Clone Sequence Records
BS15264.complete Sequence
1109 bp assembled on 2010-02-09
GenBank Submission: KX803136
> BS15264.complete
GAAGTTATCAGTCGACATGAATCTGGAATCTCTGTTCCGCGACTTCAATC
CCTGCAAGTTCATCGTCCACTGCAGCCTGTTCATCTTTGTCACGCTCTTC
GCCTTGCGCCTCGACAACTACATTGATTGGCCCTACTGGGCGATTTTCAC
ACCGCTATGGATATGGAAATGCACCGCCATCCTGGGCGCAATCGTAGGAG
CCATTGTGTGGTGTCGGTATCCGCATTATCGTCTCGAGGGCGATGCCTAC
ACGCAGTTCAAAGCGATGCTCATCTCACTGGCCCTGCACCTGATCCTGCT
GATGTTTGAGCTGCTGGCCTGCGATAAGCTGACCTCGGACCGTCACTTGT
GGGTGCTGGTCTTCATTCCGCTGATCTTCGGCTCGGTGGTTAGTGTGGGC
GCCTGTGTCTGGGCCGTCAAGCACGATCGCTCCTTCGAGCTGGAGCTCTT
CCTGGCGGTCAACGCGCTTCAGTTTGTTTCACTGCCGCTAAAGCTGGATC
GCTTTGTCTACTGGAACTGGGACGTAGTGTTTGTGCCCATGTGGATCGTC
ATATGCCTGAGCCTGGTCAGCGTATTGTATAACATCATCTTCTGTGGCAT
CATGATGCGTACGCCGGAGGTCTCGCTGCAGCAGAAGAAGGCGGCATTAA
ACGCAGCGGTGGGCAACATCTGCACGGTGCTCCCACTGCTCTGCTTTCAG
GTGGTCATCTGCGACAAGCTGGACGGCGAGCTTAAGTTCCCGTACATCGT
GGTCTTCTCACCGCTGCTCGTCTCTATTCTGGCGCTAATAGTTCTTAGCT
CCTCGGCAAAGGGCGGCAACATGTGGTGGTTCGGCATCCGCAAGTCTTTC
AGCCAGTTCCTGTTGTCCGCGATGCCGTTCCTGCAGGAGTACGGCAACAT
CAGCTATCACCCGGAAACCCACAGCAATGCTGCACAGTCCATGCCGCTGG
ACGCAGCGTCCTCCTCGACGAGCATGGCGGCCAGCGAGCAGCTGCACGAG
TTCCACAAGCACGACAAGAAGAGCAAGAAGGGGGCCAAGAATGACATTCT
CAAGCCGGTGGTTCCGTTCGTCAGCATCGATCTGCCGGACTAGAAGCTTT
CTAGACCAT
BS15264.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:27:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14194-RA | 1077 | CG14194-PA | 1..1077 | 17..1093 | 5385 | 100 | Plus |
CG14194-RB | 1005 | CG14194-PB | 109..1005 | 197..1093 | 4485 | 100 | Plus |
CG14194-RB | 1005 | CG14194-PB | 1..109 | 17..125 | 545 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:27:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14194-RA | 1940 | CG14194-RA | 276..1355 | 15..1094 | 5400 | 100 | Plus |
CG14194-RB | 1868 | CG14194-RB | 386..1283 | 197..1094 | 4490 | 100 | Plus |
CG14194-RB | 1868 | CG14194-RB | 276..386 | 15..125 | 555 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:27:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19194423..19195001 | 125..703 | 2895 | 100 | Plus |
X | 23542271 | X | 19195056..19195452 | 698..1094 | 1985 | 100 | Plus |
X | 23542271 | X | 19193947..19194018 | 54..125 | 360 | 100 | Plus |
X | 23542271 | X | 19193830..19193869 | 15..54 | 200 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:27:55 has no hits.
BS15264.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:26 Download gff for
BS15264.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14194-RA | 266..1342 | 17..1093 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:49 Download gff for
BS15264.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14194-RA | 278..1354 | 17..1093 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:23:36 Download gff for
BS15264.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14194-RA | 266..1342 | 17..1093 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:29:24 Download gff for
BS15264.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14194-RA | 278..1354 | 17..1093 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:29:24 Download gff for
BS15264.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19193832..19193869 | 17..54 | 100 | -> | Plus |
X | 19193948..19194018 | 55..125 | 100 | -> | Plus |
X | 19194424..19194998 | 126..700 | 100 | -> | Plus |
X | 19195059..19195451 | 701..1093 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:49 Download gff for
BS15264.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19087865..19087902 | 17..54 | 100 | -> | Plus |
arm_X | 19087981..19088051 | 55..125 | 100 | -> | Plus |
arm_X | 19088457..19089031 | 126..700 | 100 | -> | Plus |
arm_X | 19089092..19089484 | 701..1093 | 100 | | Plus |
BS15264.3prime Sequence
774 bp (653 high quality bases) assembled on 2006-10-24
> BS15264.3prime
ATGGTCTAGAAAGCTTCTACCCCGGCAGATCGATGCTGACGAACGGAACC
ACCGGCTTGAGAATGTCATTCTTGGCCCCCTTCTTGCTCTTCTTGTCGTG
CTTGTGGAACTCGTGCAGCTGCTCGCTGGCCGCCATGCTCGTCGAGGAGG
ACGCTGCGTCCAGCGGCATGGACTGTGCAGCATTGCTGTGGGTTTCCGGG
TGATAGCTGATGTTGCCGTACTCCTGCAGGAACGGCATCGCGGACAACAG
GAACTGGCTGAAAGACTTGCGGATGCCGAACCACCACATGTTGCCGCCCT
TTGCCGAGGAGCTAAGAACTATTAGCGCCAGAATAGAGACGAGCAGCGGT
GAGAAGACCACGATGTACGGGAACTTAAGCTCGCCGTCCAGCTTGTCGCA
GATGACCACCTGAAAGCAGAGCAGTGGGAGCACCGTGCAGATGTTGCCCA
CCGCTGCGTTTAATGCCGCCTTCTTCTGCTGCAGCGAGACCTCCGGCGTA
CGCATCATGATGCCACAGAAGATGATGTTATACAATACGCTGACCAGGCT
CAGGCATATGACGATCCACATGGGCACAAACACTACGTCCCAGTTCCAGT
AGACAAAGCGATCCAGCTTTAGCGGCAGTGAAACAAACTGAAGCGCGTTG
ACCGCCAGGAAGAGCTCCAGCTCGAAGGAGCGATCGTGCTTGACGGCCCA
GACACAGGCGCCCACACTAACCACCGAGCCGAAAATCAGCGGAATGAAGA
CCAGCACCCACCAGTGACGGTCCG
BS15264.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:17:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14194-PA | 1077 | CG14194-RA | 320..1072 | 774..22 | 3715 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:31:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14194-RB | 1868 | CG14194-RB | 525..1277 | 774..22 | 3735 | 99.7 | Minus |
CG14194-RA | 1940 | CG14194-RA | 597..1349 | 774..22 | 3735 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:31:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19195056..19195446 | 412..22 | 1955 | 100 | Minus |
X | 23542271 | X | 19194634..19195001 | 774..407 | 1810 | 99.5 | Minus |
Blast to na_te.dros performed on 2015-02-11 03:31:42 has no hits.
BS15264.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:21:50 Download gff for
BS15264.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14194-PA | 320..1077 | 17..774 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:56:48 Download gff for
BS15264.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14194-PA | 320..1077 | 17..774 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 21:05:57 Download gff for
BS15264.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14194-RA | 597..1355 | 16..774 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:30:31 Download gff for
BS15264.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14194-RA | 597..1355 | 16..774 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:30:31 Download gff for
BS15264.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19194634..19194998 | 410..774 | 99 | -> | Minus |
X | 19195059..19195452 | 16..409 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 21:05:57 Download gff for
BS15264.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19088667..19089031 | 410..774 | 99 | -> | Minus |
arm_X | 19089092..19089485 | 16..409 | 99 | | Minus |
BS15264.5prime Sequence
750 bp (747 high quality bases) assembled on 2006-10-24
> BS15264.5prime
GAAGTTATCAGTCGACATGAATCTGGAATCTCTGTTCCGCGACTTCAATC
CCTGCAAGTTCATCGTCCACTGCAGCCTGTTCATCTTTGTCACGCTCTTC
GCCTTGCGCCTCGACAACTACATTGATTGGCCCTACTGGGCGATTTTCAC
ACCGCTATGGATATGGAAATGCACCGCCATCCTGGGCGCAATCGTAGGAG
CCATTGTGTGGTGTCGGTATCCGCATTATCGTCTCGAGGGCGATGCCTAC
ACGCAGTTCAAAGCGATGCTCATCTCACTGGCCCTGCACCTGATCCTGCT
GATGTTTGAGCTGCTGGCCTGCGATAAGCTGACCTCGGACCGTCACTTGT
GGGTGCTGGTCTTCATTCCGCTGATCTTCGGCTCGGTGGTTAGTGTGGGC
GCCTGTGTCTGGGCCGTCAAGCACGATCGCTCCTTCGAGCTGGAGCTCTT
CCTGGCGGTCAACGCGCTTCAGTTTGTTTCACTGCCGCTAAAGCTGGATC
GCTTTGTCTACTGGAACTGGGACGTAGTGTTTGTGCCCATGTGGATCGTC
ATATGCCTGAGCCTGGTCAGCGTATTGTATAACATCATCTTCTGTGGCAT
CATGATGCGTACGCCGGAGGTCTCGCTGCAGCAGAAGAAGGCGGCATTAA
ACGCATCGGTGGGCAACATCTGCACGGTGCTCCCACTGCTCTGCTTTCAG
GTGGTCATCTGCGACAAGCTGGACGGCGAGCTTAAGTTCCCGTACATCGT
BS15264.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:17:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14194-PA | 1077 | CG14194-RA | 1..734 | 17..750 | 3645 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:53:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14194-RA | 1940 | CG14194-RA | 276..1011 | 15..750 | 3665 | 99.9 | Plus |
CG14194-RB | 1868 | CG14194-RB | 386..939 | 197..750 | 2755 | 99.8 | Plus |
CG14194-RB | 1868 | CG14194-RB | 276..386 | 15..125 | 555 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:53:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19194423..19195001 | 125..703 | 2880 | 99.8 | Plus |
X | 23542271 | X | 19193947..19194018 | 54..125 | 360 | 100 | Plus |
X | 23542271 | X | 19195056..19195108 | 698..750 | 265 | 100 | Plus |
X | 23542271 | X | 19193830..19193869 | 15..54 | 200 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 05:53:25 has no hits.
BS15264.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:21:51 Download gff for
BS15264.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14194-PA | 1..734 | 17..750 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:56:51 Download gff for
BS15264.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14194-PA | 1..734 | 17..750 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:54:01 Download gff for
BS15264.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14194-RA | 266..1011 | 4..750 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:55:10 Download gff for
BS15264.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14194-RA | 266..1011 | 4..750 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:55:10 Download gff for
BS15264.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19193820..19193869 | 4..54 | 92 | -> | Plus |
X | 19193948..19194018 | 55..125 | 100 | -> | Plus |
X | 19194424..19194998 | 126..700 | 99 | -> | Plus |
X | 19195059..19195108 | 701..750 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:54:01 Download gff for
BS15264.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19087853..19087902 | 4..54 | 92 | -> | Plus |
arm_X | 19087981..19088051 | 55..125 | 100 | -> | Plus |
arm_X | 19088457..19089031 | 126..700 | 99 | -> | Plus |
arm_X | 19089092..19089141 | 701..750 | 100 | | Plus |
BS15264.pep Sequence
Translation from 16 to 1092
> BS15264.pep
MNLESLFRDFNPCKFIVHCSLFIFVTLFALRLDNYIDWPYWAIFTPLWIW
KCTAILGAIVGAIVWCRYPHYRLEGDAYTQFKAMLISLALHLILLMFELL
ACDKLTSDRHLWVLVFIPLIFGSVVSVGACVWAVKHDRSFELELFLAVNA
LQFVSLPLKLDRFVYWNWDVVFVPMWIVICLSLVSVLYNIIFCGIMMRTP
EVSLQQKKAALNAAVGNICTVLPLLCFQVVICDKLDGELKFPYIVVFSPL
LVSILALIVLSSSAKGGNMWWFGIRKSFSQFLLSAMPFLQEYGNISYHPE
THSNAAQSMPLDAASSSTSMAASEQLHEFHKHDKKSKKGAKNDILKPVVP
FVSIDLPD*
BS15264.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:08:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14194-PA | 358 | CG14194-PA | 1..358 | 1..358 | 1893 | 100 | Plus |
CG14194-PB | 334 | CG14194-PB | 1..334 | 1..358 | 1711 | 93.3 | Plus |