGGA
GGCGCGGAGTCCTCAAGGCGGCACTGTACCTGTGGCTTCCCGAAAGCGGC
CTGTTCAGTTCGCCGAATCTGCCCGATATGGTATACTTCACCACCGCGGA
TGGAGCGGAGAGCAACGCGTTCCAGGGTGGAGGCTTCCACGTCTACCAGG
AGGCATCTATGCGTGTGTGGCGGCTCAAGTACTCCGGACTGCTGAAAACT
CAAGGGCCGGACGTGCAGGACGTAGCCGTGGACTTGGACCTCCGTTTCGA
AAGCTCCTCCGCTGAGCACTTCGACTACAACAGAGATCTGAGCAGCGCCC
TGATAGCCGACTCCATAGCCAGAGAGGCCTGGAACGAAAAGTTCTACAGC
CTGCTGCGCAGCGTCAACCACATCGTAGAGAAGCGCACCCACTACGAACA
GAACGGAGAACTGGCCGGCCAGGTCACGCTCGATGGCAAGGAGCTGGCGC
TGAAAATGGTGGGCTTCCGGGACCACAGCTTCGGCACCGAGCGCTGCCTA
AGCTCCATCAACCGGTACGTGTACTTTGCCCTCTTTATGGACGATGGCAG
CAGCATGGTGGTGGGCAGCCTCAGTCAGCCGTCCTTCTTCCTGTCCTCCC
TGAAGGTGGGCTACGTGTGCAGCCCCGAGCGGCAGTATCAGCCGCTGACC
GGGAGCAACTTCGAGCTGTACTCGTACGGCGAAAAGGGAACGCCGCCGCA
GCACCAGAATTTCATTGTGCGCACCGAGGAGCGGGAGTACCTCGTGCAAA
TCCAGGTGGAGGCCTCCGCGCTGCGCTACGTCGGCGGCGACTGGGAGTCT
AAGGTGTTCAACCAGTTTGTGGCCTGCACGGTCAACGGAGTTCCCGGCCA
GGGCCACGCCGAGTTCCTGTACCGCCACAAGGGCGGCAGGCCGGAGGATA
TATCGTCCGGGGACCCCGGCTGGTACCAGGACATCAAGCGCTTCGAGAGA
AGCCTCTCGTTGCTGGAAGAGGAGGGCCAGGACGAAGACTTCATCTTCTA
GAAGCTTTCTAGACCAT
BS15259.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:51:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3706-RA | 1335 | CG3706-PA | 1..1335 | 17..1351 | 6675 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:51:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3706-RA | 1545 | CG3706-RA | 112..1448 | 15..1351 | 6685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:51:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 931028..932364 | 1351..15 | 6685 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:51:30 has no hits.
BS15259.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:42:17 Download gff for
BS15259.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-RA | 310..1644 | 17..1351 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:59:43 Download gff for
BS15259.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-RA | 114..1448 | 17..1351 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:15:16 Download gff for
BS15259.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-RA | 310..1644 | 17..1351 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:58:29 Download gff for
BS15259.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-RA | 114..1448 | 17..1351 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:58:29 Download gff for
BS15259.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 931028..932362 | 17..1351 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:59:43 Download gff for
BS15259.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 825061..826395 | 17..1351 | 100 | | Minus |
BS15259.3prime Sequence
873 bp (663 high quality bases) assembled on 2006-10-24
> BS15259.3prime
ATGGTCTAGAAAGCTTCTACCATATGAGGTCTTCGTCCTGGCCCTCCTCT
TCCAGCAACGAGAGGCTTCTCTCGAAGCGCTTGATGTCCTGGTACCAGCC
GGGGTCCCCGGACGATATATCCTCCGGCCTGCCGCCCTTGTGGCGGTACA
GGAACTCGGCGTGGCCCTGGCCGGGAACTCCGTTGACCGTGCAGGCCACA
AACTGGTTGAACACCTTAGACTCCCAGTCGCCGCCGACGTAGCGCAGCGC
GGAGGCCTCCACCTGGATTTGCACGAGGTACTCCCGCTCCTCGGTGCGCA
CAATGAAATTCTGGTGCTGCGGCGGCGTTCCCTTTTCGCCGTACGAGTAC
AGCTCGAAGTTGCTCCCGGTCAGCGGCTGATACTGCCGCTCGGGGCTGCA
CACGTAGCCCACCTTCAGGGAGGACAGGAAGAAGGACGGCTGACTGAGGC
TGCCCACCACCATGCTGCTGCCATCGTCCATAAAGAGGGCAAAGTACACG
TACCGGTTGATGGAGCTTAGGCAGCGCTCGGTGCCGAAGCTGTGGTCCCG
GAAGCCCACCATTTTCAGCGCCAGCTCCTTGCCATCGAGCGTGACCTGGC
CGGCCAGTTCTCCGTTCTGTTCGTAGTGGGTGCGCTTCTCTACGATGTGG
TTGACGCTGCGCAGCAAGCTGTAGAACTTTTCGTTCCAGGCCTCTCTGGC
TATGGAGTCGGCTATCAGGGCGCTGCTCAGATCTCTGTTGTAGTCGAAGT
GCTCAGCGGAGGAGCTTTCGAAACGGAAGTCCAAGTCCACGGCTACGTCC
TGCACGTCCGGCCCTTGAGTTTTCAGCAGCCCGGAGTACTTGAGCCGGCA
CACACGCATAGATGCCTCCTGGT
BS15259.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:17:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3706-PA | 1335 | CG3706-RA | 479..1323 | 873..29 | 4125 | 99.5 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:51:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3706-RA | 1545 | CG3706-RA | 592..1441 | 873..24 | 4175 | 99.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:51:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 931035..931884 | 24..873 | 4175 | 99.4 | Plus |
Blast to na_te.dros performed on 2015-02-13 00:51:47 has no hits.
BS15259.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:21:41 Download gff for
BS15259.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-PA | 479..1335 | 17..873 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:56:35 Download gff for
BS15259.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-PA | 479..1335 | 17..873 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:24:16 Download gff for
BS15259.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-RA | 592..1448 | 17..873 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:56:48 Download gff for
BS15259.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-RA | 592..1448 | 17..873 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:56:48 Download gff for
BS15259.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 931028..931884 | 17..873 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:24:16 Download gff for
BS15259.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 825061..825917 | 17..873 | 99 | | Plus |
BS15259.5prime Sequence
901 bp (800 high quality bases) assembled on 2006-10-24
> BS15259.5prime
GAAGTTATCAGTCGACATGATCGCAGCGCTCGGGCTGATCTTCGGCATTC
TAACGGCCTTGGTGGTCGTGGCACTTAAGCTACTGGGCCTGAAGCCGCCA
CTAATCTTCGGCAAGTACCCACTGAAAGGCATCTTTTACCGGGTGAAGTT
CTGGATCGCCCTGCTTGTCCTTCGCCGCCTGAGGTACCGCATCTACCGTC
GGAACGAGGAGCTGCTCGGCTCCGAGGAGCACCTGGCCAAGGTCGACAGG
CCGCAGCAGCTCAGCAACGACCCGAAGAGCTATGACGTGGTCAGCTTCAT
GGCGGCCAACAAGGAGGGCCAGAAACTAATGGTCACCTTGGAGCGAAGGA
GGCGCGGAGTCCTCAAGGCGGCACTGTACCTGTGGCTTCCCGAAAGCGGC
CTGTTCAGTTCGCCGAATCTGCCCGATATGGTATACTTCACCACCGCGGA
TGGAGCGGAGAGCAACGCGTTCCAGGGTGGAGGCTTCCACGTCTACCAGG
AGGCATCTATGCGTGTGTGGCGGCTCAAGTACTCCGGACTGCTGAAAACT
CAAGGGCCGGACGTGCAGGACGTAGCCGTGGACTTGGACCTCCGTTTCGA
AAGCTCCTCCGCTGAGCACTTCGACTACAACAGAGATCTGAGCAGCGCCC
TGATAGCCGACTCCATAGCCAGAGAGGCCTGGAACGAAAAGTTCTACAGC
CTGCTGCGCAGCGTCAACCACATCGTAGAGAAGCGCACCCACTACGAACA
GAACGGAGAACTGGCCGGCCAGGTCACGCTCGATGGCAAGGAGCTGGCGC
TGAAAATGGTGGGCTTCCGGGACCACAGCTTCGGCACCGAGCGCTGCCTA
AGCTCCATCAACCGGTACGTGTACTTTGCCCTCTTTATGGACGATGGCAG
C
BS15259.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:17:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3706-PA | 1335 | CG3706-RA | 1..885 | 17..901 | 4425 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:07:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3706-RA | 1545 | CG3706-RA | 112..998 | 15..901 | 4435 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:07:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 931478..932364 | 901..15 | 4435 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 07:07:33 has no hits.
BS15259.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:21:42 Download gff for
BS15259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-PA | 1..885 | 17..901 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:56:36 Download gff for
BS15259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-PA | 1..885 | 17..901 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 20:50:46 Download gff for
BS15259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-RA | 108..998 | 9..901 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:26:56 Download gff for
BS15259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-RA | 108..998 | 9..901 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:26:56 Download gff for
BS15259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 931478..932368 | 9..901 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 20:50:46 Download gff for
BS15259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 825511..826401 | 9..901 | 99 | | Minus |
BS15259.pep Sequence
Translation from 16 to 1350
> BS15259.pep
MIAALGLIFGILTALVVVALKLLGLKPPLIFGKYPLKGIFYRVKFWIALL
VLRRLRYRIYRRNEELLGSEEHLAKVDRPQQLSNDPKSYDVVSFMAANKE
GQKLMVTLERRRRGVLKAALYLWLPESGLFSSPNLPDMVYFTTADGAESN
AFQGGGFHVYQEASMRVWRLKYSGLLKTQGPDVQDVAVDLDLRFESSSAE
HFDYNRDLSSALIADSIAREAWNEKFYSLLRSVNHIVEKRTHYEQNGELA
GQVTLDGKELALKMVGFRDHSFGTERCLSSINRYVYFALFMDDGSSMVVG
SLSQPSFFLSSLKVGYVCSPERQYQPLTGSNFELYSYGEKGTPPQHQNFI
VRTEEREYLVQIQVEASALRYVGGDWESKVFNQFVACTVNGVPGQGHAEF
LYRHKGGRPEDISSGDPGWYQDIKRFERSLSLLEEEGQDEDFIF*
BS15259.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:05:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3706-PA | 444 | CG3706-PA | 1..444 | 1..444 | 2306 | 100 | Plus |
