Clone BS15320 Report

Search the DGRC for BS15320

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:153
Well:20
Vector:pDNR-Dual
Associated Gene/TranscriptCG3292-RA
Protein status:BS15320.pep: full length peptide match
Sequenced Size:1664

Clone Sequence Records

BS15320.3prime Sequence

855 bp (744 high quality bases) assembled on 2006-10-24

> BS15320.3prime
ATGGTCTAGAAAGCTTCTAGTCCTCATTGTCACAGAGAGTGGGTCCATTG
CCAATGCAGGAGGCATAGGCCATCAGGTGGGGAATGGTGCTCTGCTGCAT
CACGCCGGTGAAGAGATGACTTTGCGGACCAGTAGCGAAGATTCCCACAT
CATCGCCAGCATGAACGCCAATAGTGCCGTGGATGTAGCTGGGGTGGATG
AAGTCTTCCGCTCCAATTTGATCCGTAAGATCGATGCGCTGGCCGTGCTC
ATCCAGATACTGATTGGTTCCCACTGCATAGTTGAGAGTGGCGTACTTAA
CTCCATTCACATCGGTGTCATCCTGATTGAGACCCAAAATGGGGGTTCCT
CTGCCAGGATAACCAGAGATGGTCAATGGATGGGCGTGATCGGAGGTGAC
TACAATCAGGGTCTCTTCGGGATCGGTTATATCCAGAGCCTCCTGAACAG
CCTGCTCGAACTGAAGCGTCTCTGAGAGCGAATAGGTTGGGGAGTTGAAG
TGGTTGCCATAATCGATGAGTCCACCCTCGACGAACAGAAAGTAGCCACC
ATCGCGTTTGCTGACCACCTCGATTGCTTTGCGCGTCATTTCCGCCAGTG
TGGGCTCCTCCTTGGGATCGGCCATCTTATTGAAGCTCATCACTCCCGAG
CGGAAGGTACCAATCAGGTTGGTGATCTTCGAGACATTCACGCTCAGCAG
CTGGTTACGATTGTAGGCTAAAACACCGCCGGGATGCAGTCCCTGCCAGC
GAGACAGCAGGTTTACTCCGTCGGAACGCTCGCCCTTCTTGTTGAACGGA
TCCGTGATCGTGTTGGGCAGGAACTTGCCATTCCGCCGCCCAGCATCACA
ATCAA

BS15320.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:18:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG3292-PA 1632 CG3292-RA 819..1632 830..17 4070 100 Minus
CG3290-PA 1617 CG3290-RA 1513..1565 112..60 215 96.2 Minus
CG3264-PA 1602 CG3264-RA 1504..1562 121..63 195 93.2 Minus
CG3290-PA 1617 CG3290-RA 1358..1391 267..234 145 97 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:08:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG3292-RA 1713 CG3292-RA 841..1677 850..15 4160 99.9 Minus
CG3264-RB 2182 CG3264-RB 1306..1616 361..51 470 77.7 Minus
CG3264-RA 1737 CG3264-RA 1306..1616 361..51 470 77.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:08:42
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22203985..22204631 205..850 3185 99.8 Plus
2R 25286936 2R 22203730..22203921 15..206 960 100 Plus
2R 25286936 2R 22209030..22209340 51..361 460 76.5 Plus
2R 25286936 2R 22206168..22206532 44..408 355 73.2 Plus
Blast to na_te.dros performed on 2015-02-13 07:08:43 has no hits.

BS15320.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:23:23 Download gff for BS15320.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3292-PA 796..1632 17..853 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:59:00 Download gff for BS15320.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3292-PA 796..1632 17..853 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 20:51:09 Download gff for BS15320.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3292-RA 839..1682 7..853 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:29:39 Download gff for BS15320.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3292-RA 839..1682 7..853 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:29:39 Download gff for BS15320.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 22203725..22203919 7..204 98 <- Plus
2R 22203985..22204633 205..853 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 20:51:09 Download gff for BS15320.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18091230..18091424 7..204 98 <- Plus
arm_2R 18091490..18092138 205..853 99   Plus

BS15320.5prime Sequence

894 bp (825 high quality bases) assembled on 2006-10-24

> BS15320.5prime
GAAGTTATCAGTCGACATGAAGACTTTCGTAGCCATTAGCCTGGTGTTAT
GCACCCTGGTGGCCACCTCCTTGGCTGCTTCCATAGACATGCCCGAGATC
CATAATCAGTTCCAGCTGGTGGGAGGATCGGTGAGCACAGCAAAAACCCG
CGAAGGAAACCTTATCGACCCAAATGCCATGGCCAAGGGAAAACCCGGAC
CAGAGGAGGAGAAGAACGCGCAGTTCTGGTACGATCTTGCCTACGAGGAG
ATCGCCAAGCGCCTGGAACAGCCACAATTGGACAAGAGGAAGGCCAAGAA
TGTTATCCTGTTCCTCGGCGATGGCATGTCCCTGTCCACGGTGGCAGCCG
CCCGCATCCACAAGGGTCAGCTTAAGGGCAATACCGGCGAGGAGGACTCC
CTGAGCTTCGAGAAGTTCCCCTACACCGGCCTGAGCAGGACATACTGCTC
CAATGCCCAGGTTCCCGACTCCGCCTGCACTGCCACCGCTTACTTGTGCG
GTGTGAAGACTAATATCGTGGCTTTGGGAATTACGGCGGCAGTGAGCTTC
AACAACTGCAGCGGCAGCGAGGATCCGGCCAATCAGGTGGACTCCATCGC
AGCCTGGGCCCAGGCTGCTGGAAAGGCCACTGGCATTGTGACCACCACCA
CTCTGACCCACGCCAGTCCATCAGGTGCATATGCCAAGACCACCAACCGA
TTCTTCGAGAGCGACACGGATATTCTGACCTACGGCGAGGGACAGAACGA
TCCGGCCACCTGCACGGACATTGCCACCCAACTGATTACCCAGGCTCCCG
GCAAGAACTTCGATGTGATGCTGGGCGGCGGAATTGGCAAGTTCCTGCCA
ACACGATCACGGATCCGTTCAACAAGAAGGGCGAGCGTTCCGAC

BS15320.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:18:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG3292-PA 1632 CG3292-RA 1..833 17..849 4165 100 Plus
CG3292-PA 1632 CG3292-RA 833..879 848..894 235 100 Plus
CG3264-PA 1602 CG3264-RA 382..467 416..501 230 90.6 Plus
CG3264-PA 1602 CG3264-RA 571..656 605..690 205 89.5 Plus
CG3290-PA 1617 CG3290-RA 605..659 636..690 150 90.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:27:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG3292-RA 1713 CG3292-RA 44..922 17..894 4370 99.9 Plus
CG3264-RB 2182 CG3264-RB 297..845 289..846 890 77.8 Plus
CG3264-RA 1737 CG3264-RA 297..845 289..846 890 77.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:27:47
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22204550..22205006 894..439 2235 99.8 Minus
2R 25286936 2R 22205070..22205419 439..90 1750 100 Minus
2R 25286936 2R 22209859..22210257 846..439 595 77 Minus
2R 25286936 2R 22207012..22207410 846..439 490 75.2 Minus
2R 25286936 2R 22205478..22205550 89..17 365 100 Minus
2R 25286936 2R 22210319..22210469 439..289 260 78.1 Minus
X 23542271 X 15588110..15588204 416..510 190 80 Plus
Blast to na_te.dros performed on 2015-02-10 16:27:51 has no hits.

BS15320.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:23:24 Download gff for BS15320.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3292-PA 1..879 17..894 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:59:01 Download gff for BS15320.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3292-PA 1..879 17..894 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 02:40:17 Download gff for BS15320.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3292-RA 44..922 17..894 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:32:07 Download gff for BS15320.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3292-RA 44..922 17..894 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:32:07 Download gff for BS15320.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 22204550..22205005 440..894 99 <- Minus
2R 22205070..22205419 90..439 100 <- Minus
2R 22205478..22205550 17..89 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 02:40:17 Download gff for BS15320.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18092055..18092510 440..894 99 <- Minus
arm_2R 18092575..18092924 90..439 100 <- Minus
arm_2R 18092983..18093055 17..89 100   Minus

BS15320.complete Sequence

1664 bp assembled on 2010-01-09

GenBank Submission: KX801724

> BS15320.complete
GAAGTTATCAGTCGACATGAAGACTTTCGTAGCCATTAGCCTGGTGTTAT
GCACCCTGGTGGCCACCTCCTTGGCTGCTTCCATAGACATGCCCGAGATC
CATAATCAGTTCCAGCTGGTGGGAGGATCGGTGAGCACAGCAAAAACCCG
CGAAGGAAACCTTATCGACCCAAATGCCATGGCCAAGGGAAAACCCGGAC
CAGAGGAGGAGAAGAACGCGCAGTTCTGGTACGATCTTGCCTACGAGGAG
ATCGCCAAGCGCCTGGAACAGCCACAATTGGACAAGAGGAAGGCCAAGAA
TGTTATCCTGTTCCTCGGCGATGGCATGTCCCTGTCCACGGTGGCAGCCG
CCCGCATCCACAAGGGTCAGCTTAAGGGCAATACCGGCGAGGAGGACTCC
CTGAGCTTCGAGAAGTTCCCCTACACCGGCCTGAGCAGGACATACTGCTC
CAATGCCCAGGTTCCCGACTCCGCCTGCACTGCCACCGCTTACTTGTGCG
GTGTGAAGACTAATATCGTGGCTTTGGGAATTACGGCGGCAGTGAGCTTC
AACAACTGCAGCGGCAGCGAGGATCCGGCCAATCAGGTGGACTCCATCGC
AGCCTGGGCCCAGGCTGCTGGAAAGGCCACTGGCATTGTGACCACCACCA
CTCTGACCCACGCCAGTCCATCAGGTGCATATGCCAAGACCACCAACCGA
TTCTTCGAGAGCGACACGGATATTCTGACCTACGGCGAGGGACAGAACGA
TCCGGCCACCTGCACGGACATTGCCACCCAACTGATTACCCAGGCTCCCG
GCAAGAACTTCGATGTGATGCTGGGCGGCGGAATTGGCAAGTTCCTGCCC
AACACGATCACGGATCCGTTCAACAAGAAGGGCGAGCGTTCCGACGGAGT
AAACCTGCTGTCTCGCTGGCAGGGACTGCATCCCGGCGGTGTTTTAGCCT
ACAATCGTAACCAGCTGCTGAGCGTGAATGTCTCGAAGATCACCAACCTG
ATTGGTACCTTCCGCTCGGGAGTGATGAGCTTCAATAAGATGGCCGATCC
CAAGGAGGAGCCCACACTGGCGGAAATGACGCGCAAAGCAATCGAGGTGG
TCAGCAAACGCGATGGTGGCTACTTTCTGTTCGTCGAGGGTGGACTCATC
GATTATGGCAACCACTTCAACTCCCCAACCTATTCGCTCTCAGAGACGCT
TCAGTTCGAGCAGGCTGTTCAGGAGGCTCTGGATATAACCGATCCCGAAG
AGACCCTGATTGTAGTCACCTCCGATCACGCCCATCCATTGACCATCTCT
GGTTATCCTGGCAGAGGAACCCCCATTTTGGGTCTCAATCAGGATGACAC
CGATGTGAATGGAGTTAAGTACGCCACTCTCAACTATGCAGTGGGAACCA
ATCAGTATCTGGATGAGCACGGCCAGCGCATCGATCTTACGGATCAAATT
GGAGCGGAAGACTTCATCCACCCCAGCTACATCCACGGCACTATTGGCGT
TCATGCTGGCGATGATGTGGGAATCTTCGCTACTGGTCCGCAAAGTCATC
TCTTCACCGGCGTGATGCAGCAGAGCACCATTCCCCACCTGATGGCCTAT
GCCTCCTGCATTGGCAATGGACCCACTCTCTGTGACAATGAGGACTAGAA
GCTTTCTAGACCAT

BS15320.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:15:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG3292-RA 1632 CG3292-PA 1..1632 17..1648 8160 100 Plus
CG3264-RB 1602 CG3264-PB 255..884 289..927 910 76.5 Plus
CG3264-RA 1602 CG3264-PA 255..884 289..927 910 76.5 Plus
CG3264-RB 1602 CG3264-PB 1264..1574 1304..1614 460 76.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:15:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG3292-RA 1713 CG3292-RA 44..1677 17..1650 8170 100 Plus
CG3264-RB 2182 CG3264-RB 297..926 289..927 910 76.5 Plus
CG3264-RA 1737 CG3264-RA 297..926 289..927 910 76.5 Plus
CG3264-RB 2182 CG3264-RB 1306..1616 1304..1614 460 76.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:15:46
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22203985..22205006 1460..439 5110 100 Minus
2R 25286936 2R 22205070..22205419 439..90 1750 100 Minus
2R 25286936 2R 22203730..22203921 1650..1459 960 100 Minus
2R 25286936 2R 22209778..22210257 927..439 655 76.1 Minus
2R 25286936 2R 22207006..22207410 852..439 505 75.4 Minus
2R 25286936 2R 22209030..22209340 1614..1304 460 76.5 Minus
2R 25286936 2R 22205478..22205550 89..17 365 100 Minus
2R 25286936 2R 22206168..22206532 1621..1257 355 73.2 Minus
2R 25286936 2R 22210319..22210469 439..289 260 78.1 Minus
X 23542271 X 15588110..15588204 416..510 190 80 Plus
Blast to na_te.dros performed on 2014-11-27 01:15:47 has no hits.

BS15320.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:16:53 Download gff for BS15320.complete
Subject Subject Range Query Range Percent Splice Strand
CG3292-RA 1..1632 17..1648 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 10:05:47 Download gff for BS15320.complete
Subject Subject Range Query Range Percent Splice Strand
CG3292-RA 27..1658 17..1648 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:49:28 Download gff for BS15320.complete
Subject Subject Range Query Range Percent Splice Strand
CG3292-RA 44..1675 17..1648 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:40:45 Download gff for BS15320.complete
Subject Subject Range Query Range Percent Splice Strand
CG3292-RA 27..1658 17..1648 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:22:03 Download gff for BS15320.complete
Subject Subject Range Query Range Percent Splice Strand
CG3292-RA 44..1675 17..1648 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:22:03 Download gff for BS15320.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22203732..22203919 1461..1648 100 <- Minus
2R 22203985..22205005 440..1460 100 <- Minus
2R 22205070..22205419 90..439 100 <- Minus
2R 22205478..22205550 17..89 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:49:28 Download gff for BS15320.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18091237..18091424 1461..1648 100 <- Minus
arm_2R 18091490..18092510 440..1460 100 <- Minus
arm_2R 18092575..18092924 90..439 100 <- Minus
arm_2R 18092983..18093055 17..89 100   Minus

BS15320.pep Sequence

Translation from 16 to 1647

> BS15320.pep
MKTFVAISLVLCTLVATSLAASIDMPEIHNQFQLVGGSVSTAKTREGNLI
DPNAMAKGKPGPEEEKNAQFWYDLAYEEIAKRLEQPQLDKRKAKNVILFL
GDGMSLSTVAAARIHKGQLKGNTGEEDSLSFEKFPYTGLSRTYCSNAQVP
DSACTATAYLCGVKTNIVALGITAAVSFNNCSGSEDPANQVDSIAAWAQA
AGKATGIVTTTTLTHASPSGAYAKTTNRFFESDTDILTYGEGQNDPATCT
DIATQLITQAPGKNFDVMLGGGIGKFLPNTITDPFNKKGERSDGVNLLSR
WQGLHPGGVLAYNRNQLLSVNVSKITNLIGTFRSGVMSFNKMADPKEEPT
LAEMTRKAIEVVSKRDGGYFLFVEGGLIDYGNHFNSPTYSLSETLQFEQA
VQEALDITDPEETLIVVTSDHAHPLTISGYPGRGTPILGLNQDDTDVNGV
KYATLNYAVGTNQYLDEHGQRIDLTDQIGAEDFIHPSYIHGTIGVHAGDD
VGIFATGPQSHLFTGVMQQSTIPHLMAYASCIGNGPTLCDNED*

BS15320.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:45:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG3292-PA 543 CG3292-PA 1..543 1..543 2833 100 Plus
CG3290-PA 538 CG3290-PA 12..531 7..539 1781 64 Plus
CG3264-PB 533 CG3264-PB 13..533 9..541 1772 63.7 Plus
CG3264-PA 533 CG3264-PA 13..533 9..541 1772 63.7 Plus
CG5656-PA 523 CG5656-PA 36..514 64..540 1102 47.3 Plus