Clone BS15307 Report

Search the DGRC for BS15307

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:153
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptCG15219-RC
Protein status:BS15307.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15307.3prime Sequence

390 bp (390 high quality bases) assembled on 2006-10-24

> BS15307.3prime
ATGGTCTAGAAAGCTTCTACGAAGTGCATGGGTTTACTTTAGTAGTATGG
ATTTCCATTGCCCCGCGACTGATAAGCTTGACCTTCTGGGCCGCCAAGGC
CGGGCAATGTATTATAGTAGTCGCCTTGCCCACTGCTCCGCTGTAAAGCC
CGTTGCGAGAGTTCATCTCACGAAGCATTTTTGTGTATCGCAAGGGACTG
CGATAGCCAGGACCACCAAGCGATGCAGATGCACCATTAAAATTTGAAGA
ACCTTGTCCGCAATTACTCTGCTGCTGGCTATATCCATGGCCACTGCTCG
TTTGGTTGTACAGCATTTCAAAGCCCTCGCCACCTTGGCTATAACCATCG
TATTGCATACCATTTCCGTATTCCATGTCGACTGATAACT

BS15307.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:18:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG15219-PB 360 CG15219-RB 1..360 376..17 1800 100 Minus
CG15219-PA 354 CG15219-RA 1..234 376..143 1170 100 Minus
CG15219-PA 354 CG15219-RA 250..354 143..39 525 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:00:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG15219-RC 505 CG15219-RC 111..473 377..15 1815 100 Minus
CG15219-RA 521 CG15219-RA 111..489 377..15 1645 95.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:00:39
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22105116..22105299 144..327 920 100 Plus
2L 23513712 2L 22104923..22105051 15..143 645 100 Plus
2L 23513712 2L 22105350..22105402 325..377 265 100 Plus
Blast to na_te.dros performed on 2015-02-13 01:00:42 has no hits.

BS15307.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:22:58 Download gff for BS15307.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15219-PB 1..360 17..376 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:58:26 Download gff for BS15307.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15219-PB 1..360 17..376 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:25:09 Download gff for BS15307.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15219-RC 101..476 11..390 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:05:04 Download gff for BS15307.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15219-RC 101..476 11..390 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:05:04 Download gff for BS15307.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 22104920..22105051 11..143 98 <- Plus
2L 22105116..22105297 144..325 100 <- Plus
2L 22105351..22105411 326..390 92   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:25:09 Download gff for BS15307.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22104920..22105051 11..143 98 <- Plus
arm_2L 22105116..22105297 144..325 100 <- Plus
arm_2L 22105351..22105411 326..390 92   Plus

BS15307.5prime Sequence

390 bp (390 high quality bases) assembled on 2006-10-24

> BS15307.5prime
GAAGTTACCCTTCGACATGGAATACGGAAATGGTATGCAATACGATGGTT
ATAGCCAAGGTGGCGAGGGCTTTGAAATGCTGTCCAACCAAACGAGCAGT
GGCCATGGATATAGCCAGCAGCAGAGTAATTGCGGACAAGGTTCTTCAAA
TTTTAATGGTGCATCTGCATCGCTTGGTGGTCCTGGCTATCGCAGTCCCT
TGCGATACACAAAAATGCTTCGTGAGATGAACTCTCGCAACGGGCTTTAC
AGCGGAGCAGTGGGCAAGGCGACTACTATAATACATTGCCCGGCCTTGGC
GGCCCAGAAGGTCAAGCTTATCAGTCGCGGGGCAATGGAAATCCATACTA
CTAAAGTAAACCCATGCACTTCGTAGAAGCTTTCTAGACC

BS15307.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:18:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG15219-PB 360 CG15219-RB 1..360 17..376 1775 99.7 Plus
CG15219-PA 354 CG15219-RA 1..234 17..250 1145 99.5 Plus
CG15219-PA 354 CG15219-RA 250..354 250..354 525 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:07:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG15219-RC 505 CG15219-RC 111..473 16..378 1800 99.7 Plus
CG15219-RA 521 CG15219-RA 111..489 16..378 1630 95.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:07:18
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22105116..22105299 249..66 905 99.5 Minus
2L 23513712 2L 22104923..22105051 378..250 645 100 Minus
2L 23513712 2L 22105350..22105402 68..16 265 100 Minus
Blast to na_te.dros performed on 2015-02-12 16:07:19 has no hits.

BS15307.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:22:59 Download gff for BS15307.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15219-PB 1..360 17..376 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:58:27 Download gff for BS15307.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15219-PB 1..360 17..376 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:24:39 Download gff for BS15307.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15219-RC 105..476 11..382 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:42:47 Download gff for BS15307.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15219-RC 105..476 11..382 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:42:47 Download gff for BS15307.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 22104920..22105051 250..382 98 <- Minus
2L 22105116..22105297 68..249 99 <- Minus
2L 22105351..22105408 11..67 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:24:39 Download gff for BS15307.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22104920..22105051 250..382 98 <- Minus
arm_2L 22105116..22105297 68..249 99 <- Minus
arm_2L 22105351..22105408 11..67 96   Minus

BS15307.complete Sequence

392 bp assembled on 2006-11-01

GenBank Submission: KX800344

> BS15307.complete
GAAGTTATCAGTCGACATGGAATACGGAAATGGTATGCAATACGATGGTT
ATAGCCAAGGTGGCGAGGGCTTTGAAATGCTGTACAACCAAACGAGCAGT
GGCCATGGATATAGCCAGCAGCAGAGTAATTGCGGACAAGGTTCTTCAAA
TTTTAATGGTGCATCTGCATCGCTTGGTGGTCCTGGCTATCGCAGTCCCT
TGCGATACACAAAAATGCTTCGTGAGATGAACTCTCGCAACGGGCTTTAC
AGCGGAGCAGTGGGCAAGGCGACTACTATAATACATTGCCCGGCCTTGGC
GGCCCAGAAGGTCAAGCTTATCAGTCGCGGGGCAATGGAAATCCATACTA
CTAAAGTAAACCCATGCACTTCGTAGAAGCTTTCTAGACCAT

BS15307.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:16:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG15219-RC 360 CG15219-PC 1..360 17..376 1800 100 Plus
CG15219-RA 354 CG15219-PA 1..354 17..354 1495 95.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:16:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG15219-RC 505 CG15219-RC 111..473 16..378 1815 100 Plus
CG15219-RA 521 CG15219-RA 111..489 16..378 1620 95.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:16:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22105116..22105299 249..66 920 100 Minus
2L 23513712 2L 22104923..22105051 378..250 645 100 Minus
2L 23513712 2L 22105350..22105402 68..16 265 100 Minus
Blast to na_te.dros performed on 2014-11-27 16:16:35 has no hits.

BS15307.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:32:59 Download gff for BS15307.complete
Subject Subject Range Query Range Percent Splice Strand
CG15219-RA 1..233 17..249 100 <- Plus
CG15219-RA 248..354 250..354 98   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:05:33 Download gff for BS15307.complete
Subject Subject Range Query Range Percent Splice Strand
CG15219-RA 94..338 2..249 97 <- Plus
CG15219-RA 353..486 250..382 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:51:41 Download gff for BS15307.complete
Subject Subject Range Query Range Percent Splice Strand
CG15219-RC 112..471 17..376 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:32:59 Download gff for BS15307.complete
Subject Subject Range Query Range Percent Splice Strand
CG15219-RA 94..338 2..249 97 <- Plus
CG15219-RA 353..486 250..382 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:14:55 Download gff for BS15307.complete
Subject Subject Range Query Range Percent Splice Strand
CG15219-RC 112..471 17..376 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:14:55 Download gff for BS15307.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22104925..22105051 250..376 100 <- Minus
2L 22105116..22105297 68..249 100 <- Minus
2L 22105351..22105401 17..67 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:51:41 Download gff for BS15307.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22104925..22105051 250..376 100 <- Minus
arm_2L 22105116..22105297 68..249 100 <- Minus
arm_2L 22105351..22105401 17..67 100   Minus

BS15307.pep Sequence

Translation from 16 to 375

> BS15307.pep
MEYGNGMQYDGYSQGGEGFEMLYNQTSSGHGYSQQQSNCGQGSSNFNGAS
ASLGGPGYRSPLRYTKMLREMNSRNGLYSGAVGKATTIIHCPALAAQKVK
LISRGAMEIHTTKVNPCTS*

BS15307.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:30:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG15219-PC 119 CG15219-PC 1..119 1..119 633 100 Plus
CG15219-PA 117 CG15219-PA 1..79 1..79 428 100 Plus