Clone Sequence Records
BS15325.3prime Sequence
597 bp (597 high quality bases) assembled on 2006-10-24
> BS15325.3prime
ATGGTCTAGAAAGCTTTTAATAAAAGTAGAACACATAAGATAGTTTTTCT
TTAAGCCACTGGGAAAAACCGACTTTTTTGGTAGTGCCCTTGGACTTATT
TTCTCCACGGTTTCCCATCAGCAGTTGATCGGAAATGATCGCGTTTCTTT
CATCCGCGGCATCGACAATAGCCATTCCTGTAGTTTCATTGTCAGGGGGA
TCGCCATTGCCCTCTGAGCATTGCTCCAGAAATTCACTGACGGCATTCTC
GGAAACGGGGTTCTCAGCTGTGACTTTTACGCGAATATCCCCGCCATATC
CAATTTTTTGGCCATCGTAGCTCAGCGCGATTCGGGCATCCTCCACGCTG
AAGTACTTCAGGTACATGCGATTGGTTTTCGTCAAGCTTTTGGCAACAAT
GCCACCGATATCGAGAAAGAAGCAGTAGACAATGTAAGCCCTGTCCAACT
CGTAGTCGCTTACGGATACCCAAAAAGACTGTCTGGGATCTTCGCCATAC
TTCTTTTTATTATCCTGCAAAATGGTATGGTCTGAATTGTTTCCAACGAC
TTGATGGAACGCCTTCCGCGACAGACCATCCATGTCGACTGATAACT
BS15325.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:18:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1421-PA | 567 | CG1421-RA | 1..567 | 583..17 | 2835 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:27:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1421-RA | 747 | CG1421-RA | 158..725 | 583..16 | 2840 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:27:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 21903150..21903717 | 583..16 | 2840 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 22:27:27 has no hits.
BS15325.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:23:30 Download gff for
BS15325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-PA | 1..567 | 17..583 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:59:11 Download gff for
BS15325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-PA | 1..567 | 17..583 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 11:22:12 Download gff for
BS15325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-RA | 154..725 | 16..591 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:07:24 Download gff for
BS15325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-RA | 154..725 | 16..591 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:07:24 Download gff for
BS15325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21903146..21903717 | 16..591 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 11:22:12 Download gff for
BS15325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 21903146..21903717 | 16..591 | 99 | | Minus |
BS15325.5prime Sequence
597 bp (597 high quality bases) assembled on 2006-10-24
> BS15325.5prime
GAAGTTATCAGTCGACATGGATGGTCTGTCGCGGAAGGCGTTCCATCAAG
TCGTTGGAAACAATTCAGACCATACCATTTTGCAGGATAATAAAAAGAAG
TATGGCGAAGATCCCAGACAGTCTTTTTGGGTATCCGTAAGCGACTACGA
GTTGGACAGGGCTTACATTGTCTACTGCTTCTTTCTCGATATCGGTGGCA
TTGTTGCCAAAAGCTTGACGAAAACCAATCGCATGTACCTGAAGTACTTC
AGCGTGGAGGATGCCCGAATCGCGCTGAGCTACGATGGCCAAAAAATTGG
ATATGGCGGGGATATTCGCGTAAAAGTCACAGCTGAGAACCCCGTTTCCG
AGAATGCCGTCAGTGAATTTCTGGAGCAATGCTCAGAGGGCAATGGCGAT
CCCCCTGACAATGAAACTACAGGAATGGCTATTGTCGATGCCGCGGATGA
AAGAAACGCGATCATTTCCGATCAACTGCTGATGGGAAACCGTGGAGAAA
ATAAGTCCAAGGGCACTACCAAAAAAGTCGGTTTTTCCCAGTGGCTTAAA
GAAAAACTATCTTATGTGTTCTACTTTTATTAAAAGCTTTCTAGACC
BS15325.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:18:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1421-PA | 567 | CG1421-RA | 1..567 | 17..583 | 2835 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:40:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1421-RA | 747 | CG1421-RA | 158..725 | 17..584 | 2840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:40:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 21903150..21903717 | 17..584 | 2840 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 17:40:13 has no hits.
BS15325.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:23:31 Download gff for
BS15325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-PA | 1..567 | 17..583 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:59:12 Download gff for
BS15325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-PA | 1..567 | 17..583 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:54:37 Download gff for
BS15325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-RA | 154..725 | 9..584 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:27:32 Download gff for
BS15325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-RA | 154..725 | 9..584 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:27:32 Download gff for
BS15325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21903146..21903717 | 9..584 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:54:37 Download gff for
BS15325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 21903146..21903717 | 9..584 | 99 | | Plus |
BS15325.complete Sequence
599 bp assembled on 2006-11-01
> BS15325.complete
GAAGTTATCAGTCGACATGGATGGTCTGTCGCGGAAGGCGTTCCATCAAG
TCGTTGGAAACAATTCAGACCATACCATTTTGCAGGATAATAAAAAGAAG
TATGGCGAAGATCCCAGACAGTCTTTTTGGGTATCCGTAAGCGACTACGA
GTTGGACAGGGCTTACATTGTCTACTGCTTCTTTCTCGATATCGGTGGCA
TTGTTGCCAAAAGCTTGACGAAAACCAATCGCATGTACCTGAAGTACTTC
AGCGTGGAGGATGCCCGAATCGCGCTGAGCTACGATGGCCAAAAAATTGG
ATATGGCGGGGATATTCGCGTAAAAGTCACAGCTGAGAACCCCGTTTCCG
AGAATGCCGTCAGTGAATTTCTGGAGCAATGCTCAGAGGGCAATGGCGAT
CCCCCTGACAATGAAACTACAGGAATGGCTATTGTCGATGCCGCGGATGA
AAGAAACGCGATCATTTCCGATCAACTGCTGATGGGAAACCGTGGAGAAA
ATAAGTCCAAGGGCACTACCAAAAAAGTCGGTTTTTCCCAGTGGCTTAAA
GAAAAACTATCTTATGTGTTCTACTTTTATTAAAAGCTTTCTAGACCAT
BS15325.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:15:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1421-RA | 567 | CG1421-PA | 1..567 | 17..583 | 2835 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:15:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1421-RA | 747 | CG1421-RA | 158..725 | 17..584 | 2840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:15:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 21903150..21903717 | 17..584 | 2840 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:15:24 has no hits.
BS15325.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:33:04 Download gff for
BS15325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-RA | 1..567 | 17..583 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:05:39 Download gff for
BS15325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-RA | 85..656 | 9..584 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:45:17 Download gff for
BS15325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-RA | 158..722 | 17..581 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:33:04 Download gff for
BS15325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-RA | 85..656 | 9..584 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:03:26 Download gff for
BS15325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-RA | 158..722 | 17..581 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:03:26 Download gff for
BS15325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21903150..21903714 | 17..581 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:45:17 Download gff for
BS15325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 21903150..21903714 | 17..581 | 100 | | Plus |
BS15325.pep Sequence
Translation from 16 to 582
> BS15325.pep
MDGLSRKAFHQVVGNNSDHTILQDNKKKYGEDPRQSFWVSVSDYELDRAY
IVYCFFLDIGGIVAKSLTKTNRMYLKYFSVEDARIALSYDGQKIGYGGDI
RVKVTAENPVSENAVSEFLEQCSEGNGDPPDNETTGMAIVDAADERNAII
SDQLLMGNRGENKSKGTTKKVGFSQWLKEKLSYVFYFY*
BS15325.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:00:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1421-PA | 188 | CG1421-PA | 1..188 | 1..188 | 985 | 100 | Plus |