Clone Sequence Records
BS15266.complete Sequence
2855 bp assembled on 2009-12-07
GenBank Submission: KX803834
> BS15266.complete
GAAGTTATCAGTCGACATGTTGACTGTGCTTAAATCCACCCCGAAGGAGA
ACCTGGCTGGGTTTTGGCCCCGATTGAGCGCATTAACTCATGCCAAAGAT
ATGGACGTCGCTCTGTTGCTGCTGCAATGCCAAGATCGTGTGCTGGCCGA
GCTGGAGGAATCGCCGGAGGTGGCCGAGCACAACCAGGGACTGGTTAACT
CCCTCATCAACATGCACTTTGAGGGACGCTGGCTGGTCGCCAAGGAGCAG
TTGCCCCTGCTGCTGGCGCAGAGCCTGCAACTGATTCAGAAGCTGGTGAC
CAGGCAGCCCGACTACGCCGCGCAAAGAGTCCCCGAACTGATGGGGCTAG
TCCAATGCTATCTGCAGTATGGAGCTGAAGGAGAAACCCACCTAAAGCCC
CGGAAGTTGCCGCCCGCACAACAGTCGGCTGCCTATGGGCAGGAGAAGGA
AGAGGAAGACCAGCTGCTGGCCCAGATGTCCCGCCCTTGTGGTCGCAAGA
ACAAAGTGCGCAAGATGCGTTCGCTTGCCAAACAGCGCAACCAGGCGGTC
AATGAACACCATGAGCCGAATCCGCGAGAGCGTCTGGTACTGATGGGTAA
CCAGGACTACGGCTGCTTAACTGGAGACTCGGGCGAGAACGGGCTGCCCT
CTGATTCGGATCAGCAGCAGACAGAAAACAAGCACCATCGGCACCAAGAG
GCCAAGGTGAGGATCTCCGCATTACATTTGCTCAGCACCCTGACCAACCA
ACTGCCGCGCCGCTCGTTTTATGGCTACTGGCACGTCCTGTTCCCTGACG
GAGACGCGGGTGGTACTCCCCACCTACTGCTCCTTGGTCTGAAAGACACA
AATTTCCGTTGTCGAGCTCTGGCCCTGCAGGTGGGAGCGCAGCTGTTGTA
CGGTTCAAAGGCATTCCTCAGCCAGGCATGCTCGCTCGGACCCAGCAACT
TTACGCCATTTGCCGTCAGCCTGGCCAGCTCTGTATTGACCGCTTATCGC
ATCTTGATCGCTATCCTCGAGAGAGAGTATACACCGCCTGTGCTGACCCA
GTGCCTCAAGTGCTTAGCCGTTTTGGTGCAAGCCACGCCCTTTCATCAGC
TGGAAATGGGATTTGTCTACGAGTTTGTGGGCCACGTGAAAAAACTGATA
AAGAGTAGTGACCCTCCGGTCGCCGTGTCCGCCTTACTGGTCATGGAAAT
GCTGGTGGGCACATCCAAGCTTACACCGGAGATTGCCAGCTCCATAGGAC
TGGCTCCAAGTCAGAGAAACCTTCAAATGGAACACGCGAGTACGGCGGAA
ACATACCAGGAGTTGTGCGACTCGGATGCGGAGATGGAACTCGAGGAGGG
GGATGAGCAGCAGCAGCCATCGCAGAACAATGTGGTGAATCCCGTCCACA
CAGTGTCCCCAACCATTCCGCGCAATTCATGGCTGCTAAGGCAGGTCCTC
CGCTGTCTGGAGGGCATGAGAATTCCATCCGCCGTGCGCTTGGAGTGTTT
CCAGGTGCTTCAGGCCATGGCCACACACATAGGCCTGCTGCGAGGACATC
AGGTGCGTTTGTCAAGGGTGATATCCGCTGGGCTGACTGATCCCGCTACA
GATGTAAAGCTGTACGCCGCACGCTGCTTGGATTCAGTTGGCTACCAGTT
GGGCAGACTGTTACCGGAACCGGCAGAACGGGAGCTGCAGATGTCGTTTT
GGCTTACCCTGCTGCCGGCCACCTATGAAGCCTACGATTCCGCCGGTTTC
TCCTTGAAGTGCGCGCTCTGCGACGCCCTGTCCAACATGGGTGCTATTAG
CTTTGAGAGACTACCGGATGGCCAGAGGACCGCCCTGTTGGCCTTCCTAA
GCGGTTGCGCCAGCGACGATCATGAGGAAACACTGGTCAGGGTAGCCGCT
TTGCGGGCTATGGCCGTCTACGTGCTGCATCCCTCGCTAAGGACGGATCT
TGGATTTGTGGAGAATGCAGCGGAGCTGACATTGCGTATCTTAGGTGATT
CCCAGCTCTTGGCTAGAATCAAGGCCGCATGGGCCCTGGGGAACATCAGT
GACGCACTGGTGGCCGGTATTCCCAACCAGACCGAACGAATTTCCGCCGA
ACTTTTAGAACGCCTCATCCAGGCAGCCACCAAGAGCTGTGCCGATAACG
ACAAGGTCAGGGCCAACGCGGTGCGTGCCCTGGGAAATCTCTTGCAGATC
TTGCAGGTCCAGCCCTTAGGAAACGGTGAACTGATGCAAGTGGCCATGTC
TAAGCTGCTAGACTGTGTAACATTGCCAGGCAACGCTAAGGTGAAGTGGA
ATGCATGCTATGTCATCGGAAACCTAGTGAAGCACAGGGCTTTCTTTGCC
AACAACCGCCTGGCTGGTATCTTATTTCCCACCCTGTGTCAGTTGGTGGT
GCAGCACGCTAACTTCAAGGTACGCACCAATGCAGCCGGAGTTCTGCTGC
AGGTCAAGCAGCGTGAGGACTTCAGTGCCCACTTTCCTCTGCTATGGCGT
TCGCTCCTGGACGCTCTGGTGCGCTCTAATGTATTGGAAAGCTTTGAAGA
GTACAACCACCGGGATGCACTTCAGCAACAGTTGTGCCTAGCCATTGCCC
ACCTACTGTTGCTGGCCAGGAGCTCGGATCTGCCGATGATGCGAGAGTCC
CTAGAGGAGGATCGCCTAGAGGAGGTGCAGGCCACGTGGCGGCGCGTCGC
ATTCCGCATTGTTCCTGAGCAGTCGGATCCGCTCTTCACCTGCAGTCCTC
TGCTGCAGCAGCGTCTCCAAGGGGATGTCAACAATCTGCAGCGCTGCGCC
TTGGCGTTCATCACTAGCACACTCCGCCTGGACCCATAGAAGCTTTCTAG
ACCAT
BS15266.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:59:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16989-RB | 2823 | CG16989-PB | 1..2823 | 17..2839 | 14100 | 100 | Plus |
| CG16989-RA | 2823 | CG16989-PA | 1..2823 | 17..2839 | 14100 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:59:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16989-RB | 3915 | CG16989-RB | 331..3157 | 17..2843 | 14120 | 100 | Plus |
| CG16989-RA | 3208 | CG16989-RA | 331..3157 | 17..2843 | 14120 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:59:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 793477..796303 | 17..2843 | 14120 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:59:50 has no hits.
BS15266.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:44:10 Download gff for
BS15266.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16989-RA | 315..3132 | 22..2839 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:03:13 Download gff for
BS15266.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16989-RA | 336..3153 | 22..2839 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:24:01 Download gff for
BS15266.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16989-RA | 315..3132 | 22..2839 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:01:32 Download gff for
BS15266.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16989-RA | 336..3153 | 22..2839 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:01:32 Download gff for
BS15266.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 793482..796299 | 22..2839 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:03:13 Download gff for
BS15266.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 687515..690332 | 22..2839 | 99 | | Plus |
BS15266.3prime Sequence
838 bp (737 high quality bases) assembled on 2006-10-24
> BS15266.3prime
ATGGTCTAGAAAGCTTCTCCGGGTCCAGGCGGAGTGTGCTAGTGATGAAC
GCCAAGGCGCAGCGCTGCAGATTGTTGACATCCCCTTGGAGACGCTGCTG
CAGCAGAGGACTGCAGGTGAAGAGCGGATCCGACTGCTCAGGAACAATGC
GGAATGCGACGCGCCGCCACGTGGCCTGCACCTCCTCTAGGCGATCCTCC
TCTAGGGACTCTCGCATCATCGGCAGATCCGAGCTCCTGGCCAGCAACAG
TAGGTGGGCAATGGCTAGGCACAACTGTTGCTGAAGTGCATCCCGGTGGT
TGTACTCTTCAAAGCTTTCCAATACATTAGAGCGCACCAGAGCGTCCAGG
AGCGAACGCCATAGCAGAGGAAAGTGGGCACTGAAGTCCTCACGCTGCTT
GACCTGCAGCAGAACTCCGGCTGCATTGGTGCGTACCTTGAAGTTAGCGT
GCTGCACCACCAACTGACACAGGGTGGGAAATAAGATACCAGCCAGGCGG
TTGTTGGCAAAGAAAGCCCTGTGCTTCACTAGGTTTCCGATGACATAGCA
TGCATTCCACTTCACCTTAGCGTTGCCTGGCAATGTTACACAGTCTAGCA
GCTTAGACATGGCCACTTGCATCAGTTCACCGTTTCCTAAGGGCTGGACC
TGCAAGATCTGCAAGAGATTTCCCAGGGCACGCACCGCGTTGGCCCTGAC
CTTGTCGTTATCGGCACAGCTCTTGGTGGCTGCCTGGATGAAGCGTTCTA
AAAGTTCGGCGGAAATTCGTTCGGTCTGGTTGGGAATACCGGCCACCAGT
GCGTCACTGATGTTCCCCAGGGCCCATGCGGCCTTGAT
BS15266.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:17:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16989-PA | 2823 | CG16989-RA | 2002..2819 | 838..21 | 4065 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:27:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16989-RB | 3915 | CG16989-RB | 2332..3157 | 838..13 | 4085 | 99.6 | Minus |
| CG16989-RA | 3208 | CG16989-RA | 2332..3157 | 838..13 | 4085 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:27:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 795478..796303 | 838..13 | 4085 | 99.6 | Minus |
Blast to na_te.dros performed on 2015-02-10 16:27:38 has no hits.
BS15266.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:21:54 Download gff for
BS15266.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16989-PA | 2002..2823 | 17..838 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:56:55 Download gff for
BS15266.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16989-PA | 2002..2823 | 17..838 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 02:40:16 Download gff for
BS15266.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16989-RA | 2332..3162 | 8..838 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:32:05 Download gff for
BS15266.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16989-RA | 2332..3162 | 8..838 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:32:05 Download gff for
BS15266.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 795478..796308 | 8..838 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 02:40:16 Download gff for
BS15266.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 689511..690341 | 8..838 | 99 | | Minus |
BS15266.5prime Sequence
854 bp (800 high quality bases) assembled on 2006-10-24
> BS15266.5prime
GAAGTTATCAGTCGACATGTTGACTGTGCTTAAATCCACCCCGAAGGAGA
ACCTGGCTGGGTTTTGGCCCCGATTGAGCGCATTAACTCATGCCAAAGAT
ATGGACGTCGCTCTGTTGCTGCTGCAATGCCAAGATCGTGTGCTGGCCGA
GCTGGAGGAATCGCCGGAGGTGGCCGAGCACAACCAGGGACTGGTTAACT
CCCTCATCAACATGCACTTTGAGGGACGCTGGCTGGTCGCCAAGGAGCAG
TTGCCCCTGCTGCTGGCGCAGAGCCTGCAACTGATTCAGAAGCTGGTGAC
CAGGCAGCCCGACTACGCCGCGCAAAGAGTCCCCGAACTGATGGGGCTAG
TCCAATGCTATCTGCAGTATGGAGCTGAAGGAGAAACCCACCTAAAGCCC
CGGAAGTTGCCGCCCGCACAACAGTCGGCTGCCTATGGGCAGGAGAAGGA
AGAGGAAGACCAGCTGCTGGCCCAGATGTCCCGCCCTTGTGGTCGCAAGA
ACAAAGTGCGCAAGATGCGTTCGCTTGCCAAACAGCGCAACCAGGCGGTC
AATGAACACCATGAGCCGAATCCGCGAGAGCGTCTGGTACTGATGGGTAA
CCAGGACTACGGCTGCTTAACTGGAGACTCGGGCGAGAACGGGCTGCCCT
CTGATTCGGATCAGCAGCAGACAGAAAACAAGCACCATCGGCACCAAGAG
GCCAAGGTGAGGATCTCCGCATTACATTTGCTCAGCACCCTGACCACCCA
ACTGCCGCGCCGCTCGTTTTATGGCTACTGGCACGTCCTGTTCCCTGACG
GAGACGCGGGTGGTACTCCCCACCTACTGCTCCTTGGTCTGAAAGACACA
AATT
BS15266.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:17:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16989-PA | 2823 | CG16989-RA | 1..838 | 17..854 | 4165 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:05:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16989-RB | 3915 | CG16989-RB | 331..1168 | 17..854 | 4175 | 99.9 | Plus |
| CG16989-RA | 3208 | CG16989-RA | 331..1168 | 17..854 | 4175 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:05:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 793477..794314 | 17..854 | 4175 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-12 16:05:28 has no hits.
BS15266.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:21:55 Download gff for
BS15266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16989-PA | 1..838 | 17..854 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:56:56 Download gff for
BS15266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16989-PA | 1..838 | 17..854 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:24:27 Download gff for
BS15266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16989-RA | 331..1168 | 17..854 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:40:45 Download gff for
BS15266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16989-RA | 331..1168 | 17..854 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:40:45 Download gff for
BS15266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 793477..794314 | 17..854 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:24:27 Download gff for
BS15266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 687510..688347 | 17..854 | 99 | | Plus |
BS15266.pep Sequence
Translation from 16 to 2838
> BS15266.pep
MLTVLKSTPKENLAGFWPRLSALTHAKDMDVALLLLQCQDRVLAELEESP
EVAEHNQGLVNSLINMHFEGRWLVAKEQLPLLLAQSLQLIQKLVTRQPDY
AAQRVPELMGLVQCYLQYGAEGETHLKPRKLPPAQQSAAYGQEKEEEDQL
LAQMSRPCGRKNKVRKMRSLAKQRNQAVNEHHEPNPRERLVLMGNQDYGC
LTGDSGENGLPSDSDQQQTENKHHRHQEAKVRISALHLLSTLTNQLPRRS
FYGYWHVLFPDGDAGGTPHLLLLGLKDTNFRCRALALQVGAQLLYGSKAF
LSQACSLGPSNFTPFAVSLASSVLTAYRILIAILEREYTPPVLTQCLKCL
AVLVQATPFHQLEMGFVYEFVGHVKKLIKSSDPPVAVSALLVMEMLVGTS
KLTPEIASSIGLAPSQRNLQMEHASTAETYQELCDSDAEMELEEGDEQQQ
PSQNNVVNPVHTVSPTIPRNSWLLRQVLRCLEGMRIPSAVRLECFQVLQA
MATHIGLLRGHQVRLSRVISAGLTDPATDVKLYAARCLDSVGYQLGRLLP
EPAERELQMSFWLTLLPATYEAYDSAGFSLKCALCDALSNMGAISFERLP
DGQRTALLAFLSGCASDDHEETLVRVAALRAMAVYVLHPSLRTDLGFVEN
AAELTLRILGDSQLLARIKAAWALGNISDALVAGIPNQTERISAELLERL
IQAATKSCADNDKVRANAVRALGNLLQILQVQPLGNGELMQVAMSKLLDC
VTLPGNAKVKWNACYVIGNLVKHRAFFANNRLAGILFPTLCQLVVQHANF
KVRTNAAGVLLQVKQREDFSAHFPLLWRSLLDALVRSNVLESFEEYNHRD
ALQQQLCLAIAHLLLLARSSDLPMMRESLEEDRLEEVQATWRRVAFRIVP
EQSDPLFTCSPLLQQRLQGDVNNLQRCALAFITSTLRLDP*
BS15266.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:06:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16989-PB | 940 | CG16989-PB | 1..940 | 1..940 | 4807 | 100 | Plus |
| CG16989-PA | 940 | CG16989-PA | 1..940 | 1..940 | 4807 | 100 | Plus |
