Clone BS15286 Report

Search the DGRC for BS15286

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:152
Well:86
Vector:pDNR-Dual
Associated Gene/TranscriptCG33156-RA
Protein status:BS15286.pep: full length peptide match
Sequenced Size:1397

Clone Sequence Records

BS15286.complete Sequence

1397 bp assembled on 2009-12-07

GenBank Submission: KX806476

> BS15286.complete
GAAGTTATCAGTCGACATGCCAGCACCAGAGGACCTAAACTCCTCCGACC
AAGAGGAATATTTCTGCACCGAAAAGGACGCCGCTGCCGATGGAAGTCAT
CTGTTGCATGCCCCTGGAACGGTGGATGGAGCAACTGCATCCACCTCGGC
TCCGGGACTGGGCGGCAACCACATGACCAGCAGCTGGTGGTGGCGCACTC
GCAGCTTGAATGCACCCTCGCCTGTCCAGCAGTTCGGACCATGTGGTCGC
ATCATGAAAAACTCCGCCATGGTGATGCAGATCCAGGATCCGGCTAGTCA
ACGTCTCACCTGGTACAAGCCACCACTCACCGTGCTCGTGATCAAGAAGG
TCAGCGATGCCTCGGTGCTGGCACCGTTCGTCTACCTGGTGGACTGGCTG
CTGCAGGAGAAGAACATGGTCGTTTGGGTGGAGTCGGCCGTGCTGGAGGA
TGTCCAGCTCAACGAAAATGTGCGATTCAAGGCCATTCGGGATAAGCTAG
TGACTTTCAAAGATGGCCGAGATGATCTGACCGATCGCATAGACTTTATA
GTTTGCCTGGGTGGCGATGGCACCCTGCTGTATGCTTCGCTGCTCTTCCA
GCAATCTGTGCCCCCCGTCATGGCCTTCCATTTGGGCTCCCTCGGCTTTC
TCACACCCTTCCGTTTCGATAACTTTGAGGAGCAGCTGACCAGCGTCCTG
GAGGGTCACGCTGCCCTAACGCTTCGCAGTCGTTTGCGCTGTGTTATGCA
TCGCAGGAGCGATAGGAAACACGAGGCTAAGACTCTGGAGGCAGATCTAG
ATGGTGAGGCGCGACCTGCAGCCAACAGCATACTGGTGCTCAACGAAGTG
GTCATTGATCGTGGTCCATCGCCGTATCTGAGCAATATTGATCTGTTTCT
GGACGGAAAGTATATCACGTCGGTGCAGGGCGACGGTCTGATCGTATCGA
CGCCCACGGGAAGCACGGCATATGCGGCGGCGGCCGGTGCGTCCATGATC
CATCCCTCCGTGCCGGCGATTATGGTGACTCCCATCTGCCCGCATTCGCT
TAGCTTCCGACCCATTGTGGTGCCAGCAGGAGTGGAGCTGAAGATATCAG
TATCCCCCGAGAGCCGCAACACATCGTGGGTTAGCTTCGATGGACGCAAC
AGGCAGGAGCTCTTCCATGGCGACAGCCTTCGCGTGACCACCTCCATTTA
TCCCGTGCCATGCATCTGCGCCCAGGATCAGATATCCGACTGGTTCGCCT
CCCTAGCCGACGGACTGCACTGGAATGTGCGCAAGCGACAGAAGTGCCTG
GACGAGCTGTCGGATCTGACGGCATCCGGATCGGAGGATACGCTGGACGA
GATCGAGAACATGAAATTGTACGATGTGTAGAAGCTTTCTAGACCAT

BS15286.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:49:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG33156-RA 1365 CG33156-PA 1..1365 17..1381 6825 100 Plus
CG33156-RF 1353 CG33156-PF 164..1353 192..1381 5950 100 Plus
CG33156-RB 1362 CG33156-PB 173..1362 192..1381 5950 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:49:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG33156-RA 1874 CG33156-RA 147..1511 17..1381 6825 100 Plus
CG33156-RF 1795 CG33156-RF 243..1432 192..1381 5950 100 Plus
CG33156-RB 1824 CG33156-RB 272..1461 192..1381 5950 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:49:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13548954..13549536 1093..511 2915 100 Minus
2R 25286936 2R 13549599..13549917 510..192 1595 100 Minus
2R 25286936 2R 13548607..13548896 1381..1092 1450 100 Minus
2R 25286936 2R 13552107..13552283 193..17 885 100 Minus
2R 25286936 2R 13538198..13538468 1093..823 770 85.6 Minus
2R 25286936 2R 13538625..13538855 741..511 585 83.5 Minus
2R 25286936 2R 13539104..13539350 441..192 585 83.2 Minus
2R 25286936 2R 13537799..13538051 1344..1092 545 81 Minus
Blast to na_te.dros performed on 2014-11-28 01:49:20 has no hits.

BS15286.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:41:47 Download gff for BS15286.complete
Subject Subject Range Query Range Percent Splice Strand
CG33156-RA 124..1488 17..1381 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:58:47 Download gff for BS15286.complete
Subject Subject Range Query Range Percent Splice Strand
CG33156-RA 147..1511 17..1381 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:13:01 Download gff for BS15286.complete
Subject Subject Range Query Range Percent Splice Strand
CG33156-RA 124..1488 17..1381 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:57:41 Download gff for BS15286.complete
Subject Subject Range Query Range Percent Splice Strand
CG33156-RA 147..1511 17..1381 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:57:41 Download gff for BS15286.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13548607..13548894 1094..1381 100 <- Minus
2R 13548954..13549536 511..1093 100 <- Minus
2R 13549599..13549916 193..510 100 <- Minus
2R 13552108..13552283 17..192 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:58:47 Download gff for BS15286.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9436112..9436399 1094..1381 100 <- Minus
arm_2R 9436459..9437041 511..1093 100 <- Minus
arm_2R 9437104..9437421 193..510 100 <- Minus
arm_2R 9439613..9439788 17..192 100   Minus

BS15286.3prime Sequence

759 bp (733 high quality bases) assembled on 2006-10-24

> BS15286.3prime
ATGGTCTAGAAAGCTTCCACCTATCGTGCAATTTCATGTTCTCGATCTCG
TCCAGCGTATCCTCCGATCCGGATGCCGTCAGATCCGACAGCTCGCCCAG
GCACTTCTGTCGCTTGCGCACATTCCAGTGCAGTCCGTCGGCTAGGGAGG
CGAACCAGTCGGATATCTGATCCTGGGCGCAGATGCATGGCACGGGATAA
ATGGAGGTGGTCACGCGAAGGCTGTCGCCATGGAAGAGCTCCTGCCTGTT
GCGTCCATCGAAGCTAACCCACGATGTGTTGCGGCTCTCGGGGGATACTG
ATATCTTCAGCTCCACTCCTGCTGGCACCACAATGGGTCGGAAGCTAAGC
GAATGCGGGCAGATGGGAGTCACCATAATCGCCGGCACGGAGGGATGGAT
CATGGACGCACCGGCCGCCGCCGCATATGCCGTGCTTCCCGTGGGCGTCG
ATACGATCAGACCGTCGCCCTGCACCGACGTGATATACTTTCCGTCCAGA
AACAGATCAATATTGCTCAGATACGGCGATGGACCACGATCAATGACCAC
TTCGTTGAGCACCAGTATGCTGTTGGCTGCAGGTCGCGCCTCACCATCTA
GATCTGCCTCCAGAGTCTTAGCCTCGTGTTTCCTATCGCTCCTGCGATGC
ATAACACAGCGCAAACGACTGCGAAGCGTTAGGGCAGCGTGACCCTCCAG
GACGCTGGGCAGCTGCTCCTCAAAGTTATCGAAACGGAAGGGTGTGAAAA
AGCCCAGGG

BS15286.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:17:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG33156-PC 1128 CG33156-RC 391..1122 754..23 3560 99.4 Minus
CG33156-PA 1365 CG33156-RA 628..1359 754..23 3560 99.4 Minus
CG33156-PE 1473 CG33156-RE 736..1467 754..23 3560 99.4 Minus
CG33156-PB 1362 CG33156-RB 625..1356 754..23 3560 99.4 Minus
CG6145-PB 1263 CG6145-RB 799..981 481..299 465 90.1 Minus
CG6145-PA 1563 CG6145-RA 1099..1281 481..299 465 90.1 Minus
CG6145-PC 1647 CG6145-RC 1183..1365 481..299 465 90.1 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:30:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG33156-RF 1795 CG33156-RF 690..1426 759..23 3610 99.3 Minus
CG33156-RB 1824 CG33156-RB 719..1455 759..23 3610 99.3 Minus
CG33156-RE 2330 CG33156-RE 1225..1961 759..23 3610 99.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:30:51
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13548954..13549408 305..759 2230 99.3 Plus
2R 25286936 2R 13548613..13548896 23..306 1390 99.3 Plus
2R 25286936 2R 13538198..13538468 305..575 770 85.6 Plus
2R 25286936 2R 13537799..13538051 54..306 530 80.6 Plus
2R 25286936 2R 13538625..13538727 657..759 200 79.6 Plus
Blast to na_te.dros performed on 2015-02-11 03:30:55 has no hits.

BS15286.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:22:31 Download gff for BS15286.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33156-PB 620..1362 17..759 98   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:57:47 Download gff for BS15286.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33156-PA 623..1365 17..759 98   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 21:05:48 Download gff for BS15286.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33156-RE 1225..1964 18..759 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:27:49 Download gff for BS15286.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33156-RE 1225..1964 18..759 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:27:49 Download gff for BS15286.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 13548610..13548894 18..304 98 <- Plus
2R 13548954..13549408 305..759 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 21:05:48 Download gff for BS15286.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9436115..9436399 18..304 98 <- Plus
arm_2R 9436459..9436913 305..759 99   Plus

BS15286.5prime Sequence

800 bp (698 high quality bases) assembled on 2006-10-24

> BS15286.5prime
GAAGTTATCAGTCGACATGCCAGCACCAGAGGACCTAAACTCCTCCGACC
AAGAGGAATATTTCTGCACCGAAAAGGACGCCGCTGCCGATGGAAGTCAT
CTGTTGCATGCCCCTGGAACGGTGGATGGAGCAACTGCATCCACCTCGGC
TCCGGGACTGGGCGGCAACCACATGACCAGCAGCTGGTGGTGGCGCACTC
GCAGCTTGAATGCACCCTCGCCTGTCCAGCAGTTCGGACCATGTGGTCGC
ATCATGAAAAACTCCGCCATGGTGATGCAGATCCAGGATCCGGCTAGTCA
ACGTCTCACCTGGTACAAGCCACCACTCACCGTGCTCGTGATCAAGAAGG
TCAGCGATGCCTCGGTGCTGGCACCGTTCGTCTACCTGGTGGACTGGCTG
CTGCAGGAGAAGAACATGGTCGTTTGGGTGGAGTCGGCCGTGCTGGAGGA
TGTCCAGCTCAACGAAGATGTGCGATTCAAGGCCATTCGGGATAAGCTAG
TGACTTTCAAAGATGGCCGAGATGATCTGACCGATCGCATAGACTTTATA
GTTTGCCTGGGTGGCGATGGCACCCTGCTGTATGCTTCGCTGCTCTTCCA
GCAATCTGTGCCCCCCGTCATGGCCTTCCATTTGGGCTCCCTCGGCTTTC
TCACACCCTTCCGTTTCGATAACTTTGAGGAGCAGCTGACCAGCGTCCTG
GAGGGTCACGCTGCCCTAACGCTTCGCAGTCGTTTGCGCTGTGTTATGCA
TCGCAGGAGCGATAGGAAACACGAAGCTAAGACTCTGGAGGGAGATCTAG

BS15286.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:17:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG33156-PA 1365 CG33156-RA 1..784 17..800 3845 99.6 Plus
CG33156-PB 1362 CG33156-RB 173..781 192..800 2970 99.5 Plus
CG33156-PE 1473 CG33156-RE 285..892 193..800 2965 99.5 Plus
CG33156-PC 1128 CG33156-RC 1..547 254..800 2660 99.4 Plus
CG6145-PA 1563 CG6145-RA 272..392 225..345 330 90.9 Plus
CG6145-PC 1647 CG6145-RC 356..476 225..345 330 90.9 Plus
CG6145-PB 1263 CG6145-RB 1..92 254..345 260 91.3 Plus
CG6145-PA 1563 CG6145-RA 601..689 494..582 195 88.7 Plus
CG6145-PC 1647 CG6145-RC 685..773 494..582 195 88.7 Plus
CG6145-PB 1263 CG6145-RB 301..389 494..582 195 88.7 Plus
CG6145-PA 1563 CG6145-RA 430..485 386..441 155 91 Plus
CG6145-PC 1647 CG6145-RC 514..569 386..441 155 91 Plus
CG6145-PB 1263 CG6145-RB 130..185 386..441 155 91 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:55:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG33156-RA 1874 CG33156-RA 147..930 17..800 3875 99.6 Plus
CG33156-RF 1795 CG33156-RF 243..851 192..800 3000 99.5 Plus
CG33156-RB 1824 CG33156-RB 272..880 192..800 3000 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:55:42
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13549599..13549917 510..192 1580 99.7 Minus
2R 25286936 2R 13549247..13549536 800..511 1420 99.3 Minus
2R 25286936 2R 13552107..13552283 193..17 885 100 Minus
2R 25286936 2R 13538625..13538855 741..511 585 83.5 Minus
2R 25286936 2R 13539104..13539350 441..192 585 83.2 Minus
Blast to na_te.dros performed on 2015-02-12 05:55:46 has no hits.

BS15286.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:22:32 Download gff for BS15286.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33156-PA 1..784 17..800 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:57:49 Download gff for BS15286.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33156-PA 1..784 17..800 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 06:30:21 Download gff for BS15286.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33156-RA 137..930 6..800 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:51:28 Download gff for BS15286.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33156-RA 137..930 6..800 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:51:28 Download gff for BS15286.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 13549247..13549536 511..800 99 <- Minus
2R 13549599..13549916 193..510 99 <- Minus
2R 13552108..13552293 6..192 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 06:30:21 Download gff for BS15286.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9439613..9439798 6..192 97   Minus
arm_2R 9436752..9437041 511..800 99 <- Minus
arm_2R 9437104..9437421 193..510 99 <- Minus

BS15286.pep Sequence

Translation from 16 to 1380

> BS15286.pep
MPAPEDLNSSDQEEYFCTEKDAAADGSHLLHAPGTVDGATASTSAPGLGG
NHMTSSWWWRTRSLNAPSPVQQFGPCGRIMKNSAMVMQIQDPASQRLTWY
KPPLTVLVIKKVSDASVLAPFVYLVDWLLQEKNMVVWVESAVLEDVQLNE
NVRFKAIRDKLVTFKDGRDDLTDRIDFIVCLGGDGTLLYASLLFQQSVPP
VMAFHLGSLGFLTPFRFDNFEEQLTSVLEGHAALTLRSRLRCVMHRRSDR
KHEAKTLEADLDGEARPAANSILVLNEVVIDRGPSPYLSNIDLFLDGKYI
TSVQGDGLIVSTPTGSTAYAAAAGASMIHPSVPAIMVTPICPHSLSFRPI
VVPAGVELKISVSPESRNTSWVSFDGRNRQELFHGDSLRVTTSIYPVPCI
CAQDQISDWFASLADGLHWNVRKRQKCLDELSDLTASGSEDTLDEIENMK
LYDV*

BS15286.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:03:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG33156-PA 454 CG33156-PA 1..454 1..454 2371 100 Plus
CG33156-PE 490 CG33156-PE 73..490 37..454 2067 96.2 Plus
CG33156-PF 450 CG33156-PF 56..450 60..454 2041 100 Plus
CG33156-PB 453 CG33156-PB 59..453 60..454 2041 100 Plus
CG33156-PC 375 CG33156-PC 1..375 80..454 1933 100 Plus