Clone Sequence Records
BS15262.complete Sequence
1286 bp assembled on 2009-12-07
GenBank Submission: KX800972
> BS15262.complete
GAAGTTATCAGTCGACATGAAATTGCCGACGAATTCTCAACTTTGGCGGC
CTCTGCTGCTGCTGCGCCGCCAAAGGTCGCATGACGCAAAGGCGGTGGAG
GCCCCAATACACAGACCGGTTCCAACCAGTGCCCAGCTGGACGAACTGGA
GCGGAATGTGGTTGTGCGCCACCACAAGAACAACGTGCCACTGATACGCT
CTCTCATCCAGGAGTTGGATGCGGGAGACCAGCACAAGTTGAGGCAGCTG
CAGGCGGAACTGGAACAGCTGCCCAATGCCACGCATCCGCGCCTGCGAGA
CTACGGAGAGGAGCCGCGGGAACTGGCGCAGTATGTCCACCGGCAGTTGA
CGCCACAGTCCAGGCTCAAGGAGTTCTCTGAATTAGCCCGTGCTCTTAAC
CTCTACCGCATGGATCACTTGGGTAACTACACTGGCCACAAAAGCTACTA
CCTTACTGGCCAGCTGGCAACTTTGGAGCAGGCCATCATACAATATGCAC
TTCAGGCAGTCACCGAACACGGTTTTAAGCTGATCTCCGTGCCGGACATA
CTGCCTAAGGAGGTGATCGAATCTTGTGGCATGCGCACCGAGGGTGAACG
CACACAGGTCTACAAACTGGACACCGGCGAGTGCCTATCGGGCACTTCGG
AAATGGCCCTGGCTGGATTCTTTGCGAATAAACTACTGTCGGAGGACCAA
CTGCCACTGAAAGTGACCGCCGTGAGTCGATGCTATAGGGCTGAAACATC
GGGACTGCAGGAGGAGAAAGGCATTTATCGTGTACACCAGTTCAACAAGG
TGGAAATGTTTGCCATCTGCACCGAGGAGCAGTCGGAGGCCGAGCTGGAG
GAGTTTAAGAACATTGAGGTAGATCTTTTCCGTCGACTGGGCCTCAACTT
TCGGCTGCTGGACATGCCACCTTGCGAGCTGGGCGCTCCGGCGTACCAGA
AGTACGACATAGAAGCCTGGATGCCAGGCCGTCAGATGTGGGGCGAGATC
TCAAGTTGCAGCAATTGCACGGATTATCAGGCAAGGCGGCTGGGCATCAG
ATACCGGCGCTCCGCTGACGGACAGATCCTCCATGCCCACACCATCAACG
GAACTGCGACGGCTATTCCGCGTCTGCTGATTGCCTTGCTGGAATCTTAT
CAGAAGGAAGATGGCATCGAGATACCTGCCGTTCTGCGACCATTCATGGA
CAACCAGGAGCTGATCACGCGAAACAAACGGATACCGGAGACGAAGCTGG
TCAAATTCATCAAGGCCTAGAAGCTTTCTAGACCAT
BS15262.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:07:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-ser-RB | 1254 | CG4938-PB | 1..1254 | 17..1270 | 6255 | 99.9 | Plus |
| Aats-ser-RA | 1254 | CG4938-PA | 1..1254 | 17..1270 | 6255 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:07:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-ser-RB | 2552 | CG4938-RB | 170..1423 | 17..1270 | 6255 | 99.9 | Plus |
| Aats-ser-RA | 1479 | CG4938-RA | 170..1423 | 17..1270 | 6255 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:07:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15340836..15342089 | 17..1270 | 6255 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:07:46 has no hits.
BS15262.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:45:56 Download gff for
BS15262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-ser-RA | 152..1405 | 17..1270 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:06:38 Download gff for
BS15262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-ser-RA | 170..1423 | 17..1270 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:08:39 Download gff for
BS15262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-ser-RA | 152..1405 | 17..1270 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:04:38 Download gff for
BS15262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-ser-RA | 170..1423 | 17..1270 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:04:38 Download gff for
BS15262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15340836..15342089 | 17..1270 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:06:38 Download gff for
BS15262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11166558..11167811 | 17..1270 | 99 | | Plus |
BS15262.3prime Sequence
737 bp (699 high quality bases) assembled on 2006-10-24
> BS15262.3prime
TCCTTTTGGGGCCCCCGCCAAACGAATGGTCTAGAAAGCTTCTCCCTTTT
GAGGAATTTGACCAGCTTCGTCTCCGGTATCCGTTTGTTTCGCGTGATCA
GCTCCTGGTTGTCCATGAATGGTCGCAGAACGGCAGGTATCTCGATGCCA
TCTTCCTTCTGATAAGATTCCAGCAAGGCAATCAGCAGACGCGGAATAGC
CGTCGCAGTTCCGTTGATGGTGTGGGCATGGAGGATCTGTCCGTCAGCGG
AGCGCCGGTATCTGATGCCCAGCCGCCTTGCCTGATAATCCGTGCAATTG
CTGCAACTTGAGATCTCGCCCCACATCTGACGGCCTGGCATCCAGGCTTC
TATGTCGTACTTCTGGTACGCCGGAGCGCCCAGCTCGCAAGGTGGCATGT
CCAGCAGCCGAAAGTTGAGGCCCAGTCGACGGAAAAGATCTACCTCAATG
TTCTTAAACTCCTCCAGCTCGGCCTCCGACTGCTCCTCGGTGCAGATGGC
AAACATTTCCACCTTGTTGAACTGGTGTACACGATAAATGCCTTTCTCCT
CCTGCAGTCCCGATGTTTCAGCCCTATAGCATCGACTCACGGCGGTCACT
TTCAGTGGCAGTTGGTCCTCCGACAGTAGTTTATTCGCAAAGAATCCAGC
CAGGGCCATTTCCGAAGTGCCCGATAGGCACTCGCCGGTGTCCAGTTTGT
AGACCTGTGTGCGTTCACCCTCGGTGCGCATGCCACA
BS15262.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:17:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4938-PA | 1254 | Aats-ser-RA | 559..1242 | 737..54 | 3420 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:51:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-ser-RB | 2552 | CG4938-RB | 728..1416 | 737..49 | 3430 | 99.9 | Minus |
| Aats-ser-RA | 1479 | CG4938-RA | 728..1416 | 737..49 | 3430 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:51:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15341394..15342082 | 737..49 | 3430 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-13 12:51:26 has no hits.
BS15262.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:21:47 Download gff for
BS15262.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4938-PA | 560..1249 | 45..736 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:56:44 Download gff for
BS15262.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4938-PA | 560..1249 | 45..736 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:05:01 Download gff for
BS15262.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-ser-RA | 729..1418 | 45..736 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:34:00 Download gff for
BS15262.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-ser-RA | 729..1418 | 45..736 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:34:00 Download gff for
BS15262.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15341395..15342084 | 45..736 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:05:01 Download gff for
BS15262.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11167117..11167806 | 45..736 | 99 | | Minus |
BS15262.5prime Sequence
847 bp (741 high quality bases) assembled on 2006-10-24
> BS15262.5prime
GAAGTTATCAGTCGACATGAAATTGCCGACGAATTCTCAACTTTGGCGGC
CTCTGCTGCTGCTGCGCCGCCAAAGGTCGCATGACGCAAAGGCGGTGGAG
GCCCCAATACACAGACCGGTTCCAACCAGTGCCCAGCTGGACGAACTGGA
GCGGAATGTGGTTGTGCGCCACCACAAGAACAACGTGCCACTGATACGCT
CTCTCATCCAGGAGTTGGATGCGGGAGACCAGCACAAGTTGAGGCAGCTG
CAGGCGGAACTGGAACAGCTGCCCAATGCCACGCATCCGCGCCTGCGAGA
CTACGGAGAGGAGCCGCGGGAACTGGCGCAGTATGTCCACCGGCAGTTGA
CGCCACAGTCCAGGCTCAAGGAGTTCTCTGAATTAGCCCGTGCTCTTAAC
CTCTACCGCATGGATCACTTGGGTAACTACACTGGCCACAAAAGCTACTA
CCTTACTGGCCAGCTGGCAACTTTGGAGCAGGCCATCATACAATATGCAC
TTCAGGCAGTCACCGAACACGGTTTTAAGCTGATCTCCGTGCCGGACATA
CTGCCTAAGGAGGTGATCGAATCTTGTGGCATGCGCACCGAGGGTGAACG
CACACAGGTCTACAAACTGGACACCGGCGAGTGCCTATCGGGCACTTCGG
AAATGGCCCTGGCTGGATTCTTTGCGAATAAACTACTGTCGGAGGACCAA
CTGCCACTGAAAGTGACCGCCGTGAGTCGATGCTATAGGGCTGAAACATC
GGGACTGCAGGAGGAGAAAGGCATTTATCGTGTACACCAGTTCAACAAGG
TGGAAATGTTTGCCATCTGCACCGAGGAACAGTCGGAAGCCGAGCTG
BS15262.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:17:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4938-PA | 1254 | Aats-ser-RA | 1..831 | 17..847 | 4080 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:47:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-ser-RB | 2552 | CG4938-RB | 170..1000 | 17..847 | 4110 | 99.6 | Plus |
| Aats-ser-RA | 1479 | CG4938-RA | 170..1000 | 17..847 | 4110 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:47:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15340836..15341666 | 17..847 | 4110 | 99.6 | Plus |
Blast to na_te.dros performed on 2015-02-13 12:47:40 has no hits.
BS15262.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:21:48 Download gff for
BS15262.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4938-PA | 1..831 | 17..847 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:56:45 Download gff for
BS15262.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4938-PA | 1..831 | 17..847 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:04:38 Download gff for
BS15262.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-ser-RA | 170..1000 | 17..847 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:28:15 Download gff for
BS15262.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-ser-RA | 170..1000 | 17..847 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:28:15 Download gff for
BS15262.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15340836..15341666 | 17..847 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:04:38 Download gff for
BS15262.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11166558..11167388 | 17..847 | 99 | | Plus |
BS15262.pep Sequence
Translation from 16 to 1269
> BS15262.pep
MKLPTNSQLWRPLLLLRRQRSHDAKAVEAPIHRPVPTSAQLDELERNVVV
RHHKNNVPLIRSLIQELDAGDQHKLRQLQAELEQLPNATHPRLRDYGEEP
RELAQYVHRQLTPQSRLKEFSELARALNLYRMDHLGNYTGHKSYYLTGQL
ATLEQAIIQYALQAVTEHGFKLISVPDILPKEVIESCGMRTEGERTQVYK
LDTGECLSGTSEMALAGFFANKLLSEDQLPLKVTAVSRCYRAETSGLQEE
KGIYRVHQFNKVEMFAICTEEQSEAELEEFKNIEVDLFRRLGLNFRLLDM
PPCELGAPAYQKYDIEAWMPGRQMWGEISSCSNCTDYQARRLGIRYRRSA
DGQILHAHTINGTATAIPRLLIALLESYQKEDGIEIPAVLRPFMDNQELI
TRNKRIPETKLVKFIKA*
BS15262.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:05:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-ser-PB | 417 | CG4938-PB | 1..417 | 1..417 | 2159 | 100 | Plus |
| Aats-ser-PA | 417 | CG4938-PA | 1..417 | 1..417 | 2159 | 100 | Plus |
| CG17259-PB | 501 | CG17259-PB | 53..461 | 16..394 | 372 | 26.8 | Plus |
| CG17259-PA | 501 | CG17259-PA | 53..461 | 16..394 | 372 | 26.8 | Plus |
| Slimp-PA | 464 | CG31133-PA | 147..432 | 85..376 | 180 | 25 | Plus |
