Clone BS15321 Report

Search the DGRC for BS15321

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:153
Well:21
Vector:pDNR-Dual
Associated Gene/TranscriptAg5r2-RA
Protein status:BS15321.pep: full length peptide match
Sequenced Size:797

Clone Sequence Records

BS15321.complete Sequence

797 bp assembled on 2010-02-09

GenBank Submission: KX800355

> BS15321.complete
GAAGTTATCAGTCGACATGAAACTCGCTCTGCTTGCCATCCTGATCGTTT
CCTTGGCCCTGGCCCAGGCCACCGACTATTGTTCGTCGGACATCTGCAAC
GGTGGCTCCCACATCGCCTGTGGGCATAGCAACTGGTGGGACAGTAGCTG
TCCCGGCGATGCCGAGCTGATCGACATCAACGATGACTACAAGTGGGTCT
TTGTCCACTCGCACAACGACAAGAGGAACTACATTGCCGGTGGCTACGAT
TCCAATCACAATGCCGCCTGCCGTATGGCCACCATGGAGTGGGACGATGA
GCTGGCCTATCTGGCCTCCCTGAATGTGCGCCAGTGCAACATGGTGCACG
ATAGCTGCCACAACACCGACGCCTTCAAGTACTCCGGCCAGAATCTGGCA
TGGCAGGCCTACTCCGGCGACCTGCCCGACATGGGCTACATCCTGGACAA
CAGCGTGCAGATGTGGTTCGATGAGGTGCACAACTCCAACGCCGGTATTA
TTGCCGGCGGATACCCATCCGGATATAACGGACCTGCCATTGGCCACTTC
ACCGTGATGATGTCGGAGAGGAACACCCGCTTGGGATGTGCTGCTGCTCG
GTACAATCGCGATGGATGGAACCAAGTGCTGGTGGCCTGCAACTATGCTA
CCACCAATATGATCGGACGCCAGATCTACTCCAGCTGTGACTGGGGAGCA
CAGGGCTGCGGATCGGGCACCAATGGCGAGTTTGGTAACCTCTGCTCAAC
ATCCGAGTGGTACGACGTGAACAGCTGGTAAAAGCTTTCTAGACCAT

BS15321.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:29:57
Subject Length Description Subject Range Query Range Score Percent Strand
Ag5r2-RA 765 CG9540-PA 1..765 17..781 3825 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:29:57
Subject Length Description Subject Range Query Range Score Percent Strand
Ag5r2-RA 849 CG9540-RA 47..812 17..782 3830 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:29:55
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14783489..14784006 534..17 2590 100 Minus
X 23542271 X 14782999..14783246 782..535 1240 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:29:56 has no hits.

BS15321.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:44 Download gff for BS15321.complete
Subject Subject Range Query Range Percent Splice Strand
Ag5r2-RA 37..799 17..779 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:29 Download gff for BS15321.complete
Subject Subject Range Query Range Percent Splice Strand
Ag5r2-RA 47..809 17..779 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:24:25 Download gff for BS15321.complete
Subject Subject Range Query Range Percent Splice Strand
Ag5r2-RA 37..799 17..779 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:30:18 Download gff for BS15321.complete
Subject Subject Range Query Range Percent Splice Strand
Ag5r2-RA 47..809 17..779 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:30:18 Download gff for BS15321.complete
Subject Subject Range Query Range Percent Splice Strand
X 14783002..14783246 535..779 100 <- Minus
X 14783489..14784006 17..534 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:29 Download gff for BS15321.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 14677035..14677279 535..779 100 <- Minus
arm_X 14677522..14678039 17..534 100   Minus

BS15321.3prime Sequence

763 bp (711 high quality bases) assembled on 2006-10-24

> BS15321.3prime
ATGGTCTAGAAAGCTTTTACCAGCTGTTCACGTCGTACCACTCGGATGTT
GAGCAGAGGTTACCAAACTCGCCATTGGTGCCCGATCCGCAGCCCTGTGC
TCCCCAGTCACAGCTGGAGTAGATCTGGCGTCCGATCATATTGGTGGTAG
CATAGTTGCAGGCCACCAGCACTTGGTTCCATCCATCGCGATTGTACCGA
GCAGCAGCACATCCCAAGCGGGTGTTCCTCTCCGACATCATCACGGTGAA
GTGGCCAATGGCAGGTCCGTTATATCCGGATGGGTATCCGCCGGCAATAA
TACCGGCGTTGGAGTTGTGCACCTCATCGAACCACATCTGCACGCTGTTG
TCCAGGATGTAGCCCATGTCGGGCAGGTCGCCGGAGTAGGCCTGCCATGC
CAGATTCTGGCCGGAGTACTTGAAGGCGTCGGTGTTGTGGCAGCTATCGT
GCACCATGTTGCACTGGCGCACATTCAGGGAGGCCAGATAGGCCAGCTCA
TCGTCCCACTCCATGGTGGCCATACGGCAGGCGGCATTGTGATTGGAATC
GTAGCCACCGGCAATGTAGTTCCTCTTGTCGTTGTGCGAGTGGACAAAGA
CCCACTTGTAGTCATCGTTGATGTCGATCAGCTCGGCATCGCCGGGACAG
CTACTGTCCCACCAGTTGCTATGCCCACAGGCGATGTGGGAGCCACCGTT
GCAGATGTCCGACGAACAATAGTCGGTGGCCTGGGCCAGGGCCAAGGAAA
CGATCAGGATGGC

BS15321.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:18:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG9540-PA 765 Ag5r2-RA 19..765 763..17 3735 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:08:52
Subject Length Description Subject Range Query Range Score Percent Strand
Ag5r2-RA 849 CG9540-RA 65..812 763..16 3740 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:08:47
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14783489..14783988 264..763 2500 100 Plus
X 23542271 X 14782999..14783246 16..263 1240 100 Plus
Blast to na_te.dros performed on 2015-02-13 07:08:50 has no hits.

BS15321.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:23:25 Download gff for BS15321.3prime
Subject Subject Range Query Range Percent Splice Strand
Ag5r2-PA 19..765 17..763 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:59:03 Download gff for BS15321.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9540-PA 19..765 17..763 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 20:51:11 Download gff for BS15321.3prime
Subject Subject Range Query Range Percent Splice Strand
Ag5r2-RA 65..815 12..763 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:29:53 Download gff for BS15321.3prime
Subject Subject Range Query Range Percent Splice Strand
Ag5r2-RA 65..815 12..763 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:29:53 Download gff for BS15321.3prime
Subject Subject Range Query Range Percent Splice Strand
X 14782996..14783246 12..263 99 <- Plus
X 14783489..14783988 264..763 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 20:51:11 Download gff for BS15321.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 14677029..14677279 12..263 99 <- Plus
arm_X 14677522..14678021 264..763 100   Plus

BS15321.5prime Sequence

731 bp (730 high quality bases) assembled on 2006-10-24

> BS15321.5prime
GAAGTTATCATTCGACATGAAACTCGCTCTGCTTGCCATCCTGATCGTTT
CCTTGGCCCTGGCCCAGGCCACCGACTATTGTTCGTCGGACATCTGCAAC
GGTGGCTCCCACATCGCCTGTGGGCATAGCAACTGGTGGGACAGTAGCTG
TCCCGGCGATGCCGAGCTGATCGACATCAACGATGACTACAAGTGGGTCT
TTGTCCACTCGCACAACGACAAGAGGAACTACATTGCCGGTGGCTACGAT
TCCAATCACAATGCCGCCTGCCGTATGGCCACCATGGAGTGGGACGATGA
GCTGGCCTATCTGGCCTCCCTGAATGTGCGCCAGTGCAACATGGTGCACG
ATAGCTGCCACAACACCGACGCCTTCAAGTACTCCGGCCAGAATCTGGCA
TGGCAGGCCTACTCCGGCGACCTGCCCGACATGGGCTACATCCTGGACAA
CAGCGTGCAGATGTGGTTCGATGAGGTGCACAACTCCAACGCCGGTATTA
TTGCCGGCGGATACCCATCCGGATATAACGGACCTGCCATTGGCCACTTC
ACCGTGATGATGTCGGAGAGGAACACCCGCTTGGGATGTGCTGCTGCTCG
GTACAATCGCGATGGATGGAACCAAGTGCTGGTGGCCTGCAACTATGCTA
CCACCAATATGATCGGACGCCAGATCTACTCCAGCTGTGACTGGGGAGCA
CAGGGCTGCGGATCGGGCACCAATGGCGAGT

BS15321.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:18:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG9540-PA 765 Ag5r2-RA 1..715 17..731 3575 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:52:56
Subject Length Description Subject Range Query Range Score Percent Strand
Ag5r2-RA 849 CG9540-RA 47..761 17..731 3575 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:52:52
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14783489..14784006 534..17 2590 100 Minus
X 23542271 X 14783050..14783246 731..535 985 100 Minus
Blast to na_te.dros performed on 2015-02-13 00:52:54 has no hits.

BS15321.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:23:26 Download gff for BS15321.5prime
Subject Subject Range Query Range Percent Splice Strand
Ag5r2-PA 1..715 17..731 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:59:05 Download gff for BS15321.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9540-PA 1..715 17..731 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:24:21 Download gff for BS15321.5prime
Subject Subject Range Query Range Percent Splice Strand
Ag5r2-RA 47..761 17..731 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:59:18 Download gff for BS15321.5prime
Subject Subject Range Query Range Percent Splice Strand
Ag5r2-RA 47..761 17..731 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:59:18 Download gff for BS15321.5prime
Subject Subject Range Query Range Percent Splice Strand
X 14783050..14783246 535..731 100 <- Minus
X 14783489..14784006 17..534 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:24:21 Download gff for BS15321.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 14677083..14677279 535..731 100 <- Minus
arm_X 14677522..14678039 17..534 100   Minus

BS15321.pep Sequence

Translation from 16 to 780

> BS15321.pep
MKLALLAILIVSLALAQATDYCSSDICNGGSHIACGHSNWWDSSCPGDAE
LIDINDDYKWVFVHSHNDKRNYIAGGYDSNHNAACRMATMEWDDELAYLA
SLNVRQCNMVHDSCHNTDAFKYSGQNLAWQAYSGDLPDMGYILDNSVQMW
FDEVHNSNAGIIAGGYPSGYNGPAIGHFTVMMSERNTRLGCAAARYNRDG
WNQVLVACNYATTNMIGRQIYSSCDWGAQGCGSGTNGEFGNLCSTSEWYD
VNSW*

BS15321.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:12:41
Subject Length Description Subject Range Query Range Score Percent Strand
Ag5r2-PA 254 CG9540-PA 1..254 1..254 1425 100 Plus
Ag5r-PC 256 CG9538-PC 10..253 9..253 637 50.4 Plus
Ag5r-PB 256 CG9538-PB 10..253 9..253 637 50.4 Plus
Ag5r-PA 256 CG9538-PA 10..253 9..253 637 50.4 Plus
CG32679-PA 254 CG32679-PA 10..252 5..254 465 38.2 Plus