Clone Sequence Records
BS15261.complete Sequence
1559 bp assembled on 2009-12-07
GenBank Submission: KX800346
> BS15261.complete
GAAGTTATCAGTCGACATGAGCCAAACGGAGGCTAGCAAGACACCCAAGA
TTCCGGACTCGGAGCCGGACGGATCGAAGGGCAAAGGGAAGCAACAGCTG
GAAACTTACCGGGTATATGTGGTCACCTGGAATGTGGGCAGTCGATTTCC
GGATAACATATCCCTCCGCCATCTGCTGGGACTGCAGGATGTGACGGTGG
ATAAGGACACGAAGGAGACTAATGCCCACTTGCCGGACATCTATGCGTTG
GGGCTCCAGGAGGTCAATGCCCAGCCGCAGCAACAGGTGTTGGGACTGTT
CAAGGAGGATCCGTGGACGCACAAGGCTAAGGAACTGCTACGCAACTACG
ACTATGTGGCCGTAAAGACCGAGCAGATGCAGGGGCTGCTGCTCAGCATG
TTCGTGAGGCGGCAGCACGTTGAGCACTTGCAGGACATCGAGGCGGAGTT
CACGAGGACCGGTTTCGGTGGCATTTGGGGCAACAAGGGCGCCGTCAGTG
TCAGGTTCACCCTTTACGGCTGCGGACTGGCCTTTGTGGTGGCCCATCTG
ACTGCCCATGACCATATGATGGACGAGCGCATCGAGGACTACAAGCAGAT
ACTGGAGAACCATCACTACCACGTCAAGCGGTATAGGGAGATCTACGATC
ACGACTATGTCTTCTGGTTTGGCGATCTGAACTTCCGACTGCAGGGCAGC
GATTCCTCGACGGAAGTGCGCGAGTTGGTACGCGATGAGTCCCAGCACGA
GGCCCTTATCCAGCGGGATCAATTGTATCAAGTTCGCGAGAAGTCGCAGC
TGGCCTTTCAGGTTCTGCAGGAGCGACTGCCCGCCTTTCCGCCCACCTTC
AAGTTCCGCGAGGGCACCTCCGAGTACGACCTGAAGCGGCGGCCAGCCTG
GACGGATCGGATAATGTACGCCGTGCAGCCACTGAACCGGCAGCCCGGCA
TGCAGCTATCCATTGAGCAATGCTCGTATAAGTCCCATCCCCTGTACACC
ATCAGTGATCACAAGCCGGTGACCAGTGACTTTACCATCAAGCTCTACCC
GAATGTACGGGCGCCCGGCGTGGTGTTCTCGCCTCTGTCGCTCTGGAAGA
TTGGGGACGAGAACACGGTGGAGTATCACAAGCAGGCAGAGTTCGACGAG
GGGTCCAACGACTGGATTGGCATCTTTCCGTCGGAGTACGCCAGTTTGGC
GGATTACGTAGCCTACGAGTATGTCAATCAGGCTGAGTCGCCCTCATCCT
CGGACTCCAATCACCAACCGGATCCGTTTGAGACGCCCTCGCATCATCGA
AGGGGTCGGCATCATCACAGGAATCGCCAGCGACAGCGTCGCCATCAGGA
GGCTAATGCCCAAGAGTTGGTGCGGCTAGATTTCGCCGACGATGTGGAAC
TGCGTCACGGCGAGCAATACCTGTTGATATATTTCCGCAGCACCGGAGTC
CGGGGCGTGACCAGTTTGGCCGGCGTCAGTGGTGTCTTTGTGGCGGAGAA
GCGGCACGGCTCGCCCCATCGGACGGAGTACCATGTTGACTAGAAGCTTT
CTAGACCAT
BS15261.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:07:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9784-RB | 1527 | CG9784-PB | 1..1527 | 17..1543 | 7635 | 100 | Plus |
| CG9784-RC | 1560 | CG9784-PC | 1..1527 | 17..1543 | 7635 | 100 | Plus |
| CG9784-RA | 1527 | CG9784-PA | 1..1527 | 17..1543 | 7635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:07:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9784-RB | 1967 | CG9784-RB | 251..1777 | 17..1543 | 7635 | 100 | Plus |
| CG9784-RC | 1971 | CG9784-RC | 255..1781 | 17..1543 | 7635 | 100 | Plus |
| CG9784-RA | 3361 | CG9784-RA | 255..1781 | 17..1543 | 7635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:07:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16596716..16598242 | 1543..17 | 7635 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:07:51 has no hits.
BS15261.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:45:57 Download gff for
BS15261.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9784-RA | 229..1755 | 17..1543 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:06:40 Download gff for
BS15261.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9784-RA | 255..1781 | 17..1543 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:01:33 Download gff for
BS15261.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9784-RA | 229..1755 | 17..1543 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:04:40 Download gff for
BS15261.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9784-RA | 255..1781 | 17..1543 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:04:40 Download gff for
BS15261.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16596716..16598242 | 17..1543 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:06:40 Download gff for
BS15261.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16490749..16492275 | 17..1543 | 100 | | Minus |
BS15261.3prime Sequence
810 bp (723 high quality bases) assembled on 2006-10-24
> BS15261.3prime
ATGGTCTAGAAAGCTTCTCCTTAAGATGGTACTCCGTCCGATGGGGCGAG
CCGTGCCGCTTCTCCGCCACAAAGACACCACTGACGCCGGCCAAACTGGT
CACGCCCCGGACTCCGGTGCTGCGGAAATATATCAACAGGTATTGCTCGC
CGTGACGCAGTTCCACATCGTCGGCGAAATCTAGCCGCACCAACTCTTGG
GCATTAGCCTCCTGATGGCGACGCTGTCGCTGGCGATTCCTGTGATGATG
CCGACCCCTTCGATGATGCGAGGGCGTCTCAAACGGATCCGGTTGGTGAT
TGGAGTCCGAGGATGAGGGCGACTCAGCCTGATTGACATACTCGTAGGCT
ACGTAATCCGCCAAACTGGCGTACTCCGACGGAAAGATGCCAATCCAGTC
GTTGGACCCCTCGTCGAACTCTGCCTGCTTGTGATACTCCACCGTGTTCT
CGTCCCCAATCTTCCAGAGCGACAGAGGCGAGAACACCACGCCGGGCGCC
CGTACATTCGGGTAGAGCTTGATGGTAAAGTCACTGGTCACCGGCTTGTG
ATCACTGATGGTGTACAGGGGATGGGACTTATACGAGCATTGCTCAATGG
ATAGCTGCATGCCGGGCTGCCGGTTCAGTGGCTGCACGGCGTACATTATC
CGATCCGTCCAGGCTGGCCGCCGCTTCAGGTCGTACTCGGAGGTGCCCTC
GCGGAACTTGAAGGTGGGCGGAAAGGCGGGCAGTCGCTCCTGCAGAACCT
GAAAGGCCAGCTGCGACTTCTCGCGAACTTGATACAATTGATCCCGCTGG
ATAAGGGCCT
BS15261.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:17:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9784-PA | 1527 | CG9784-RA | 734..1518 | 810..26 | 3925 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:22:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9784-RB | 1967 | CG9784-RB | 984..1768 | 810..26 | 3925 | 100 | Minus |
| CG9784-RC | 1971 | CG9784-RC | 988..1772 | 810..26 | 3925 | 100 | Minus |
| CG9784-RA | 3361 | CG9784-RA | 988..1772 | 810..26 | 3925 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:22:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16596725..16597509 | 26..810 | 3925 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 22:22:54 has no hits.
BS15261.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:21:45 Download gff for
BS15261.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9784-PA | 734..1527 | 17..810 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:56:41 Download gff for
BS15261.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9784-PA | 734..1527 | 17..810 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 11:21:29 Download gff for
BS15261.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9784-RA | 988..1781 | 17..810 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:06:25 Download gff for
BS15261.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9784-RA | 988..1781 | 17..810 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:06:25 Download gff for
BS15261.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16596716..16597509 | 17..810 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 11:21:29 Download gff for
BS15261.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16490749..16491542 | 17..810 | 99 | | Plus |
BS15261.5prime Sequence
842 bp (775 high quality bases) assembled on 2006-10-24
> BS15261.5prime
GAAGTTATCAGTCGACATGAGCCAAACGGAGGCTAGCAAGACACCCAAGA
TTCCGGACTCGGAGCCGGACGGATCGAAGGGCAAAGGGAAGCAACAGCTG
GAAACTTACCGGGTATATGTGGTCACCTGGAATGTGGGCAGTCGATTTCC
GGATAACATATCCCTCCGCCATCTGCTGGGACTGCAGGATGTGACGGTGG
ATAAGGACACGAAGGAGACTAATGCCCACTTGCCGGACATCTATGCGTTG
GGGCTCCAGGAGGTCAATGCCCAGCCGCAGCAACAGGTGTTGGGACTGTT
CAAGGAGGATCCGTGGACGCACAAGGCTAAGGAACTGCTACGCAACTACG
ACTATGTGGCCGTAAAGACCGAGCAGATGCAGGGGCTGCTGCTCAGCATG
TTCGTGAGGCGGCAGCACGTTGAGCACTTGCAGGACATCGAGGCGGAGTT
CACGAGGACCGGTTTCGGTGGCATTTGGGGCAACAAGGGCGCCGTCAGTG
TCAGGTTCACCCTTTACGGCTGCGGACTGGCCTTTGTGGTGGCCCATCTG
ACTGCCCATGACCATATGATGGACGAGCGCATCGAGGACTACAAGCAGAT
ACTGGAGAACCATCACTACCACGTCAAGCGGTATAGGGAGATCTACGATC
ACGACTATGTCTTCTGGTTTGGCGATCTGAACTTCCGACTGCAGGGCAGC
GATTCCTCGACGGAAGTGCGCGAGTTGGTACGCGATGAGTCCCAGCACGA
GGCCCTTATCCAGCGGGATCAATTGTATCAAGTTCGCGAGAAGTCGCAGC
TGGCCTTTCAGGTTCTGCAGGAGCGACTGCCCGCCTTTCCGC
BS15261.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:17:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9784-PA | 1527 | CG9784-RA | 1..826 | 17..842 | 4130 | 100 | Plus |
| CG6805-PA | 1074 | CG6805-RA | 546..587 | 646..687 | 135 | 92.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:51:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9784-RB | 1967 | CG9784-RB | 251..1076 | 17..842 | 4130 | 100 | Plus |
| CG9784-RC | 1971 | CG9784-RC | 255..1080 | 17..842 | 4130 | 100 | Plus |
| CG9784-RA | 3361 | CG9784-RA | 255..1080 | 17..842 | 4130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:51:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16597417..16598242 | 842..17 | 4130 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 05:51:58 has no hits.
BS15261.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:21:46 Download gff for
BS15261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9784-PA | 1..826 | 17..842 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:56:42 Download gff for
BS15261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9784-PA | 1..826 | 17..842 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:53:52 Download gff for
BS15261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9784-RA | 247..1080 | 9..842 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:54:26 Download gff for
BS15261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9784-RA | 247..1080 | 9..842 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:54:26 Download gff for
BS15261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16597417..16598250 | 9..842 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:53:52 Download gff for
BS15261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16491450..16492283 | 9..842 | 99 | | Minus |
BS15261.pep Sequence
Translation from 16 to 1542
> BS15261.pep
MSQTEASKTPKIPDSEPDGSKGKGKQQLETYRVYVVTWNVGSRFPDNISL
RHLLGLQDVTVDKDTKETNAHLPDIYALGLQEVNAQPQQQVLGLFKEDPW
THKAKELLRNYDYVAVKTEQMQGLLLSMFVRRQHVEHLQDIEAEFTRTGF
GGIWGNKGAVSVRFTLYGCGLAFVVAHLTAHDHMMDERIEDYKQILENHH
YHVKRYREIYDHDYVFWFGDLNFRLQGSDSSTEVRELVRDESQHEALIQR
DQLYQVREKSQLAFQVLQERLPAFPPTFKFREGTSEYDLKRRPAWTDRIM
YAVQPLNRQPGMQLSIEQCSYKSHPLYTISDHKPVTSDFTIKLYPNVRAP
GVVFSPLSLWKIGDENTVEYHKQAEFDEGSNDWIGIFPSEYASLADYVAY
EYVNQAESPSSSDSNHQPDPFETPSHHRRGRHHHRNRQRQRRHQEANAQE
LVRLDFADDVELRHGEQYLLIYFRSTGVRGVTSLAGVSGVFVAEKRHGSP
HRTEYHVD*
BS15261.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:05:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9784-PB | 508 | CG9784-PB | 1..508 | 1..508 | 2712 | 100 | Plus |
| CG9784-PC | 519 | CG9784-PC | 1..508 | 1..508 | 2712 | 100 | Plus |
| CG9784-PA | 508 | CG9784-PA | 1..508 | 1..508 | 2712 | 100 | Plus |
| CG6805-PB | 348 | CG6805-PB | 12..312 | 33..343 | 828 | 51.1 | Plus |
| CG6805-PA | 357 | CG6805-PA | 12..312 | 33..343 | 828 | 51.1 | Plus |
