Clone BS15291 Report

Search the DGRC for BS15291

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:152
Well:91
Vector:pDNR-Dual
Associated Gene/Transcripttwin-RC
Protein status:BS15291.pep: full length peptide match
Sequenced Size:1736

Clone Sequence Records

BS15291.complete Sequence

1736 bp assembled on 2009-12-07

GenBank Submission: KX804255

> BS15291.complete
GAAGTTATCAGTCGACATGTGTATCTTTAAAAAAAGAGACGCTTATCATC
AGGCGGTTATTATGAAAGGCAATCATTATAAAATGTCTCGTAACAAAGAC
AAATACGACAGCGCCAATCGGCGGCAGCAGATCTTTCTGTCGCAGGAGGA
CATAGCTGCGGGCAAGAAGACGAACTGGAGTGGCCTAGAGATTACTGGCT
GCGTCCGCAATATCAGCCCGTCGCTGTGGGAATTTGAGCATCTAACCGCC
CTCTACCTGAACGACAACCAGCTGCTGCGATTGCCCGCAGACGTTGGCAT
GCTGACCAGCCTCCGAACTTTGGACCTGTCCAGCAATAAGCTAAGAAGTC
TTCCCGCAGAGCTCGGCGAGCTCATCCAGTTGCGGGAGCTGTTGCTGAAC
AACAACTTTCTGCGCGTACTGCCTTACGAGATCGGCAAGCTGTTCCACCT
CGTCATACTCGGCCTCATGGGCAATCCGCTGCAAAAGGAGTTCATGAACA
TCTACAACGAACCGAACGGCACGCAGAAACTGCTCACCTACATGCTGGAC
AACTTGTCATTTACCGTGAATCCACCGCCCCAGAGGCCCTGGCTGCCACT
GGCCAAGCCCAACAAAACGCGACCAGCCTGCATTTTTACGGTCATGTGCT
ATAATGTGCTCTGCGACAAGTACGCGACGCGACAAATGTACGGATACTGT
CCGTCGTGGGCGCTATGCTGGGAGTACCGAAAAAAGTCGATTATCGACGA
GATACGGCACTATGCAGCGGACATTATCAGTCTGCAGGAGATCGAAACGG
AGCAATTCTATCACTTCTTCCTGCCGGAACTCAAGAACGATGGGTACGAG
GGAATCTTCTCACCGAAGTCGCGTGCTAAGACTATGTCCGAGCTGGAGAG
GAAGTACGTCGATGGCTGTGCGATATTCTTCAGGGCGTCCAAGTTTACGC
TGATCAAGGAATCATTGATCGAGTTCAATCAGCTGGCAATGGCCAATGCC
GAGGGCTCCGACAACATGCTGAACCGCGTAATGCCTAAGGATAACATCGG
TCTGGCCGCACTGCTCAAGGTGAAGGAGAACGCATGGGAGCCGATGTCCG
AGGTGACGCAGATCTCGCAGCCGCTGCTCGTCTGCACGGCGCACATACAC
TGGGACCCTGAGTTCTGCGACGTCAAGCTCATCCAGACGATGATGCTTAG
CAATGAGTTGAAGACGATCATCGACGAGGCGAGCCACAGTTTCCGACCTG
GTCACAAGAACGACTCCAATGCTGTCCAGCTGCTGCTGTGCGGTGACTTC
AACTCGCTACCCGATTCAGGCGTTGTGGAGTTTCTCGGCAAGGGCCGCGT
TTCCATGGATCATTTGGACTTCAAGGACATGGGCTACAAGTCCTGCCTGC
AGCGGCTGCTCTCGAACGACACCAACGAGTTTACGCACTCGTTCAAGCTA
GCCTCCGCCTACAACGAGGACATAATGCCGCACACCAACTATACGTTCGA
TTTTAAGGGCATCATCGACTACATTTTCTACACGAAGACGGGCATGGTGC
CGCTGGGCCTGCTGGGTCCTGTCTCCAATGATTGGCTGCGCGAGAATAAG
GTTGTTGGATGCCCACATCCGCATATACCCTCTGATCACTTCCCACTGCT
GGTCGAGCTAGAGCTGATGCATACGGCTAGCCAACAGGCGCCTCCTAACG
GGCTGATCAATCGCCGGTAGAAGCTTTCTAGACCAT

BS15291.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:39:39
Subject Length Description Subject Range Query Range Score Percent Strand
twin-RC 1704 CG31137-PC 1..1704 17..1720 8520 100 Plus
twin-RF 1659 CG31137-PF 1..1659 62..1720 8295 100 Plus
twin-RE 1659 CG31137-PE 1..1659 62..1720 8295 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:39:40
Subject Length Description Subject Range Query Range Score Percent Strand
twin-RC 2586 CG31137-RC 38..1741 17..1720 8520 100 Plus
twin-RE 3548 CG31137-RE 320..2005 35..1720 8430 100 Plus
twin-RF 2690 CG31137-RF 162..1845 37..1720 8420 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:39:36
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24198436..24199213 1720..943 3890 100 Minus
3R 32079331 3R 24199273..24199587 944..630 1575 100 Minus
3R 32079331 3R 24219964..24220157 385..192 955 99.5 Minus
3R 32079331 3R 24219600..24219776 560..384 885 100 Minus
3R 32079331 3R 24220214..24220345 198..67 660 100 Minus
3R 32079331 3R 24199882..24199951 630..561 350 100 Minus
Blast to na_te.dros performed on 2014-11-28 08:39:37 has no hits.

BS15291.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:25:50 Download gff for BS15291.complete
Subject Subject Range Query Range Percent Splice Strand
twin-RC 1..1704 17..1720 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:02:51 Download gff for BS15291.complete
Subject Subject Range Query Range Percent Splice Strand
twin-RC 38..1741 17..1720 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:16 Download gff for BS15291.complete
Subject Subject Range Query Range Percent Splice Strand
twin-RC 38..1741 17..1720 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:25:50 Download gff for BS15291.complete
Subject Subject Range Query Range Percent Splice Strand
twin-RC 38..1741 17..1720 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:22:27 Download gff for BS15291.complete
Subject Subject Range Query Range Percent Splice Strand
twin-RC 38..1741 17..1720 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:22:27 Download gff for BS15291.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24198436..24199213 943..1720 100 <- Minus
3R 24199275..24199587 630..942 100 <- Minus
3R 24199883..24199951 561..629 100 <- Minus
3R 24219600..24219775 385..560 100 <- Minus
3R 24219965..24220151 198..384 100 <- Minus
3R 24220215..24220343 69..197 100 <- Minus
3R 24220532..24220563 37..68 100 <- Minus
3R 24220828..24220847 17..36 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:16 Download gff for BS15291.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20024158..20024935 943..1720 100 <- Minus
arm_3R 20024997..20025309 630..942 100 <- Minus
arm_3R 20025605..20025673 561..629 100 <- Minus
arm_3R 20045322..20045497 385..560 100 <- Minus
arm_3R 20045687..20045873 198..384 100 <- Minus
arm_3R 20045937..20046065 69..197 100 <- Minus
arm_3R 20046254..20046285 37..68 100 <- Minus
arm_3R 20046550..20046569 17..36 100   Minus

BS15291.3prime Sequence

790 bp (724 high quality bases) assembled on 2006-10-24

> BS15291.3prime
ATGGTCTAGAAAGCTTCTCCCTGCGATTGATCAGCCCGTTAGGAGGCGCC
TGTTGGCTAGCCGTATGCATCAGCTCTAGCTCGACCAGCAGTGGGAAGTG
ATCAGAGGGTATATGCGGATGTGGGCATCCAACAACCTTATTCTCGCGCA
GCCAATCATTGGAGACAGGACCCAGCAGGCCCAGCGGCACCATGCCCGTC
TTCGTGTAGAAAATGTAGTCGATGATGCCCTTAAAATCGAACGTATAGTT
GGTGTGCGGCATTATGTCCTCGTTGTAGGCGGAGGCTAGCTTGAACGAGT
GCGTAAACTCGTTGGTGTCGTTCGAGAGCAGCCGCTGCAGGCAGGACTTG
TAGCCCATGTCCTTGAAGTCCAAATGATCCATGGAAACGCGGCCCTTGCC
GAGAAACTCCACAACGCCTGAATCGGGTAGCGAGTTGAAGTCACCGCACA
GCAGCAGCTGGACAGCATTGGAGTCGTTCTTGTGACCAGGTCGGAAACTG
TGGCTCGCCTCGTCGATGATCGTCTTCAACTCATTGCTAAGCATCATCGT
CTGGATGAGCTTGACGTCGCAGAACTCAGGGTCCCAGTGTATGTGCGCCG
TGCAGACGAGCAGCGGCTGCGAGATCTGCGTCACCTCGGACATCGGCTCC
CATGCGTTCTCCTTCACCTTGAGCAGTGCGGCCAGACCGATGTTATCCTT
AGGCATTACGCGGTTCAGCATGTTGTCCGAGCCCTCGGCATTGGCCATTG
CCCGCTGATTGAACTCGATCAATGATTCCTTGATCAGCGT

BS15291.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:17:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG31137-PA 1659 twin-RA 886..1653 790..23 3790 99.7 Minus
CG31137-PB 1638 twin-RB 865..1632 790..23 3790 99.7 Minus
CG31137-PE 1659 twin-RE 886..1653 790..23 3790 99.7 Minus
CG31137-PC 1704 twin-RC 931..1698 790..23 3790 99.7 Minus
CG31137-PD 1077 twin-RD 304..1071 790..23 3790 99.7 Minus
CG31137-PF 1659 twin-RF 886..1653 790..23 3790 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:17:19
Subject Length Description Subject Range Query Range Score Percent Strand
twin-RF 2690 CG31137-RF 1072..1839 790..23 3810 99.7 Minus
twin-RD 2950 CG31137-RD 1332..2099 790..23 3810 99.7 Minus
twin-RC 2586 CG31137-RC 968..1735 790..23 3810 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:17:11
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24198442..24199209 23..790 3810 99.7 Plus
Blast to na_te.dros performed on 2015-02-11 23:17:15 has no hits.

BS15291.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:22:38 Download gff for BS15291.3prime
Subject Subject Range Query Range Percent Splice Strand
twin-PF 886..1659 17..790 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:57:56 Download gff for BS15291.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31137-PF 886..1659 17..790 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:35:39 Download gff for BS15291.3prime
Subject Subject Range Query Range Percent Splice Strand
twin-RC 968..1741 17..790 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:38:20 Download gff for BS15291.3prime
Subject Subject Range Query Range Percent Splice Strand
twin-RC 968..1741 17..790 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:38:20 Download gff for BS15291.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 24198436..24199209 17..790 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:35:39 Download gff for BS15291.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20024158..20024931 17..790 99   Plus

BS15291.5prime Sequence

843 bp (793 high quality bases) assembled on 2006-10-24

> BS15291.5prime
GAAGTTATCAGTCGACATGTGTATCTTTAAAAAAAGAGACGCTTATCATC
AGGCGGTTATTATGAAAGGCAATCATTATAAAATGTCTCGTAACAAAGAC
AAATACGACAGCGCCAATCGGCGGCAGCAGATCTTTCTGTCGCAGGAGGA
CATAGCTGCGGGCAAGAAGACGAACTGGAGTGGCCTAGAGATTACTGGCT
GCGTCCGCAATATCAGCCCGTCGCTGTGGGAATTTGAGCATCTAACCGCC
CTCTACCTGAACGACAACCAGCTGCTGCGATTGCCCGCAGACGTTGGCAT
GCTGACCAGCCTCCGAACTTTGGACCTGTCCAGCAATAAGCTAAGAAGTC
TTCCCGCAGAGCTCGGCGAGCTCATCCAGTTGCGGGAGCTGTTGCTGAAC
AACAACTTTCTGCGCGTACTGCCTTACGAGATCGGCAAGCTGTTCCACCT
CGTCATACTCGGCCTCATGGGCAATCCGCTGCAAAAGGAGTTCATGAACA
TCTACAACGAACCGAACGGCACGCAGAAACTGCTCACCTACATGCTGGAC
AACTTGTCATTTACCGTGAATCCACCGCCCCAGAGGCCCTGGCTGCCACT
GGCCAAGCCCAACAAAACGCGACCAGCCTGCATTTTTACGGTCATGTGCT
ATAATGTGCTCTGCGACAAGTACGCGACGCGACAAATGTACGGATACTGT
CCGTCGTGGGCGCTATGCTGGGAGTACCGAAAAAAGTCGATTATCGACGA
GATACGGCACTATGCAGCGGACATTATCAGTCTGCAGGAGATCGAAACGG
AGCAATTCTATCACTTCTTCCTGCCGGAACTCAAGAACGATGG

BS15291.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:17:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG31137-PC 1704 twin-RC 1..827 17..843 4135 100 Plus
CG31137-PA 1659 twin-RA 1..782 62..843 3910 100 Plus
CG31137-PE 1659 twin-RE 1..782 62..843 3910 100 Plus
CG31137-PF 1659 twin-RF 1..782 62..843 3910 100 Plus
CG31137-PB 1638 twin-RB 1..761 83..843 3805 100 Plus
CG31137-PD 1077 twin-RD 1..200 644..843 1000 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:49:52
Subject Length Description Subject Range Query Range Score Percent Strand
twin-RC 2586 CG31137-RC 38..864 17..843 4135 100 Plus
twin-RE 3548 CG31137-RE 320..1128 35..843 4045 100 Plus
twin-RF 2690 CG31137-RF 162..968 37..843 4035 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:49:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24199374..24199587 843..630 1070 100 Minus
3R 32079331 3R 24219964..24220157 385..192 955 99.5 Minus
3R 32079331 3R 24219600..24219776 560..384 885 100 Minus
3R 32079331 3R 24220214..24220345 198..67 660 100 Minus
3R 32079331 3R 24199882..24199951 630..561 350 100 Minus
Blast to na_te.dros performed on 2015-02-13 12:49:51 has no hits.

BS15291.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:22:40 Download gff for BS15291.5prime
Subject Subject Range Query Range Percent Splice Strand
twin-PC 1..827 17..843 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:57:58 Download gff for BS15291.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31137-PC 1..827 17..843 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:04:45 Download gff for BS15291.5prime
Subject Subject Range Query Range Percent Splice Strand
twin-RC 38..864 17..843 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:30:15 Download gff for BS15291.5prime
Subject Subject Range Query Range Percent Splice Strand
twin-RC 38..864 17..843 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:30:15 Download gff for BS15291.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 24199374..24199587 630..843 100 <- Minus
3R 24199883..24199951 561..629 100 <- Minus
3R 24219600..24219775 385..560 100 <- Minus
3R 24219965..24220151 198..384 100 <- Minus
3R 24220215..24220343 69..197 100 <- Minus
3R 24220532..24220563 37..68 100 <- Minus
3R 24220828..24220847 17..36 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:04:45 Download gff for BS15291.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20025096..20025309 630..843 100 <- Minus
arm_3R 20025605..20025673 561..629 100 <- Minus
arm_3R 20045322..20045497 385..560 100 <- Minus
arm_3R 20045687..20045873 198..384 100 <- Minus
arm_3R 20045937..20046065 69..197 100 <- Minus
arm_3R 20046254..20046285 37..68 100 <- Minus
arm_3R 20046550..20046569 17..36 100   Minus

BS15291.pep Sequence

Translation from 16 to 1719

> BS15291.pep
MCIFKKRDAYHQAVIMKGNHYKMSRNKDKYDSANRRQQIFLSQEDIAAGK
KTNWSGLEITGCVRNISPSLWEFEHLTALYLNDNQLLRLPADVGMLTSLR
TLDLSSNKLRSLPAELGELIQLRELLLNNNFLRVLPYEIGKLFHLVILGL
MGNPLQKEFMNIYNEPNGTQKLLTYMLDNLSFTVNPPPQRPWLPLAKPNK
TRPACIFTVMCYNVLCDKYATRQMYGYCPSWALCWEYRKKSIIDEIRHYA
ADIISLQEIETEQFYHFFLPELKNDGYEGIFSPKSRAKTMSELERKYVDG
CAIFFRASKFTLIKESLIEFNQLAMANAEGSDNMLNRVMPKDNIGLAALL
KVKENAWEPMSEVTQISQPLLVCTAHIHWDPEFCDVKLIQTMMLSNELKT
IIDEASHSFRPGHKNDSNAVQLLLCGDFNSLPDSGVVEFLGKGRVSMDHL
DFKDMGYKSCLQRLLSNDTNEFTHSFKLASAYNEDIMPHTNYTFDFKGII
DYIFYTKTGMVPLGLLGPVSNDWLRENKVVGCPHPHIPSDHFPLLVELEL
MHTASQQAPPNGLINRR*

BS15291.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:58:31
Subject Length Description Subject Range Query Range Score Percent Strand
twin-PC 567 CG31137-PC 1..567 1..567 3020 100 Plus
twin-PF 552 CG31137-PF 1..552 16..567 2939 100 Plus
twin-PE 552 CG31137-PE 1..552 16..567 2939 100 Plus
twin-PA 552 CG31137-PA 1..552 16..567 2939 100 Plus
twin-PB 545 CG31137-PB 1..545 23..567 2897 100 Plus