Clone Sequence Records
BS15302.3prime Sequence
504 bp (504 high quality bases) assembled on 2006-10-24
> BS15302.3prime
ATGGTCTAGAAAGCTTTTACAATAGACGACGGTGACGGTGTACACGGCGA
ACCACTCGCCCCTGACCACCACCTCCATTCTGATTACTCTGGTTGGCCTG
ACGCCTCTCGCGGCGGAGCTGACGCCTCAGCCGGCGCAGCCGACGCCTGA
GCCTAATCACTTCCTGGCTGCTGCTGGATCCACTGTCACTGGGCGATGTG
GGCGTAGCTGGTGATGTCGAGGAAGCGGGCGCATCAGGAGTAGCTGGCGA
GGACGGTGTTCCAGTCGCTGGAGTTGGCGAGGTCGGTGTACCAGCAGCTG
GGGATGCTGAAGGTGGTGTTCCAGTCGCTGGGGATGGTGAGGGCGGTGTT
CCAGTCGCTGGAGGTGGCGAGGTTGGGGTTCCAGCCGGTGGAGATGACGC
GGGTGGGGATCCTGCCGCAGGTGGAGAATCGGCGTAGGCAGTTGCTATTA
GGGCCAAAAGCCCAAAGGCGATAACGAATTGGCAACGCATGTCGACTGAT
AACT
BS15302.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:18:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11300-PA | 474 | CG11300-RA | 1..474 | 490..17 | 2370 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:21:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11300-RA | 581 | CG11300-RA | 35..510 | 490..15 | 2380 | 100 | Minus |
CG11300-RA | 581 | CG11300-RA | 108..250 | 387..245 | 250 | 79.2 | Minus |
CG11300-RA | 581 | CG11300-RA | 138..280 | 417..275 | 250 | 79.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 21:21:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23751949..23752424 | 490..15 | 2380 | 100 | Minus |
2R | 25286936 | 2R | 23752022..23752164 | 387..245 | 250 | 78.3 | Minus |
2R | 25286936 | 2R | 23752052..23752194 | 417..275 | 250 | 78.3 | Minus |
Blast to na_te.dros performed on 2015-02-04 21:21:25 has no hits.
BS15302.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:22:50 Download gff for
BS15302.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-PA | 1..474 | 17..490 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:58:14 Download gff for
BS15302.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-PA | 1..474 | 17..490 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:42:22 Download gff for
BS15302.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-RA | 35..512 | 11..490 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-05 00:46:00 Download gff for
BS15302.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-RA | 35..512 | 11..490 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-05 00:46:00 Download gff for
BS15302.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23751949..23752426 | 11..490 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:42:22 Download gff for
BS15302.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19639472..19639949 | 11..490 | 99 | | Minus |
BS15302.5prime Sequence
504 bp (504 high quality bases) assembled on 2006-10-24
> BS15302.5prime
GAAGTTATCCTTCGACATGCGTTGCCAATTCGTTATCGCCTTTGGGCTTT
TGGCCCTAATAGCAACTGCCTACGCCGATTCTCCTCCTGGGGCAGGATCC
CCACCCGCGTCATCTCCACCGGCTGGAACCCCAACCTCGCCACCTCCAGC
GACTGGAACACCGCCCTCACCATCCCCAGCGACTGGAACACCACCTTCAG
CATCCCCAGCTGCTGGTACACCGACCTCGCCAACTCCAGCGACTGGAACA
CCGTCCTCGCCAGCTACTCCTGATGCGCCCGCTTCCTCGACATCACCAGC
TACGCCCACATCGCCCAGTGACAGTGGATCCAGCAGCAGCCAGGAAGTGA
TTAGGCTCAGGCGTCGGCTGCGCCGGCTGAGGCGTCAGCTCCGCCGCGAG
AGGCGTCAGGCCAACCAGAGTAATCAGAATGGAGGTGGTGGTCAGGGGCG
AGTGGTTCGCCGTGTACACCGTCACCGTCGTCTATTGTAAAAGCTTTCTA
GACC
BS15302.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:18:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11300-PA | 474 | CG11300-RA | 1..474 | 17..490 | 2320 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:54:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11300-RA | 581 | CG11300-RA | 35..510 | 17..492 | 2350 | 99.6 | Plus |
CG11300-RA | 581 | CG11300-RA | 108..250 | 120..262 | 250 | 79.2 | Plus |
CG11300-RA | 581 | CG11300-RA | 139..280 | 91..232 | 245 | 79 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:54:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23751949..23752424 | 17..492 | 2350 | 99.6 | Plus |
2R | 25286936 | 2R | 23752022..23752164 | 120..262 | 250 | 78.3 | Plus |
2R | 25286936 | 2R | 23752053..23752194 | 91..232 | 245 | 78.2 | Plus |
Blast to na_te.dros performed on 2015-02-13 05:54:29 has no hits.
BS15302.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:22:51 Download gff for
BS15302.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-PA | 1..474 | 17..490 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:58:15 Download gff for
BS15302.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-PA | 1..474 | 17..490 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:54:16 Download gff for
BS15302.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-RA | 35..512 | 17..496 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:56:29 Download gff for
BS15302.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-RA | 35..512 | 17..496 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:56:29 Download gff for
BS15302.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23751949..23752426 | 17..496 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:54:16 Download gff for
BS15302.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19639472..19639949 | 17..496 | 99 | | Plus |
BS15302.complete Sequence
506 bp assembled on 2006-11-01
GenBank Submission: FJ637912
> BS15302.complete
GAAGTTATCAGTCGACATGCGTTGCCAATTCGTTATCGCCTTTGGGCTTT
TGGCCCTAATAGCAACTGCCTACGCCGATTCTCCACCTGCGGCAGGATCC
CCACCCGCGTCATCTCCACCGGCTGGAACCCCAACCTCGCCACCTCCAGC
GACTGGAACACCGCCCTCACCATCCCCAGCGACTGGAACACCACCTTCAG
CATCCCCAGCTGCTGGTACACCGACCTCGCCAACTCCAGCGACTGGAACA
CCGTCCTCGCCAGCTACTCCTGATGCGCCCGCTTCCTCGACATCACCAGC
TACGCCCACATCGCCCAGTGACAGTGGATCCAGCAGCAGCCAGGAAGTGA
TTAGGCTCAGGCGTCGGCTGCGCCGGCTGAGGCGTCAGCTCCGCCGCGAG
AGGCGTCAGGCCAACCAGAGTAATCAGAATGGAGGTGGTGGTCAGGGGCG
AGTGGTTCGCCGTGTACACCGTCACCGTCGTCTATTGTAAAAGCTTTCTA
GACCAT
BS15302.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:51:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11300-RA | 474 | CG11300-PA | 1..474 | 17..490 | 2370 | 100 | Plus |
CG11300-RA | 474 | CG11300-PA | 74..216 | 120..262 | 250 | 78.3 | Plus |
CG11300-RA | 474 | CG11300-PA | 104..246 | 90..232 | 250 | 78.3 | Plus |
CG11300-RA | 474 | CG11300-PA | 95..156 | 201..262 | 175 | 85.5 | Plus |
CG11300-RA | 474 | CG11300-PA | 185..246 | 111..172 | 175 | 85.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:51:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11300-RA | 581 | CG11300-RA | 35..510 | 17..492 | 2380 | 100 | Plus |
CG11300-RA | 581 | CG11300-RA | 108..250 | 120..262 | 250 | 78.3 | Plus |
CG11300-RA | 581 | CG11300-RA | 138..280 | 90..232 | 250 | 78.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:51:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23751949..23752424 | 17..492 | 2380 | 100 | Plus |
2R | 25286936 | 2R | 23752022..23752164 | 120..262 | 250 | 78.3 | Plus |
2R | 25286936 | 2R | 23752052..23752194 | 90..232 | 250 | 78.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 23:51:41 has no hits.
BS15302.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:32:58 Download gff for
BS15302.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-RA | 1..474 | 17..490 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:05:32 Download gff for
BS15302.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-RA | 2..483 | 14..496 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:40:03 Download gff for
BS15302.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-RA | 35..506 | 17..488 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:32:58 Download gff for
BS15302.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-RA | 2..483 | 14..496 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:09:49 Download gff for
BS15302.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-RA | 35..506 | 17..488 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:09:49 Download gff for
BS15302.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23751949..23752420 | 17..488 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:40:03 Download gff for
BS15302.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19639472..19639943 | 17..488 | 100 | | Plus |
BS15302.pep Sequence
Translation from 16 to 489
> BS15302.pep
MRCQFVIAFGLLALIATAYADSPPAAGSPPASSPPAGTPTSPPPATGTPP
SPSPATGTPPSASPAAGTPTSPTPATGTPSSPATPDAPASSTSPATPTSP
SDSGSSSSQEVIRLRRRLRRLRRQLRRERRQANQSNQNGGGGQGRVVRRV
HRHRRLL*
BS15302.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:30:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11300-PA | 157 | CG11300-PA | 1..157 | 1..157 | 812 | 100 | Plus |
CG34105-PA | 157 | CG34105-PA | 1..155 | 1..152 | 242 | 38.1 | Plus |
CG12491-PA | 157 | CG12491-PA | 1..155 | 1..152 | 242 | 38.1 | Plus |
CG13560-PB | 181 | CG13560-PB | 1..174 | 1..137 | 198 | 35.4 | Plus |
CG13560-PA | 181 | CG13560-PA | 1..174 | 1..137 | 198 | 35.4 | Plus |