Clone BS15325 Report

Search the DGRC for BS15325

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:153
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG1421-RA
Protein status:BS15325.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15325.3prime Sequence

597 bp (597 high quality bases) assembled on 2006-10-24

> BS15325.3prime
ATGGTCTAGAAAGCTTTTAATAAAAGTAGAACACATAAGATAGTTTTTCT
TTAAGCCACTGGGAAAAACCGACTTTTTTGGTAGTGCCCTTGGACTTATT
TTCTCCACGGTTTCCCATCAGCAGTTGATCGGAAATGATCGCGTTTCTTT
CATCCGCGGCATCGACAATAGCCATTCCTGTAGTTTCATTGTCAGGGGGA
TCGCCATTGCCCTCTGAGCATTGCTCCAGAAATTCACTGACGGCATTCTC
GGAAACGGGGTTCTCAGCTGTGACTTTTACGCGAATATCCCCGCCATATC
CAATTTTTTGGCCATCGTAGCTCAGCGCGATTCGGGCATCCTCCACGCTG
AAGTACTTCAGGTACATGCGATTGGTTTTCGTCAAGCTTTTGGCAACAAT
GCCACCGATATCGAGAAAGAAGCAGTAGACAATGTAAGCCCTGTCCAACT
CGTAGTCGCTTACGGATACCCAAAAAGACTGTCTGGGATCTTCGCCATAC
TTCTTTTTATTATCCTGCAAAATGGTATGGTCTGAATTGTTTCCAACGAC
TTGATGGAACGCCTTCCGCGACAGACCATCCATGTCGACTGATAACT

BS15325.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:18:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG1421-PA 567 CG1421-RA 1..567 583..17 2835 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:27:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG1421-RA 747 CG1421-RA 158..725 583..16 2840 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:27:23
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21903150..21903717 583..16 2840 100 Minus
Blast to na_te.dros performed on 2015-02-10 22:27:27 has no hits.

BS15325.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:23:30 Download gff for BS15325.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1421-PA 1..567 17..583 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:59:11 Download gff for BS15325.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1421-PA 1..567 17..583 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 11:22:12 Download gff for BS15325.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1421-RA 154..725 16..591 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:07:24 Download gff for BS15325.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1421-RA 154..725 16..591 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:07:24 Download gff for BS15325.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 21903146..21903717 16..591 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 11:22:12 Download gff for BS15325.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21903146..21903717 16..591 99   Minus

BS15325.5prime Sequence

597 bp (597 high quality bases) assembled on 2006-10-24

> BS15325.5prime
GAAGTTATCAGTCGACATGGATGGTCTGTCGCGGAAGGCGTTCCATCAAG
TCGTTGGAAACAATTCAGACCATACCATTTTGCAGGATAATAAAAAGAAG
TATGGCGAAGATCCCAGACAGTCTTTTTGGGTATCCGTAAGCGACTACGA
GTTGGACAGGGCTTACATTGTCTACTGCTTCTTTCTCGATATCGGTGGCA
TTGTTGCCAAAAGCTTGACGAAAACCAATCGCATGTACCTGAAGTACTTC
AGCGTGGAGGATGCCCGAATCGCGCTGAGCTACGATGGCCAAAAAATTGG
ATATGGCGGGGATATTCGCGTAAAAGTCACAGCTGAGAACCCCGTTTCCG
AGAATGCCGTCAGTGAATTTCTGGAGCAATGCTCAGAGGGCAATGGCGAT
CCCCCTGACAATGAAACTACAGGAATGGCTATTGTCGATGCCGCGGATGA
AAGAAACGCGATCATTTCCGATCAACTGCTGATGGGAAACCGTGGAGAAA
ATAAGTCCAAGGGCACTACCAAAAAAGTCGGTTTTTCCCAGTGGCTTAAA
GAAAAACTATCTTATGTGTTCTACTTTTATTAAAAGCTTTCTAGACC

BS15325.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:18:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG1421-PA 567 CG1421-RA 1..567 17..583 2835 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:40:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG1421-RA 747 CG1421-RA 158..725 17..584 2840 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:40:10
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21903150..21903717 17..584 2840 100 Plus
Blast to na_te.dros performed on 2015-02-11 17:40:13 has no hits.

BS15325.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:23:31 Download gff for BS15325.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1421-PA 1..567 17..583 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:59:12 Download gff for BS15325.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1421-PA 1..567 17..583 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:54:37 Download gff for BS15325.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1421-RA 154..725 9..584 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:27:32 Download gff for BS15325.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1421-RA 154..725 9..584 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:27:32 Download gff for BS15325.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 21903146..21903717 9..584 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:54:37 Download gff for BS15325.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21903146..21903717 9..584 99   Plus

BS15325.complete Sequence

599 bp assembled on 2006-11-01

> BS15325.complete
GAAGTTATCAGTCGACATGGATGGTCTGTCGCGGAAGGCGTTCCATCAAG
TCGTTGGAAACAATTCAGACCATACCATTTTGCAGGATAATAAAAAGAAG
TATGGCGAAGATCCCAGACAGTCTTTTTGGGTATCCGTAAGCGACTACGA
GTTGGACAGGGCTTACATTGTCTACTGCTTCTTTCTCGATATCGGTGGCA
TTGTTGCCAAAAGCTTGACGAAAACCAATCGCATGTACCTGAAGTACTTC
AGCGTGGAGGATGCCCGAATCGCGCTGAGCTACGATGGCCAAAAAATTGG
ATATGGCGGGGATATTCGCGTAAAAGTCACAGCTGAGAACCCCGTTTCCG
AGAATGCCGTCAGTGAATTTCTGGAGCAATGCTCAGAGGGCAATGGCGAT
CCCCCTGACAATGAAACTACAGGAATGGCTATTGTCGATGCCGCGGATGA
AAGAAACGCGATCATTTCCGATCAACTGCTGATGGGAAACCGTGGAGAAA
ATAAGTCCAAGGGCACTACCAAAAAAGTCGGTTTTTCCCAGTGGCTTAAA
GAAAAACTATCTTATGTGTTCTACTTTTATTAAAAGCTTTCTAGACCAT

BS15325.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:15:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG1421-RA 567 CG1421-PA 1..567 17..583 2835 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:15:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG1421-RA 747 CG1421-RA 158..725 17..584 2840 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:15:23
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21903150..21903717 17..584 2840 100 Plus
Blast to na_te.dros performed on 2014-11-27 15:15:24 has no hits.

BS15325.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:33:04 Download gff for BS15325.complete
Subject Subject Range Query Range Percent Splice Strand
CG1421-RA 1..567 17..583 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:05:39 Download gff for BS15325.complete
Subject Subject Range Query Range Percent Splice Strand
CG1421-RA 85..656 9..584 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:45:17 Download gff for BS15325.complete
Subject Subject Range Query Range Percent Splice Strand
CG1421-RA 158..722 17..581 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:33:04 Download gff for BS15325.complete
Subject Subject Range Query Range Percent Splice Strand
CG1421-RA 85..656 9..584 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:03:26 Download gff for BS15325.complete
Subject Subject Range Query Range Percent Splice Strand
CG1421-RA 158..722 17..581 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:03:26 Download gff for BS15325.complete
Subject Subject Range Query Range Percent Splice Strand
2L 21903150..21903714 17..581 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:45:17 Download gff for BS15325.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21903150..21903714 17..581 100   Plus

BS15325.pep Sequence

Translation from 16 to 582

> BS15325.pep
MDGLSRKAFHQVVGNNSDHTILQDNKKKYGEDPRQSFWVSVSDYELDRAY
IVYCFFLDIGGIVAKSLTKTNRMYLKYFSVEDARIALSYDGQKIGYGGDI
RVKVTAENPVSENAVSEFLEQCSEGNGDPPDNETTGMAIVDAADERNAII
SDQLLMGNRGENKSKGTTKKVGFSQWLKEKLSYVFYFY*

BS15325.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:00:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG1421-PA 188 CG1421-PA 1..188 1..188 985 100 Plus